PDB: 196 件ウェブページステータス検索Chemie searchBIRD

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6RNZ	Crystal structure of the N-terminal HTH DNA-binding domain of the essential repressor DdrO from radiation-resistant Deinococcus bacteria (Deinococcus deserti) 分子名称: GLYCEROL, HTH-type transcriptional regulator DdrOC 著者 Arnoux, P, Siponen, M.I, Pignol, D, Brandelet, G, De Groot, A, Blanchard, L. 登録日 2019-05-10 公開日 2019-10-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus. Nucleic Acids Res., 47, 2019
5TN0	Solution Structure of the N-terminal DNA-binding domain of the master biofilm-regulator SinR from Bacillus subtilis 分子名称: HTH-type transcriptional regulator SinR 著者 Draughn, G.L, Bobay, B.G, Stowe, S.D, Thompson, R.J, Cavanagh, J. 登録日 2016-10-13 公開日 2017-10-25 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The Solution Structures and Interaction of SinR and SinI: Elucidating the Mechanism of Action of the Master Regulator Switch for Biofilm Formation in Bacillus subtilis. J.Mol.Biol., 2019
1PER	THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES 分子名称: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*GP*TP*TP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*AP*AP*CP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 REPRESSOR) 著者 Rodgers, D.W, Harrison, S.C. 登録日 1993-11-09 公開日 1994-01-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites. Structure, 1, 1993
6B9T	Crystal structure of MPnS with substrate 2-hydroxyethylphosphonate (2-HEP) and Fe(II) bound 分子名称: (2-hydroxyethyl)phosphonic acid, FE (III) ION, FORMIC ACID, ... 著者 Born, D.A, Drennan, C.L. 登録日 2017-10-11 公開日 2017-12-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural basis for methylphosphonate biosynthesis. Science, 358, 2017
6B9S	MPnS crystallized in the absence of substrate 分子名称: FE (III) ION, Methylphosphonate synthase 著者 Born, D.A, Drennan, C.L. 登録日 2017-10-11 公開日 2017-12-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.373 Å) 主引用文献 Structural basis for methylphosphonate biosynthesis. Science, 358, 2017
6CF1	Proteus vulgaris HigA antitoxin structure 分子名称: Antitoxin HigA, POTASSIUM ION 著者 Schureck, M.A, Hoffer, E.D, Ei Cho, S, Dunham, C.M. 登録日 2018-02-13 公開日 2019-02-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis of transcriptional regulation by the HigA antitoxin. Mol.Microbiol., 111, 2019
1PRA	DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN (RESIDUES 1 TO 69) OF THE 434 REPRESSOR AND COMPARISON WITH THE X-RAY CRYSTAL STRUCTURE 分子名称: 434 REPRESSOR 著者 Neri, D, Billeter, M, Wuthrich, K. 登録日 1991-11-18 公開日 1993-10-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Determination of the nuclear magnetic resonance solution structure of the DNA-binding domain (residues 1 to 69) of the 434 repressor and comparison with the X-ray crystal structure. J.Mol.Biol., 223, 1992
1RPE	THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION 分子名称: DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*AP*GP*AP*TP*AP*CP*AP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*TP*GP*TP*AP*TP*CP*TP*TP*GP*T P*TP*TP*G)-3'), PROTEIN (434 REPRESSOR) 著者 Shimon, L.J.W, Harrison, S.C. 登録日 1993-03-24 公開日 1994-01-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The phage 434 OR2/R1-69 complex at 2.5 A resolution. J.Mol.Biol., 232, 1993
6CHV	Proteus vulgaris HigA antitoxin bound to DNA 分子名称: Antitoxin HigA, MAGNESIUM ION, pHigCryst3, ... 著者 Schureck, M.A, Hoffer, E.D, Onuoha, N, Dunham, C.M. 登録日 2018-02-23 公開日 2019-02-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis of transcriptional regulation by the HigA antitoxin. Mol.Microbiol., 111, 2019
1SQ8	a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES 分子名称: dh434 著者 Iwai, H, Wider, G, Wuthrich, K. 登録日 2004-03-18 公開日 2004-07-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 NMR Structure of a Variant 434 Repressor DNA-binding Domain Devoid of Hydroxyl Groups J.Biomol.Nmr, 29, 2004
6RMQ	Crystal structure of a selenomethionine-substituted A70M I84M mutant of the essential repressor DdrO from radiation resistant-Deinococcus bacteria (Deinococcus deserti) 分子名称: HTH-type transcriptional regulator DdrOC 著者 Arnoux, P, Siponen, M.I, Pignol, D, De Groot, A, Blanchard, L. 登録日 2019-05-07 公開日 2019-10-09 最終更新日 2019-12-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus. Nucleic Acids Res., 47, 2019
1UTX	Regulation of Cytolysin Expression by Enterococcus faecalis: Role of CylR2 分子名称: CYLR2, IODIDE ION, SODIUM ION 著者 Razeto, A, Rumpel, S, Pillar, C.M, Gilmore, M.S, Becker, S, Zweckstetter, M. 登録日 2003-12-12 公開日 2004-09-16 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure and DNA-Binding Properties of the Cytolysin Regulator CylR2 from Enterococcus Faecalis Embo J., 23, 2004
5WOQ	Crystal structure of an XRE family protein transcriptional regulator from Mycobacterium smegmatis 分子名称: Transcriptional regulator ClgR 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2017-08-02 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of an XRE family protein transcriptional regulator from Mycobacterium smegmatis To Be Published
1R69	STRUCTURE OF THE AMINO-TERMINAL DOMAIN OF PHAGE 434 REPRESSOR AT 2.0 ANGSTROMS RESOLUTION 分子名称: REPRESSOR PROTEIN CI 著者 Mondragon, A, Subbiah, S, Alamo, S.C, Drottar, M, Harrison, S.C. 登録日 1988-12-08 公開日 1989-10-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the amino-terminal domain of phage 434 repressor at 2.0 A resolution. J.Mol.Biol., 205, 1989
1R63	STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES 分子名称: REPRESSOR PROTEIN FROM BACTERIOPHAGE 434 著者 Pervushin, K.V, Billeter, M, Siegal, G, Wuthrich, K. 登録日 1996-11-08 公開日 1997-06-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural role of a buried salt bridge in the 434 repressor DNA-binding domain. J.Mol.Biol., 264, 1996
4IWR	C.Esp1396I bound to a 25 base pair operator site 分子名称: DNA (25-MER), Regulatory protein 著者 Martin, R.N.A, McGeehan, J.E, Ball, N.J, Streeter, S.D, Thresh, S.-J, Kneale, G.G. 登録日 2013-01-24 公開日 2013-09-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural analysis of DNA-protein complexes regulating the restriction-modification system Esp1396I. Acta Crystallogr.,Sect.F, 69, 2013
4PU8	Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 2.35 分子名称: Toxin-antitoxin system antidote transcriptional repressor Xre family 著者 Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S. 登録日 2014-03-12 公開日 2014-08-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. Nucleic Acids Res., 42, 2014
3JXC	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+ 分子名称: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2, THALLIUM (I) ION 著者 Watkins, D, Koudelka, G.B, Williams, L.D. 登録日 2009-09-18 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Sequence Recognition of DNA by Protein-Induced Conformational Transitions. J.Mol.Biol., 396, 2010
4OB4	Structure of the S. venezulae BldD DNA-binding domain 分子名称: Putative DNA-binding protein 著者 schumacher, M.A, Tschowri, N, Buttner, M, Brennan, R. 登録日 2014-01-06 公開日 2014-11-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces development. Cell(Cambridge,Mass.), 158, 2014
3JXB	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C 分子名称: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*A)-3', 5'-D(*TP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2 著者 Watkins, D, Koudelka, G.B, Williams, L.D. 登録日 2009-09-18 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Sequence Recognition of DNA by Protein-Induced Conformational Transitions J.Mol.Biol., 396, 2010
3JXD	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+ 分子名称: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', RUBIDIUM ION, Repressor protein C2 著者 Watkins, D, Koudelka, G.B, Williams, L.D. 登録日 2009-09-18 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Sequence Recognition of DNA by Protein-Induced Conformational Transitions. J.Mol.Biol., 396, 2010
4PU7	Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 1.85 分子名称: Toxin-antitoxin system antidote transcriptional repressor Xre family 著者 Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S. 登録日 2014-03-12 公開日 2014-08-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. Nucleic Acids Res., 42, 2014
2XI8	High resolution structure of native CylR2 分子名称: GLYCEROL, PUTATIVE TRANSCRIPTION REGULATOR 著者 Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S. 登録日 2010-06-28 公開日 2011-02-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.21 Å) 主引用文献 Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy. J.Biomol.NMR, 49, 2011
3S8Q	Crystal structure of the R-M controller protein C.Esp1396I OL operator complex 分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*AP*CP*TP*TP*AP*TP*AP*GP*TP*CP*CP*GP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*GP*AP*CP*TP*AP*TP*AP*AP*GP*TP*CP*AP*CP*A)-3'), R-M CONTROLLER PROTEIN 著者 McGeehan, J.E, Ball, N.J, Streeter, S.D, Thresh, S.-J, Kneale, G.G. 登録日 2011-05-30 公開日 2012-01-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex. Nucleic Acids Res., 40, 2012
2XIU	High resolution structure of MTSL-tagged CylR2. 分子名称: CYLR2, GLYCEROL, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate 著者 Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S. 登録日 2010-07-01 公開日 2011-02-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy. J.Biomol.NMR, 49, 2011

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