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1JBY
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CRYSTAL STRUCTURE ANALYSIS OF A DUAL-WAVELENGTH EMISSION GREEN FLUORESCENT PROTEIN VARIANT AT LOW PH
分子名称: GREEN FLUORESCENT PROTEIN
著者Hanson, G.T, McAnaney, T.B, Park, E.S, Rendell, M.E.P, Yarbrough, D.K, Chu, S, Xi, L, Boxer, S.G, Montrose, M.H, Remington, S.J.
登録日2001-06-07
公開日2003-01-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Green Fluorescent Protein Variants as Ratiometric Dual Emission pH Sensors. 1. Structural Characterization and Preliminary Application.
Biochemistry, 41, 2002
4IK9
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High resolution structure of GCaMP3 dimer form 2 at pH 7.5
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, RCaMP, ...
著者Chen, Y, Song, X, Miao, L, Zhu, Y, Ji, G.
登録日2012-12-25
公開日2014-01-29
最終更新日2017-06-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insight into enhanced calcium indicator GCaMP3 and GCaMPJ to promote further improvement.
Protein Cell, 4, 2013
2PSJ
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BU of 2psj by Molmil
Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla Reniformis
分子名称: N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, Renilla-luciferin 2-monooxygenase
著者Loening, A.M, Fenn, T.D, Gambhir, S.S.
登録日2007-05-06
公開日2007-06-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis.
J.Mol.Biol., 374, 2007
3FZA
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BU of 3fza by Molmil
Crystal structure of poplar glutaredoxin S12 in complex with glutathione and beta-mercaptoethanol
分子名称: BETA-MERCAPTOETHANOL, GLUTATHIONE, Glutaredoxin
著者Didierjean, C, Corbier, C, Koh, C.S, Rouhier, N, Jacquot, J.P.
登録日2009-01-24
公開日2009-02-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site.
J.Biol.Chem., 284, 2009
3GJ1
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BU of 3gj1 by Molmil
Non photoactivated state of PA-GFP
分子名称: CHLORIDE ION, Green fluorescent protein, SULFATE ION
著者Henderson, J.N, Gepshtein, R, Heenan, J.R, Kallio, K, Huppert, D, Remington, S.J.
登録日2009-03-07
公開日2009-03-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and mechanism of the photoactivatable green fluorescent protein.
J.Am.Chem.Soc., 131, 2009
1QYQ
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BU of 1qyq by Molmil
Crystal Structure of the cyclized S65G Y66G GFP variant
分子名称: green-fluorescent protein
著者Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2003-09-11
公開日2003-09-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
2OGR
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BU of 2ogr by Molmil
Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution
分子名称: FLUORESCENT PROTEIN FP538
著者Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
登録日2007-01-08
公開日2007-09-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom
Bioorg.Khim., 33
2GX2
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Crystal structural and functional analysis of GFP-like fluorescent protein Dronpa
分子名称: MAGNESIUM ION, fluorescent protein Dronpa
著者Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K.
登録日2006-05-08
公開日2007-05-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S
Biochem.Biophys.Res.Commun., 354, 2007
4IR6
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Crystal Structure of the bromodomain of human BAZ2B in complex with 1-{1-[2-(METHYLSULFONYL)PHENYL]-7-PHENOXYINDOLIZIN-3-YL}ETHANONE (GSK2838097A)
分子名称: 1,2-ETHANEDIOL, 1-{1-[2-(methylsulfonyl)phenyl]-7-phenoxyindolizin-3-yl}ethanone, Bromodomain adjacent to zinc finger domain protein 2B
著者Chaikuad, A, Felletar, I, Chung, C.W, Drewry, D, Chen, P, Filippakopoulos, P, Fedorov, O, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2013-01-14
公開日2013-01-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery and Characterization of GSK2801, a Selective Chemical Probe for the Bromodomains BAZ2A and BAZ2B.
J.Med.Chem., 59, 2016
3P28
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Structure of a Circular Permutant of Green Fluorescent Protein
分子名称: Green fluorescent protein
著者Melief, E.H, Kim, H, Kim, T.S, Wachter, R.M, Tonge, P.J.
登録日2010-10-01
公開日2011-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Construction and Characterization of a Stable Circular Permutant of Green Fluorescent Protein
To be Published
4EES
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BU of 4ees by Molmil
Crystal structure of iLOV
分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2
著者Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D.
登録日2012-03-28
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability.
J.Biol.Chem., 287, 2012
6M9X
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X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A
分子名称: Fluorescent protein lanFP10A
著者Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
登録日2018-08-24
公開日2019-03-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue.
J. Mol. Biol., 431, 2019
8A83
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rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination
分子名称: Green fluorescent protein, SULFATE ION
著者Fadini, A, van Thor, J, Chang, J.
登録日2022-06-21
公開日2023-07-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8DTA
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BU of 8dta by Molmil
Metal sensitive GFP (mseGFP) complexed with phenylarsine oxide.
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ...
著者Rosenbaum, J.C, Carlson, A.E.
登録日2022-07-25
公開日2023-07-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Glutathione modulates metal binding to proteins.
TBD
7LG4
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BU of 7lg4 by Molmil
Green fluorescent protein from Aequorea macrodactyla - amacGFP
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Bozhanova, N.G, Meiler, J.
登録日2021-01-19
公開日2021-01-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Heterogeneity of the GFP fitness landscape and data-driven protein design.
Elife, 11, 2022
7Z01
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Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex
分子名称: 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol, CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
著者Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M.
登録日2022-02-21
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M.
J.Am.Chem.Soc., 144, 2022
2H9W
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Green fluorescent protein ground states: the influence of a second protonation site near the chromophore
分子名称: Green fluorescent protein, SULFATE ION
著者Garau, G.
登録日2006-06-12
公開日2007-04-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Green Fluorescent Protein Ground States: The Influence of a Second Protonation Site near the Chromophore.
Biochemistry, 46, 2007
6QQ9
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Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 5.8 MGy
分子名称: CARBON DIOXIDE, Green fluorescent protein
著者Gotthard, G, Aumonier, S, Royant, A.
登録日2019-02-18
公開日2019-06-19
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
2C9I
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Structure of the fluorescent protein asFP499 from Anemonia sulcata
分子名称: GREEN FLUORESCENT PROTEIN ASFP499
著者Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U.
登録日2005-12-12
公開日2007-01-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Chromophore-Protein Interactions in the Anthozoan Green Fluorescent Protein Asfp499
Biophys.J., 91, 2006
4ZF4
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Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(Cl1Y), H148D; circular permutant (50-51)
分子名称: Green fluorescent protein
著者Oltrogge, L.M, Boxer, S.G.
登録日2015-04-21
公開日2015-06-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.823 Å)
主引用文献Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP).
Acs Cent.Sci., 1, 2015
8SFV
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High affinity nanobodies to GFP
分子名称: GLYCEROL, Green fluorescent protein, LaG19, ...
著者Ketaren, N.E, Rout, M.P, Bonanno, J.B, Almo, S.C.
登録日2023-04-11
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献High affinity nanobodies to GFP
To Be Published
8I4K
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Structure of Azami Red1.0, a red fluorescent protein engineered from Azami Green
分子名称: Azami Red1.0, CALCIUM ION
著者Otsubo, S, Takekawa, N, Imamura, H, Imada, K.
登録日2023-01-19
公開日2023-11-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Red fluorescent proteins engineered from green fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
2AG5
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Crystal Structure of Human DHRS6
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, dehydrogenase/reductase (SDR family) member 6
著者Kunde, G, Lukacik, P, Papagrigoriou, E, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Von Delft, F, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2005-07-26
公開日2005-08-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Characterization of human DHRS6, an orphan short chain dehydrogenase/reductase enzyme: a novel, cytosolic type 2 R-beta-hydroxybutyrate dehydrogenase
J.Biol.Chem., 281, 2006
3EK7
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Calcium-saturated GCaMP2 dimer
分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
著者Akerboom, J, Velez Rivera, J.D, Looger, L.L, Schreiter, E.R.
登録日2008-09-18
公開日2008-12-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design
J.Biol.Chem., 284, 2009
7A7X
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rsGreen0.7-F145M in the green-off state
分子名称: Green fluorescent protein
著者De Zitter, E, Dedecker, P, Van Meervelt, L.
登録日2020-08-30
公開日2021-02-17
最終更新日2021-05-05
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021

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