PDB: 1901 件ウェブページステータス検索Chemie searchBIRD

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5VKO	SPT6 tSH2-RPB1 1468-1500 pT1471, pS1493 分子名称: DNA-directed RNA polymerase II subunit RPB1, ISOPROPYL ALCOHOL, Transcription elongation factor SPT6 著者 Sdano, M.A, Whitby, F.G, Hill, C.P. 登録日 2017-04-21 公開日 2017-09-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription. Elife, 6, 2017
5VKL	SPT6 tSH2-RPB1 1476-1500 pS1493 分子名称: DNA-directed RNA polymerase II subunit RPB1, Transcription elongation factor SPT6 著者 Sdano, M.A, Whitby, F.G, Hill, C.P. 登録日 2017-04-21 公開日 2017-10-25 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.198 Å) 主引用文献 A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription. Elife, 6, 2017
2LT3	Solution NMR structure of the C-terminal domain of CdnL from Myxococcus xanthus 分子名称: Transcriptional regulator, CarD family 著者 Mirassou, Y, Garcia-Moreno, D, Padmanabhan, S, Jimenez, M.A. 登録日 2012-05-14 公開日 2013-11-13 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL. Plos One, 9, 2014
2LT4	CdnLNt from Myxoccoccus xanthus 分子名称: Transcriptional regulator, CarD family 著者 Jimenez, M.A, Padmanabhan, S, Mirassou, Y. 登録日 2012-05-14 公開日 2013-11-13 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL. Plos One, 9, 2014
2LWJ	NMR solution structure Myxoccoccus xanthus CdnL 分子名称: Transcriptional regulator, CarD family 著者 Jimenez, M, Padmanabhan, S, Mirassou, Y. 登録日 2012-08-01 公開日 2014-02-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL. Plos One, 9, 2014
5M1S	Cryo-EM structure of the E. coli replicative DNA polymerase-clamp-exonuclase-theta complex bound to DNA in the editing mode 分子名称: DNA Primer Strand, DNA Template Strand, DNA polymerase III subunit alpha, ... 著者 Fernandez-Leiro, R, Conrad, J, Scheres, S.H.W, Lamers, M.H. 登録日 2016-10-10 公開日 2017-01-18 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Self-correcting mismatches during high-fidelity DNA replication. Nat. Struct. Mol. Biol., 24, 2017
7NKY	RNA Polymerase II-Spt4/5-nucleosome-FACT structure 分子名称: Chromatin elongation factor SPT4, DNA (138-MER), DNA (148-MER), ... 著者 Farnung, L, Ochmann, M, Engeholm, M, Cramer, P. 登録日 2021-02-19 公開日 2021-07-07 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of nucleosome transcription mediated by Chd1 and FACT. Nat.Struct.Mol.Biol., 28, 2021
2E9T	Foot-and-mouth disease virus RNA-polymerase RNA dependent in complex with a template-primer RNA and 5F-UTP 分子名称: 5'-R(*GP*GP*GP*CP*CP*CP*(5FU))-3', 5'-R(P*UP*AP*GP*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ... 著者 Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N. 登録日 2007-01-26 公開日 2007-06-26 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Sequential structures provide insights into the fidelity of RNA replication Proc.Natl.Acad.Sci.Usa, 104, 2007
5MWW	Sigma1.1 domain of sigmaA from Bacillus subtilis 分子名称: RNA polymerase sigma factor SigA 著者 Zachrdla, M, Padrta, P, Rabatinova, A, Sanderova, H, Barvik, I, Krasny, L, Zidek, L. 登録日 2017-01-20 公開日 2017-06-14 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Solution structure of domain 1.1 of the sigma (A) factor from Bacillus subtilis is preformed for binding to the RNA polymerase core. J. Biol. Chem., 292, 2017
1F6X	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE 分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN 著者 Schmitz, M, Tinoco Jr, I. 登録日 2000-06-23 公開日 2000-10-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
2M4V	Mycobacterium tuberculosis RNA polymerase binding protein A (RbpA) and its interactions with sigma factors 分子名称: Putative uncharacterized protein 著者 Bortoluzzi, A, Muskett, F.W, Waters, L.C, Addis, P.W, Rieck, B, Munder, T, Schleier, S, Forti, F, Ghisotti, D, Carr, M.D, O'Hare, H.M. 登録日 2013-02-11 公開日 2013-04-17 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Mycobacterium tuberculosis RNA polymerase-binding protein A (RbpA) and its interactions with sigma factors. J.Biol.Chem., 288, 2013
7UME	DENV1 SLA top stemloop RNA (DenvTSL) 分子名称: RNA (28-MER) 著者 Sun, Y.T, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-04-06 公開日 2022-07-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure of the dengue virus RNA promoter. Rna, 28, 2022
7UMD	DENV1 SLA three-way junction RNA (DenvSLAsh) 分子名称: RNA (40-MER) 著者 Sun, Y.T, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-04-06 公開日 2022-07-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure of the dengue virus RNA promoter. Rna, 28, 2022
7UMC	DENV1 SLA RNA (DenvSLATL) 分子名称: RNA (70-MER) 著者 Sun, Y.T, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-04-06 公開日 2022-07-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure of the dengue virus RNA promoter. Rna, 28, 2022
1F6Z	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE 分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN MUTANT 著者 Schmitz, M, Tinoco Jr, I. 登録日 2000-06-24 公開日 2000-10-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7F	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE, NMR, ENSEMBLE OF 9 STRUCTURES 分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN 著者 Schmitz, M, Tinoco Jr, I. 登録日 2000-06-27 公開日 2000-10-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7G	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE, ENSEMBLE OF 17 STRUCTURES 分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN 著者 Schmitz, M, Tinoco Jr, I. 登録日 2000-06-27 公開日 2000-10-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
6Z11	Structure of Mycobacterium smegmatis HelD protein in complex with RNA polymerase core - State III, primary channel dis-engaged and active site interfering 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Kouba, T, Koval, T, Krasny, L, Dohnalek, J. 登録日 2020-05-11 公開日 2020-11-04 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.36 Å) 主引用文献 HelD, a helicase-like protein from gram-positive bacteria in complex with RNA polymerase To Be Published
8W8E	human co-transcriptional RNA capping enzyme RNGTT 分子名称: DNA (36-MER), DNA (45-MER), DNA-directed RNA polymerase II subunit E, ... 著者 Li, Y, Wang, Q, Xu, Y, Li, Z. 登録日 2023-09-02 公開日 2024-04-10 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures of co-transcriptional RNA capping enzymes on paused transcription complex. Nat Commun, 15, 2024
8W8F	human co-transcriptional RNA capping enzyme RNGTT-CMTR1 分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, DNA (36-MER), DNA (45-MER), ... 著者 Li, Y, Wang, Q, Xu, Y, Li, Z. 登録日 2023-09-02 公開日 2024-04-10 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structures of co-transcriptional RNA capping enzymes on paused transcription complex. Nat Commun, 15, 2024
4WTM	CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-UAGG, RNA PRIMER 5'-PCC, MN2+, AND UDP 分子名称: CHLORIDE ION, MANGANESE (II) ION, RNA PRIMER CC, ... 著者 Edwards, T.E, Appleby, T.C, Fox III, D. 登録日 2014-10-30 公開日 2015-02-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural basis for RNA replication by the hepatitis C virus polymerase. Science, 347, 2015
8P0J	Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex 分子名称: DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ... 著者 Grimm, C, Jungwirth, S, Fischer, U. 登録日 2023-05-10 公開日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.39 Å) 主引用文献 Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target) To Be Published
6PMJ	Sigm28-transcription initiation complex with specific promoter at the state 2 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Liu, B, Shi, W. 登録日 2019-07-02 公開日 2020-05-13 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.91 Å) 主引用文献 Structural basis of bacterial sigma28-mediated transcription reveals roles of the RNA polymerase zinc-binding domain. Embo J., 39, 2020
6PMI	Sigm28-transcription initiation complex with specific promoter at the state 1 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Liu, B, Shi, W. 登録日 2019-07-02 公開日 2020-05-13 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.86 Å) 主引用文献 Structural basis of bacterial sigma28-mediated transcription reveals roles of the RNA polymerase zinc-binding domain. Embo J., 39, 2020
8P0N	Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex shallow conformation 分子名称: DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ... 著者 Grimm, C, Jungwirth, S, Fischer, U. 登録日 2023-05-10 公開日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target) To Be Published

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