PDB: 201 件ウェブページステータス検索Chemie searchBIRD

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2R63	STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES 分子名称: REPRESSOR PROTEIN FROM BACTERIOPHAGE 434 著者 Pervushin, K.V, Billeter, M, Siegal, G, Wuthrich, K. 登録日 1996-11-13 公開日 1997-06-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural role of a buried salt bridge in the 434 repressor DNA-binding domain. J.Mol.Biol., 264, 1996
7N10	Co-crystal structure of Prx with ComR DNA binding domain 分子名称: ComR, Prx 著者 Rutbeek, N.R, Prehna, G. 登録日 2021-05-26 公開日 2021-07-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Molecular mechanism of quorum sensing inhibition in Streptococcus by the phage protein paratox. J.Biol.Chem., 297, 2021
7N1N	Prx in complex with ComR DNA-binding domain 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ComR, Prx 著者 Rutbeek, N.R, Prehna, G. 登録日 2021-05-27 公開日 2021-07-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Molecular mechanism of quorum sensing inhibition in Streptococcus by the phage protein paratox. J.Biol.Chem., 297, 2021
1LLI	THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING 分子名称: DNA (5'-D(*AP*AP*TP*AP*CP*CP*AP*CP*TP*GP*GP*CP*GP*GP*TP*GP*A P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*TP*CP*AP*CP*CP*GP*CP*CP*AP*GP*TP*GP*G P*TP*AP*T)-3'), PROTEIN (LAMBDA REPRESSOR) 著者 Lim, W.A, Hodel, A, Sauer, R.T, Richards, F.M. 登録日 1994-03-25 公開日 1994-08-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The crystal structure of a mutant protein with altered but improved hydrophobic core packing. Proc.Natl.Acad.Sci.USA, 91, 1994
2XCJ	Crystal structure of P2 C, the immunity repressor of temperate E. coli phage P2 分子名称: C PROTEIN, FORMIC ACID, GLYCEROL, ... 著者 Massad, T, Skaar, K, Hogbom, M, Stenmark, P. 登録日 2010-04-23 公開日 2010-07-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of the P2 C-Repressor: A Binder of Non-Palindromic Direct DNA Repeats. Nucleic Acids Res., 38, 2010
1LMB	REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX 分子名称: DNA (5'-D(*AP*AP*TP*AP*CP*CP*AP*CP*TP*GP*GP*CP*GP*GP*TP*GP*A P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*TP*CP*AP*CP*CP*GP*CP*CP*AP*GP*TP*GP*G P*TP*AP*T)-3'), PROTEIN (LAMBDA REPRESSOR) 著者 Beamer, L.J, Pabo, C.O. 登録日 1991-11-05 公開日 1991-11-05 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Refined 1.8 A crystal structure of the lambda repressor-operator complex. J.Mol.Biol., 227, 1992
1LRP	COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS FROM BACTERIOPHAGE LAMBDA 分子名称: LAMBDA REPRESSOR 著者 Pabo, C, Lewis, M. 登録日 1987-12-04 公開日 1989-01-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Comparison of the structures of cro and lambda repressor proteins from bacteriophage lambda. J.Mol.Biol., 169, 1983
4X4F	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 20.6 MGy 分子名称: 35-MER DNA, Regulatory protein 著者 Bury, C.S, McGeehan, J.E, Garman, E.F. 登録日 2014-12-02 公開日 2015-03-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Radiation damage to nucleoprotein complexes in macromolecular crystallography. J.Synchrotron Radiat., 22, 2015
4X4H	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 35.7 MGy 分子名称: 35-MER DNA, Regulatory protein 著者 Bury, C.S, McGeehan, J.E, Garman, E.F. 登録日 2014-12-02 公開日 2015-03-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Radiation damage to nucleoprotein complexes in macromolecular crystallography. J.Synchrotron Radiat., 22, 2015
6RNX	Crystal structure of the essential repressor DdrO from radiation-resistant Deinococcus bacteria (Deinococcus deserti) 分子名称: CHLORIDE ION, HTH-type transcriptional regulator DdrOC 著者 Arnoux, P, Siponen, M.I, Pignol, D, De Groot, A, Blanchard, L. 登録日 2019-05-09 公開日 2019-10-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus. Nucleic Acids Res., 47, 2019
6RNZ	Crystal structure of the N-terminal HTH DNA-binding domain of the essential repressor DdrO from radiation-resistant Deinococcus bacteria (Deinococcus deserti) 分子名称: GLYCEROL, HTH-type transcriptional regulator DdrOC 著者 Arnoux, P, Siponen, M.I, Pignol, D, Brandelet, G, De Groot, A, Blanchard, L. 登録日 2019-05-10 公開日 2019-10-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus. Nucleic Acids Res., 47, 2019
4X4D	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 10.3 MGy 分子名称: 35-MER DNA, Regulatory protein 著者 Bury, C.S, McGeehan, J.E, Garman, E.F. 登録日 2014-12-02 公開日 2015-03-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Radiation damage to nucleoprotein complexes in macromolecular crystallography. J.Synchrotron Radiat., 22, 2015
4X4B	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 2.1 MGy 分子名称: 35-MER DNA, MAGNESIUM ION, Regulatory protein 著者 Bury, C.S, McGeehan, J.E, Garman, E.F. 登録日 2014-12-02 公開日 2015-03-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Radiation damage to nucleoprotein complexes in macromolecular crystallography. J.Synchrotron Radiat., 22, 2015
4F8D	Crystal Structure of an R46A mutant of the Restriction-Modification Controller Protein C.Esp1396I (Monoclinic Form) 分子名称: Regulatory protein, SODIUM ION, SULFATE ION 著者 Martin, R.N.A, McGeehan, J.E, Kneale, G.G. 登録日 2012-05-17 公開日 2013-04-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. Plos One, 9, 2014
6RMQ	Crystal structure of a selenomethionine-substituted A70M I84M mutant of the essential repressor DdrO from radiation resistant-Deinococcus bacteria (Deinococcus deserti) 分子名称: HTH-type transcriptional regulator DdrOC 著者 Arnoux, P, Siponen, M.I, Pignol, D, De Groot, A, Blanchard, L. 登録日 2019-05-07 公開日 2019-10-09 最終更新日 2019-12-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus. Nucleic Acids Res., 47, 2019
4FBI	Crystal Structure of an R46A mutant of the Restriction-Modification Controller Protein C.Esp1396I (Trigonal Form) 分子名称: GLYCEROL, Regulatory protein 著者 Martin, R.N.A, McGeehan, J.E, Kneale, G.G. 登録日 2012-05-23 公開日 2013-04-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. Plos One, 9, 2014
4FN3	Crystal Structure of an S52A mutant of the Restriction-Modification Controller Protein C.Esp1396I 分子名称: Regulatory protein, SULFATE ION 著者 Martin, R.N.A, McGeehan, J.E, Kneale, G.G. 登録日 2012-06-19 公開日 2013-05-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. Plos One, 9, 2014
2XIU	High resolution structure of MTSL-tagged CylR2. 分子名称: CYLR2, GLYCEROL, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate 著者 Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S. 登録日 2010-07-01 公開日 2011-02-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy. J.Biomol.NMR, 49, 2011
2XJ3	High resolution structure of the T55C mutant of CylR2. 分子名称: CYLR2 SYNONYM CYTOLYSIN REPRESSOR 2, GLYCEROL 著者 Gruene, T, Cho, M.K, Karyagina, I, Kim, H.Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S. 登録日 2010-07-02 公開日 2011-02-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy. J.Biomol.NMR, 49, 2011
3JXC	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+ 分子名称: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2, THALLIUM (I) ION 著者 Watkins, D, Koudelka, G.B, Williams, L.D. 登録日 2009-09-18 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Sequence Recognition of DNA by Protein-Induced Conformational Transitions. J.Mol.Biol., 396, 2010
2XI8	High resolution structure of native CylR2 分子名称: GLYCEROL, PUTATIVE TRANSCRIPTION REGULATOR 著者 Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S. 登録日 2010-06-28 公開日 2011-02-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.21 Å) 主引用文献 Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy. J.Biomol.NMR, 49, 2011
3JXB	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C 分子名称: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*A)-3', 5'-D(*TP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2 著者 Watkins, D, Koudelka, G.B, Williams, L.D. 登録日 2009-09-18 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Sequence Recognition of DNA by Protein-Induced Conformational Transitions J.Mol.Biol., 396, 2010
4PU8	Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 2.35 分子名称: Toxin-antitoxin system antidote transcriptional repressor Xre family 著者 Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S. 登録日 2014-03-12 公開日 2014-08-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. Nucleic Acids Res., 42, 2014
4OB4	Structure of the S. venezulae BldD DNA-binding domain 分子名称: Putative DNA-binding protein 著者 schumacher, M.A, Tschowri, N, Buttner, M, Brennan, R. 登録日 2014-01-06 公開日 2014-11-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces development. Cell(Cambridge,Mass.), 158, 2014
3JXD	Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+ 分子名称: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', RUBIDIUM ION, Repressor protein C2 著者 Watkins, D, Koudelka, G.B, Williams, L.D. 登録日 2009-09-18 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Sequence Recognition of DNA by Protein-Induced Conformational Transitions. J.Mol.Biol., 396, 2010

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