8AO1
| solution structure of nanoFAST fluorogen-activating protein in the apo state | 分子名称: | nanoFAST | 著者 | Lushpa, V.A, Goncharuk, M.V, Goncharuk, S.A, Baranov, M.S, Mineev, K.S. | 登録日 | 2022-08-08 | 公開日 | 2022-11-23 | 実験手法 | SOLUTION NMR | 主引用文献 | Spatial Structure of NanoFAST in the Apo State and in Complex with its Fluorogen HBR-DOM2. Int J Mol Sci, 23, 2022
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4B9O
| The PR0 Photocycle Intermediate of Photoactive Yellow Protein | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A. | 登録日 | 2012-09-06 | 公開日 | 2012-11-14 | 最終更新日 | 2019-02-06 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography Proc.Natl.Acad.Sci.USA, 109, 2012
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2CMN
| A Proximal Arginine Residue in the Switching Mechanism of the FixL Oxygen Sensor | 分子名称: | PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL | 著者 | Gilles-Gonzalez, M.-A, Caceres, A.I, Silva Sousa, E.H, Tomchick, D.R, Brautigam, C.A, Gonzalez, C, Machius, M. | 登録日 | 2006-05-11 | 公開日 | 2007-05-15 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | A Proximal Arginine R206 Participates in Switching of the Bradyrhizobium Japonicum Fixl Oxygen Sensor J.Mol.Biol., 360, 2006
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2I9V
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1GSV
| Crystal structure of the P65 crystal form of photoactive yellow protein G47S mutant | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Van Aalten, D.M.F, Crielaard, W, Hellingwerf, K.J, Joshua-Tor, L. | 登録日 | 2002-01-08 | 公開日 | 2002-02-14 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Engineering Photocycle Dynamics: Crystal Structures and Kinetics of Three Photoactive Yellow Protein Hinge-Bending Mutants J.Biol.Chem., 227, 2002
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4BBU
| The PR2 Photocycle Intermediate of Photoactive Yellow Protein | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A. | 登録日 | 2012-09-27 | 公開日 | 2012-11-14 | 最終更新日 | 2019-05-08 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography. Proc.Natl.Acad.Sci.USA, 109, 2012
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4BBV
| The PB0 Photocycle Intermediate of Photoactive Yellow Protein | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A. | 登録日 | 2012-09-28 | 公開日 | 2012-11-14 | 最終更新日 | 2019-01-30 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography. Proc.Natl.Acad.Sci.USA, 109, 2012
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1GSX
| CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN G47S/G51S MUTANT | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Van Aalten, D.M.F, Crielaard, W, Hellingwerf, K.J, Joshua-Tor, L. | 登録日 | 2002-01-09 | 公開日 | 2002-02-14 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (1.79 Å) | 主引用文献 | Engineering Photocycle Dynamics: Crystal Structures and Kinetics of Three Photoactive Yellow Protein Hinge-Bending Mutants J.Biol.Chem., 227, 2002
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1GSW
| CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN G51S MUTANT | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Van Aalten, D.M.F, Crielaard, W, Hellingwerf, K.J, Joshua-Tor, L. | 登録日 | 2002-01-09 | 公開日 | 2002-02-14 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Engineering Photocycle Dynamics: Crystal Structures and Kinetics of Three Photoactive Yellow Protein Hinge-Bending Mutants J.Biol.Chem., 227, 2002
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3PYP
| PHOTOACTIVE YELLOW PROTEIN, CRYOTRAPPED EARLY LIGHT CYCLE INTERMEDIATE | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Genick, U.K, Soltis, S.M, Kuhn, P, Canestrelli, I.L, Getzoff, E.D. | 登録日 | 1998-07-28 | 公開日 | 1999-06-01 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (0.85 Å) | 主引用文献 | Structure at 0.85 A resolution of an early protein photocycle intermediate. Nature, 392, 1998
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2GJ3
| Crystal structure of the FAD-containing PAS domain of the protein NifL from Azotobacter vinelandii. | 分子名称: | ETHANOL, FLAVIN-ADENINE DINUCLEOTIDE, Nitrogen fixation regulatory protein, ... | 著者 | Key, J, Hefti, M, Purcell, E, Moffat, K. | 登録日 | 2006-03-30 | 公開日 | 2007-03-06 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (1.04 Å) | 主引用文献 | Structure of the redox sensor domain of Azotobacter vinelandii NifL at atomic resolution: signaling, dimerization, and mechanism. Biochemistry, 46, 2007
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2KX6
| Signaling state of Photoactive Yellow Protein | 分子名称: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | 著者 | Ramachandran, P.L, Lovett, J.E, Carl, P.J, Cammarata, M, Lee, J.H, Yang, J.O, Ihee, H, Timmel, C.R, van Thor, J. | 登録日 | 2010-04-27 | 公開日 | 2011-06-15 | 最終更新日 | 2012-07-18 | 実験手法 | SOLUTION NMR, SOLUTION SCATTERING | 主引用文献 | The short-lived signaling state of the photoactive yellow protein photoreceptor revealed by combined structural probes. J.Am.Chem.Soc., 133, 2011
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3UME
| Structure of pB intermediate of Photoactive yellow protein (PYP) at pH 7 | 分子名称: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | 著者 | Tripathi, S, Srajer, V, Purwar, N, Henning, R, Schmidt, M. | 登録日 | 2011-11-13 | 公開日 | 2012-04-11 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | pH Dependence of the Photoactive Yellow Protein Photocycle Investigated by Time-Resolved Crystallography. Biophys.J., 102, 2012
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3VE4
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6MHN
| Photoactive Yellow Protein with covalently bound 3-chloro-4-hydroxycinnamic acid chromophore | 分子名称: | (2E)-3-(3-chloro-4-hydroxyphenyl)prop-2-enoic acid, Photoactive yellow protein | 著者 | Thomson, B.D, Both, J, Wu, Y, Parrish, R.M, Martinez, T, Boxer, S.G. | 登録日 | 2018-09-18 | 公開日 | 2019-05-29 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.67 Å) | 主引用文献 | Perturbation of Short Hydrogen Bonds in Photoactive Yellow Protein via Noncanonical Amino Acid Incorporation. J.Phys.Chem.B, 123, 2019
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3VE3
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6MHI
| Photoactive Yellow Protein with covalently bound 3,5-dichloro-4-hydroxycinnamic acid chromophore | 分子名称: | (2E)-3-(3,5-dichloro-4-hydroxyphenyl)prop-2-enoic acid, Photoactive yellow protein | 著者 | Thomson, B.D, Both, J, Wu, Y, Parrish, R.M, Martinez, T, Boxer, S.G. | 登録日 | 2018-09-18 | 公開日 | 2019-05-29 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | Perturbation of Short Hydrogen Bonds in Photoactive Yellow Protein via Noncanonical Amino Acid Incorporation. J.Phys.Chem.B, 123, 2019
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6MKT
| Photoactive Yellow Protein with 3-chlorotyrosine substituted at position 42 | 分子名称: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | 著者 | Thomson, B.D, Both, J, Wu, Y, Parrish, R.M, Martinez, T, Boxer, S.G. | 登録日 | 2018-09-26 | 公開日 | 2019-05-29 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Perturbation of Short Hydrogen Bonds in Photoactive Yellow Protein via Noncanonical Amino Acid Incorporation. J.Phys.Chem.B, 123, 2019
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6MMD
| Photoactive Yellow Protein with 3,5-dichlorotyrosine substituted at position 42 | 分子名称: | 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein | 著者 | Thomson, B.D, Both, J, Wu, Y, Parrish, R.M, Martinez, T, Boxer, S.G. | 登録日 | 2018-09-30 | 公開日 | 2019-05-29 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.228 Å) | 主引用文献 | Perturbation of Short Hydrogen Bonds in Photoactive Yellow Protein via Noncanonical Amino Acid Incorporation. J.Phys.Chem.B, 123, 2019
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2W0N
| Plasticity of PAS domain and potential role for signal transduction in the histidine-kinase DcuS | 分子名称: | SENSOR PROTEIN DCUS | 著者 | Etzkorn, M, Kneuper, H, Duennwald, P, Vijayan, V, Kraemer, J, Griesinger, C, Becker, S, Unden, G, Baldus, M. | 登録日 | 2008-08-19 | 公開日 | 2008-09-30 | 最終更新日 | 2024-05-15 | 実験手法 | SOLID-STATE NMR | 主引用文献 | Plasticity of the Pas Domain and a Potential Role for Signal Transduction in the Histidine Kinase Dcus. Nat.Struct.Mol.Biol., 15, 2008
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2VV7
| BJFIXLH IN UNLIGANDED FERROUS FORM | 分子名称: | CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL, ... | 著者 | Ayers, R.A, Moffat, K. | 登録日 | 2008-06-04 | 公開日 | 2008-11-04 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (1.81 Å) | 主引用文献 | Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains. Biochemistry, 47, 2008
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2VV6
| BJFIXLH IN FERRIC FORM | 分子名称: | CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SENSOR PROTEIN FIXL, ... | 著者 | Ayers, R.A, Moffat, K. | 登録日 | 2008-06-04 | 公開日 | 2008-11-04 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains. Biochemistry, 47, 2008
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2VV8
| Co-bound structure of bjFixLH | 分子名称: | CARBON MONOXIDE, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ... | 著者 | Ayers, R.A, Moffat, K. | 登録日 | 2008-06-04 | 公開日 | 2008-11-04 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (1.61 Å) | 主引用文献 | Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains. Biochemistry, 47, 2008
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4M4X
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4BBT
| The PR1 Photocycle Intermediate of Photoactive Yellow Protein | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A. | 登録日 | 2012-09-27 | 公開日 | 2012-11-14 | 最終更新日 | 2019-01-30 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography. Proc.Natl.Acad.Sci.USA, 109, 2012
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