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1GEH
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CRYSTAL STRUCTURE OF ARCHAEAL RUBISCO (RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE)
分子名称: RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, SULFATE ION
著者Kitano, K, Maeda, N, Fukui, T, Atomi, H, Imanaka, T, Miki, K.
登録日2000-11-13
公開日2001-12-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of a Novel-Type Archaeal Rubisco with Pentagonal Symmetry
Structure, 9, 2001
6SMH
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Cryo-electron microscopy structure of a RbcL-Raf1 supercomplex from Synechococcus elongatus PCC 7942
分子名称: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1 (RAF1) peptide
著者Huang, F, Kong, W.-W, Sun, Y, Chen, T, Dykes, G.F, Jiang, Y.L, Liu, L.N.
登録日2019-08-21
公開日2020-07-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Rubisco accumulation factor 1 (Raf1) plays essential roles in mediating Rubisco assembly and carboxysome biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
1GK8
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Rubisco from Chlamydomonas reinhardtii
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Taylor, T.C.
登録日2001-08-09
公開日2001-10-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献First Crystal Structure of Rubisco from a Green Alga, Chlamydomonas Reinhardtii.
J.Biol.Chem., 276, 2001
3ZXW
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BU of 3zxw by Molmil
STRUCTURE OF ACTIVATED RUBISCO FROM THERMOSYNECHOCOCCUS ELONGATUS COMPLEXED WITH 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Terlecka, B, Wilhelmi, V, Bialek, W, Gubernator, B, Szczepaniak, A, Hofmann, E.
登録日2011-08-16
公開日2012-08-29
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase from Thermosynechococcus Elongatus
To be Published
6Z1G
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CryoEM structure of the interaction between Rubisco Activase small-subunit-like (SSUL) domain with Rubisco from Nostoc sp. (strain PCC7120)
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, Ribulose bisphosphate carboxylase/oxygenase activase
著者Wang, H, Bracher, A, Flecken, M, Popilka, L, Hartl, F.U, Hayer-Hartl, M.
登録日2020-05-13
公開日2020-09-23
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献Dual Functions of a Rubisco Activase in Metabolic Repair and Recruitment to Carboxysomes.
Cell, 183, 2020
3WQP
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BU of 3wqp by Molmil
Crystal structure of Rubisco T289D mutant from Thermococcus kodakarensis
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Fujihashi, M, Nishitani, Y, Kiriyama, T, Miki, K.
登録日2014-01-29
公開日2015-02-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mutation design of thermophilic Rubisco based on the three-dimensional structure enhances its activity at ambient temperature
to be published
6UEW
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Rubisco / CsoS2 N-peptide complex responsible for alpha-carboxysome cargo loading
分子名称: Ribulose bisphosphate carboxylase large chain, CsoS2 N-peptide fusion, Ribulose bisphosphate carboxylase small chain
著者Oltrogge, L.M, Savage, D.F.
登録日2019-09-23
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Multivalent interactions between CsoS2 and Rubisco mediate alpha-carboxysome formation.
Nat.Struct.Mol.Biol., 27, 2020
5C2C
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GWS1B RubisCO: Form II RubisCO derived from uncultivated Gallionellacea species (unliganded form)
分子名称: CHLORIDE ION, Form II RubisCO, MAGNESIUM ION
著者Arbing, M.A, Varaljay, V.A, Satagopan, S, Tabita, F.R.
登録日2015-06-15
公開日2015-12-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Functional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria.
Environ.Microbiol., 18, 2016
3KDO
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Crystal structure of Type III Rubisco SP6 mutant complexed with 2-CABP
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
登録日2009-10-23
公開日2010-10-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J.Biol.Chem., 285, 2010
3KDN
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Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
登録日2009-10-23
公開日2010-10-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J.Biol.Chem., 285, 2010
7ZBT
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BU of 7zbt by Molmil
Subtomogram averaging of Rubisco from native Halothiobacillus carboxysomes
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit
著者Ni, T, Zhu, Y, Yu, X, Sun, Y, Liu, L, Zhang, P.
登録日2022-03-24
公開日2022-07-20
最終更新日2023-01-18
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and assembly of cargo Rubisco in two native alpha-carboxysomes.
Nat Commun, 13, 2022
4F0H
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BU of 4f0h by Molmil
UNACTIVATED RUBISCO with OXYGEN BOUND
分子名称: OXYGEN MOLECULE, PHOSPHATE ION, Ribulose bisphosphate carboxylase large chain, ...
著者Stec, B.
登録日2012-05-04
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012
4F0M
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UNACTIVATED RUBISCO with MAGNESIUM AND A WATER MOLECULE BOUND
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Stec, B.
登録日2012-05-04
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012
2CWX
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BU of 2cwx by Molmil
Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
分子名称: Ribulose bisphosphate carboxylase
著者Mizohata, E, Mishima, C, Akasaka, R, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-27
公開日2005-12-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
To be Published
2D69
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BU of 2d69 by Molmil
Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)
分子名称: Ribulose bisphosphate carboxylase, SULFATE ION
著者Mizohata, E, Mishima, C, Akasaka, R, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-11-10
公開日2006-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)
To be Published
7VWX
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CryoEM structure of football-shaped GroEL:ES2 with RuBisCO
分子名称: Chaperonin GroEL, Co-chaperonin GroES, Ribulose bisphosphate carboxylase
著者Kim, H, Roh, S.H.
登録日2021-11-12
公開日2022-01-12
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Cryo-EM structures of GroEL:ES 2 with RuBisCO visualize molecular contacts of encapsulated substrates in a double-cage chaperonin.
Iscience, 25, 2022
7ZC1
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Subtomogram averaging of Rubisco from Cyanobium carboxysome
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase, small subunit
著者Ni, T, Zhu, Y, Seaton-Burn, W, Zhang, P.
登録日2022-03-25
公開日2022-07-06
最終更新日2023-01-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure and assembly of cargo Rubisco in two native alpha-carboxysomes.
Nat Commun, 13, 2022
6KYJ
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BU of 6kyj by Molmil
Hybrid-Rubisco (rice RbcL and sorghum RbcS) in complex with sulfate ions
分子名称: GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ...
著者Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H.
登録日2019-09-19
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity.
Mol Plant, 13, 2020
1IR2
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BU of 1ir2 by Molmil
Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, GLYCEROL, Large subunit of Rubisco, ...
著者Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
登録日2001-09-03
公開日2002-03-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
7T1C
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BU of 7t1c by Molmil
Crystal structure of RUBISCO from Sulfurivirga caldicuralii
分子名称: Ribulose-bisphosphate carboxylase
著者Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
登録日2021-12-01
公開日2022-09-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
7T1J
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Crystal structure of RUBISCO from Rhodospirillaceae bacterium BRH_c57
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
登録日2021-12-02
公開日2022-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
1IR1
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Crystal Structure of Spinach Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (Rubisco) Complexed with CO2, Mg2+ and 2-Carboxyarabinitol-1,5-Bisphosphate
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Large subunit of Rubisco, MAGNESIUM ION, ...
著者Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
登録日2001-08-31
公開日2002-03-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
4F0K
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UNACTIVATED RUBISCO with MAGNESIUM AND CARBON DIOXIDE BOUND
分子名称: CARBON DIOXIDE, CHLORIDE ION, GLYCEROL, ...
著者Stec, B.
登録日2012-05-04
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012
6KYI
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Rice Rubisco in complex with sulfate ions
分子名称: GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ...
著者Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H.
登録日2019-09-19
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity.
Mol Plant, 13, 2020
7YYO
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Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
著者Mann, D, Evans, S.L, Bergeron, J.R.C.
登録日2022-02-18
公開日2023-01-25
最終更新日2023-06-14
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Single-particle cryo-EM analysis of the shell architecture and internal organization of an intact alpha-carboxysome.
Structure, 31, 2023

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