PDB: 96 件ウェブページステータス検索Chemie searchBIRD

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6FBL	NMR Solution Structure of MINA-1(254-334) 分子名称: MINA-1 著者 Michel, E, Allain, F. 登録日 2017-12-19 公開日 2019-01-30 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 MINA-1 and WAGO-4 are part of regulatory network coordinating germ cell death and RNAi in C. elegans. Cell Death Differ., 26, 2019
6D6K	Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii 分子名称: Polyribonucleotide nucleotidyltransferase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-04-21 公開日 2018-05-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii to be published
5ZF6	Crystal structure of the dimeric human PNPase 分子名称: Polyribonucleotide nucleotidyltransferase 1, mitochondrial 著者 Yuan, H.S, Golzarroshan, B. 登録日 2018-03-02 公開日 2018-08-22 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.796 Å) 主引用文献 Crystal structure of dimeric human PNPase reveals why disease-linked mutants suffer from low RNA import and degradation activities. Nucleic Acids Res., 46, 2018
5YJJ	Crystal structure of PNPase from Staphylococcus epidermidis 分子名称: MAGNESIUM ION, PHOSPHATE ION, Polyribonucleotide nucleotidyltransferase 著者 Raj, R, Gopal, B. 登録日 2017-10-10 公開日 2018-01-31 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of Staphylococcus epidermidis Polynucleotide phosphorylase and its interactions with ribonucleases RNase J1 and RNase J2. Biochem. Biophys. Res. Commun., 495, 2018
5WWZ	Crystal structure of the KH2 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C 分子名称: RNA-binding E3 ubiquitin-protein ligase MEX3C, SULFATE ION 著者 Yang, L, Wang, C, Li, F, Gong, Q. 登録日 2017-01-05 公開日 2017-08-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity J. Biol. Chem., 292, 2017
5WWX	Crystal structure of the KH2 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C complex with RNA 分子名称: NICKEL (II) ION, RNA (5'-R(P*AP*GP*AP*GP*U)-3'), RNA-binding E3 ubiquitin-protein ligase MEX3C 著者 Yang, L, Wang, C, Li, F, Gong, Q. 登録日 2017-01-05 公開日 2017-08-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity J. Biol. Chem., 292, 2017
5WWW	Crystal structure of the KH1 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C complex with RNA 分子名称: RNA (5'-R(*GP*UP*UP*UP*AP*G)-3'), RNA-binding E3 ubiquitin-protein ligase MEX3C 著者 Yang, L, Wang, C, Li, F, Gong, Q. 登録日 2017-01-05 公開日 2017-08-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.798 Å) 主引用文献 The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity J. Biol. Chem., 292, 2017
4WAN	Crystal structure of Msl5 protein in complex with RNA at 1.8 A 分子名称: ACETATE ION, Branchpoint-bridging protein, GLYCEROL, ... 著者 Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S. 登録日 2014-08-29 公開日 2014-12-17 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs. Rna, 21, 2015
4WAL	Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A 分子名称: Branchpoint-bridging protein, CHLORIDE ION, GLYCEROL, ... 著者 Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S. 登録日 2014-08-29 公開日 2014-12-17 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs. Rna, 21, 2015
4NBQ	Structure of the polynucleotide phosphorylase (CBU_0852) from Coxiella burnetii 分子名称: Polyribonucleotide nucleotidyltransferase, SULFATE ION 著者 Rudolph, M.J, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J. 登録日 2013-10-23 公開日 2015-06-17 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.9138 Å) 主引用文献 Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015
4LIJ	Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution 分子名称: Far upstream element-binding protein 1, PHOSPHATE ION 著者 Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology, Partnership for T-Cell Biology (TCELL) 登録日 2013-07-02 公開日 2013-11-27 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution To be published
4JVY	Structure of the STAR (signal transduction and activation of RNA) domain of GLD-1 bound to RNA 分子名称: Female germline-specific tumor suppressor gld-1, RNA (5'-R(P*CP*UP*AP*AP*CP*AP*A)-3') 著者 Teplova, M, Hafner, M, Teplov, D, Essig, K, Tuschl, T, Patel, D.J. 登録日 2013-03-26 公開日 2013-05-08 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (2.853 Å) 主引用文献 Structure-function studies of STAR family Quaking proteins bound to their in vivo RNA target sites. Genes Dev., 27, 2013
4JVH	Structure of the star domain of quaking protein in complex with RNA 分子名称: Protein quaking, RNA (5'-R(*UP*UP*CP*AP*CP*UP*AP*AP*CP*AP*A)-3'), SULFATE ION 著者 Teplova, M, Hafner, M, Teplov, D, Essig, K, Tuschl, T, Patel, D.J. 登録日 2013-03-25 公開日 2013-05-08 実験手法 X-RAY DIFFRACTION (3.501 Å) 主引用文献 Structure-function studies of STAR family Quaking proteins bound to their in vivo RNA target sites. Genes Dev., 27, 2013
4B8T	RNA BINDING PROTEIN Solution structure of the third KH domain of KSRP in complex with the G-rich target sequence. 分子名称: 5'-R(*AP*GP*GP*GP*UP)-3', KH-TYPE SPLICING REGULATORY PROTEIN 著者 Nicastro, G, Garcia-Mayoral, M.F, Hollingworth, D, Kelly, G, Martin, S.R, Briata, P, Gherzi, R, Ramos, A. 登録日 2012-08-30 公開日 2012-11-07 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Noncanonical G Recognition Mediates Ksrp Regulation of Let-7 Biogenesis Nat.Struct.Mol.Biol., 19, 2012
4AM3	Crystal structure of C. crescentus PNPase bound to RNA 分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RNA, ... 著者 Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F. 登録日 2012-03-07 公開日 2012-04-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly. Open Biol., 2, 2012
4AIM	Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide 分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RIBONUCLEASE, ... 著者 Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F. 登録日 2012-02-10 公開日 2012-04-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly. Open Biol., 2, 2012
4AID	Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide 分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RIBONUCLEASE, ... 著者 Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F. 登録日 2012-02-09 公開日 2012-04-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly. Open Biol., 2, 2012
3VKE	Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides 分子名称: DNA (5'-D(P*AP*CP*CP*CP*CP*A)-3'), Poly(rC)-binding protein 1 著者 Traore, D.A.K, Wilce, M.C.J, Wilce, J.A. 登録日 2011-11-15 公開日 2012-02-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides Nucleic Acids Res., 40, 2012
3U1K	Crystal structure of human PNPase 分子名称: CITRIC ACID, Polyribonucleotide nucleotidyltransferase 1, mitochondrial 著者 Lin, C.L, Yuan, H.S. 登録日 2011-09-30 公開日 2012-02-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Crystal structure of human polynucleotide phosphorylase: insights into its domain function in RNA binding and degradation Nucleic Acids Res., 40, 2012
3KRM	Imp1 kh34 分子名称: GLYCEROL, Insulin-like growth factor 2 mRNA-binding protein 1 著者 Chao, J.A, Singer, R.H, Almo, S.C, Patskovsky, Y. 登録日 2009-11-18 公開日 2010-02-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 ZBP1 recognition of beta-actin zipcode induces RNA looping. Genes Dev., 24, 2010
3CDI	Crystal structure of E. coli PNPase 分子名称: Polynucleotide phosphorylase 著者 Shi, Z, Yang, W.Z, Lin-Chao, S, Chak, K.F, Yuan, H.S. 登録日 2008-02-27 公開日 2008-12-09 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of Escherichia coli PNPase: central channel residues are involved in processive RNA degradation. Rna, 14, 2008
3AEV	Crystal structure of a/eIF2alpha-aDim2p-rRNA complex from Pyrococcus horikoshii OT3 分子名称: Putative uncharacterized protein PH1566, RNA (5'-R(*GP*GP*AP*UP*CP*AP*CP*CP*UP*CP*C)-3'), Translation initiation factor 2 subunit alpha 著者 Tanokura, M, Jia, M.Z, Nagata, K. 登録日 2010-02-10 公開日 2010-04-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 An archaeal Dim2-like protein, aDim2p, forms a ternary complex with a/eIF2 alpha and the 3' end fragment of 16S rRNA J.Mol.Biol., 398, 2010
2Z0S	Crystal structure of putative exosome complex RNA-binding protein 分子名称: Probable exosome complex RNA-binding protein 1 著者 Murayama, K, Kato-Murayama, M, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-05-07 公開日 2007-11-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structure of putative exosome complex RNA-binding protein To be Published
2QND	Crystal Structure of the KH1-KH2 domains from human Fragile X Mental Retardation Protein 分子名称: FMR1 protein, MAGNESIUM ION 著者 Valverde, R, Regan, L. 登録日 2007-07-18 公開日 2007-11-06 最終更新日 2017-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Fragile X mental retardation syndrome: structure of the KH1-KH2 domains of fragile X mental retardation protein. Structure, 15, 2007
2PY9	Protein-RNA Interaction involving KH1 domain from Human Poly(C)-Binding Protein-2 分子名称: 12-mer C-rich strand of human telomeric RNA, Poly(rC)-binding protein 2 著者 James, T.L, Du, Z, Lee, J.K. 登録日 2007-05-15 公開日 2007-06-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 X-ray crystallographic and NMR studies of protein-protein and protein-nucleic acid interactions involving the KH domains from human poly(C)-binding protein-2. Rna, 13, 2007

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