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3E51
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Crystal structure of HCV NS5B polymerase with a novel pyridazinone inhibitor
分子名称: N-{3-[5-hydroxy-2-(3-methylbutyl)-3-oxo-6-pyrrolidin-1-yl-2,3-dihydropyridazin-4-yl]-1,1-dioxido-2H-1,2,4-benzothiadiazin-7-yl}methanesulfonamide, RNA-directed RNA polymerase
著者Han, Q, Showalter, R.E, Zhao, Q, Kissinger, C.R.
登録日2008-08-12
公開日2009-08-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel HCV NS5B polymerase inhibitors derived from 4-(1',1'-dioxo-1',4'-dihydro-1'lambda(6)-benzo[1',2',4']thiadiazin-3'-yl)-5-hydroxy-2H-pyridazin-3-ones. Part 5: Exploration of pyridazinones containing 6-amino-substituents.
Bioorg.Med.Chem.Lett., 18, 2008
3HKY
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BU of 3hky by Molmil
HCV NS5B polymerase genotype 1b in complex with 1,5 benzodiazepine 6
分子名称: (11S)-10-[(2,5-dimethyl-1,3-oxazol-4-yl)carbonyl]-11-{2-fluoro-4-[(2-methylprop-2-en-1-yl)oxy]phenyl}-3,3-dimethyl-2,3,4,5,10,11-hexahydrothiopyrano[3,2-b][1,5]benzodiazepin-6-ol 1,1-dioxide, CHLORIDE ION, RNA-directed RNA polymerase, ...
著者Nyanguile, O, De Bondt, H.L.
登録日2009-05-26
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献1a/1b subtype profiling of nonnucleoside polymerase inhibitors of hepatitis C virus
J.Virol., 84, 2010
5T2T
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BU of 5t2t by Molmil
Crystal structure of Lymphocytic choriomeningitis mammarenavirus endonuclease bound to compound L742001
分子名称: (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid, CHLORIDE ION, GLYCEROL, ...
著者Saez-Ayala, M, Yekwa, E.L, Canard, B, Alvarez, K, Ferron, F.
登録日2016-08-24
公開日2017-09-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.967 Å)
主引用文献Crystal structures ofLymphocytic choriomeningitis virusendonuclease domain complexed with diketo-acid ligands.
IUCrJ, 5, 2018
2E9Z
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BU of 2e9z by Molmil
Foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, ATP and UTP
分子名称: 5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3', 5'-R(*GP*GP*GP*CP*CP*CP*A)-3', MAGNESIUM ION, ...
著者Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
登録日2007-01-29
公開日2007-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007
7DFG
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BU of 7dfg by Molmil
Structure of COVID-19 RNA-dependent RNA polymerase bound to favipiravir
分子名称: 6-fluoro-3-oxo-4-(5-O-phosphono-beta-D-ribofuranosyl)-3,4-dihydropyrazine-2-carboxamide, MAGNESIUM ION, Non-structural protein 7, ...
著者Li, Z, Zhou, Z, Yu, X.
登録日2020-11-08
公開日2021-11-17
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis for repurpose and design of nucleotide drugs for treating COVID-19
To Be Published
7DOK
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BU of 7dok by Molmil
Structure of COVID-19 RNA-dependent RNA polymerase (extended conformation) bound to penciclovir
分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
著者Li, Z, Yu, X.
登録日2020-12-14
公開日2021-12-15
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Structural basis for repurpose and design of nucleotide drugs for treating COVID-19
To Be Published
7DOI
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Structure of COVID-19 RNA-dependent RNA polymerase bound to penciclovir.
分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
著者Li, Z, Yu, X.
登録日2020-12-14
公開日2021-12-15
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for repurpose and design of nucleotide drugs for treating COVID-19
To Be Published
4MIW
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BU of 4miw by Molmil
High-resolution structure of the N-terminal endonuclease domain of the Lassa virus L polymerase
分子名称: MAGNESIUM ION, RNA-directed RNA polymerase L
著者Wallat, G.D, Huang, Q, Wang, W, Dong, H, Ly, H, Liang, Y, Dong, C.
登録日2013-09-02
公開日2014-03-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献High-resolution structure of the N-terminal endonuclease domain of the lassa virus L polymerase in complex with magnesium ions.
Plos One, 9, 2014
2R7R
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BU of 2r7r by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC) complex
分子名称: RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3'), RNA-dependent RNA polymerase
著者Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
登録日2007-09-09
公開日2008-07-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7T
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BU of 2r7t by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGAACC) Complex
分子名称: RNA (5'-R(*UP*GP*UP*GP*AP*AP*CP*C)-3'), RNA-dependent RNA polymerase
著者Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
登録日2007-09-10
公開日2008-07-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7S
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BU of 2r7s by Molmil
Crystal Structure of Rotavirus SA11 VP1 / RNA (UGUGCC) complex
分子名称: PHOSPHATE ION, RNA (5'-R(*UP*GP*UP*GP*CP*C)-3'), RNA-dependent RNA polymerase
著者Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
登録日2007-09-10
公開日2008-07-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7V
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BU of 2r7v by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (GGCUUU) Complex
分子名称: RNA (5'-R(*G*GP*CP*UP*UP*U)-3'), RNA-dependent RNA polymerase
著者Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
登録日2007-09-10
公開日2008-07-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7U
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BU of 2r7u by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (AAAAGCC) Complex
分子名称: RNA (5'-R(*AP*A*AP*AP*GP*CP*C)-3'), RNA-dependent RNA polymerase
著者Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
登録日2007-09-10
公開日2008-07-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7X
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BU of 2r7x by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/GTP complex
分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3'), RNA-dependent RNA polymerase
著者Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
登録日2007-09-10
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
8B51
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BU of 8b51 by Molmil
Usutu virus methyltransferase domain in complex with sinefungin
分子名称: GLYCEROL, GLYCINE, RNA-directed RNA polymerase NS5, ...
著者Ferrero, D.S, Albentosa Gonzalez, L, Mas, A, Verdaguer, N.
登録日2022-09-21
公開日2023-10-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structure and function of the NS5 methyltransferase domain from Usutu virus.
Antiviral Res., 208, 2022
3J9B
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BU of 3j9b by Molmil
Electron cryo-microscopy of an RNA polymerase
分子名称: Polymerase, Polymerase basic protein 2, RNA (5'-R(*UP*UP*UP*UP*UP*A)-3'), ...
著者Chang, S.H, Sun, D.P, Liang, H.H, Wang, J, Li, J, Guo, L, Wang, X.L, Guan, C.C, Boruah, B.M, Yuan, L.M, Feng, F, Yang, M.R, Wojdyla, J, Wang, J.W, Wang, M.T, Wang, H.W, Liu, Y.F.
登録日2014-12-16
公開日2015-02-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM Structure of Influenza Virus RNA Polymerase Complex at 4.3 angstrom Resolution.
Mol.Cell, 2015
7ELH
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BU of 7elh by Molmil
In situ structure of transcriptional enzyme complex and capsid shell protein of mammalian reovirus at initiation state
分子名称: Lambda 1, Minor core protein mu2, PHOSPHATE ION, ...
著者Zhou, Z.H, Pan, M.
登録日2021-04-11
公開日2021-10-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu2 and capsid proteins.
Nat Commun, 12, 2021
8VPU
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BU of 8vpu by Molmil
Crystal structure of mouse Importin alpha in complex with dengue virus 3 NS5 central NLS peptide
分子名称: Importin subunit alpha-1, RNA-directed RNA polymerase NS5 central NLS peptide
著者Roman, N, Swarbrick, C.M.D, Forwood, J.K.
登録日2024-01-17
公開日2024-08-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Serotype-Specific Regulation of Dengue Virus NS5 Protein Subcellular Localization.
Acs Infect Dis., 10, 2024
8VPR
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BU of 8vpr by Molmil
Crystal structure of mouse Importin alpha in complex with Dengue 1 NS5 central NLS peptide
分子名称: Importin subunit alpha-1, RNA-directed RNA polymerase NS5 central NLS peptide
著者Cheng, C.X, Swarbrick, C.M.D, Forward, J.K.
登録日2024-01-16
公開日2024-08-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Serotype-Specific Regulation of Dengue Virus NS5 Protein Subcellular Localization.
Acs Infect Dis., 10, 2024
7D6N
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BU of 7d6n by Molmil
Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase
分子名称: MAGNESIUM ION, Tick-borne encephalitis virus RNA-dependent RNA polymerase, ZINC ION
著者Yang, J, Jing, X, Gong, P.
登録日2020-10-01
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.168 Å)
主引用文献Crystal structure of tick-borne encephalitis virus
Nucleic Acids Res., 2020
7CXM
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BU of 7cxm by Molmil
Architecture of a SARS-CoV-2 mini replication and transcription complex
分子名称: Helicase, Non-structural protein 7, Non-structural protein 8, ...
著者Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
登録日2020-09-02
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
7MY5
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BU of 7my5 by Molmil
The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988503
分子名称: 5-hydroxy-N-[2-(4-hydroxy-3-methoxyphenyl)ethyl]-2-(2-methylphenyl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
著者Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
登録日2021-05-20
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988503
To Be Published
7CXN
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Architecture of a SARS-CoV-2 mini replication and transcription complex
分子名称: Helicase, Non-structural protein 7, Non-structural protein 8, ...
著者Yan, L, Zhang, Y, Ge, J, Zheng, L, Gao, Y, Wang, T, Jia, Z, Wang, H, Huang, Y, Li, M, Wang, Q, Rao, Z, Lou, Z.
登録日2020-09-02
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Architecture of a SARS-CoV-2 mini replication and transcription complex.
Nat Commun, 11, 2020
4AEP
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HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 1.8 ANGSTROM
分子名称: PHOSPHATE ION, RNA-DIRECTED RNA POLYMERASE
著者Caillet-Saguy, C, Bressanelli, S.
登録日2012-01-12
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Two Crucial Early Steps in RNA Synthesis by the Hepatitis C Virus Polymerase Involve a Dual Role of Residue 405.
J.Virol., 86, 2012
4AEX
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HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 2.4 ANGSTROM in a primitive orthorhombic space group
分子名称: PHOSPHATE ION, RNA-DIRECTED RNA POLYMERASE
著者Caillet-Saguy, C, Bressanelli, S.
登録日2012-01-12
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Two Crucial Early Steps in RNA Synthesis by the Hepatitis C Virus Polymerase Involve a Dual Role of Residue 405.
J.Virol., 86, 2012

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