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3AXS
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Complex structure of tRNA methyltransferase Trm1 from Aquifex aeolicus with sinefungin
分子名称: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1, SINEFUNGIN, SULFATE ION, ...
著者Ihsanawati, Sengoku, T, Yokoyama, S, Bessho, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-04-13
公開日2011-08-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.162 Å)
主引用文献Substrate tRNA recognition mechanism of a multisite-specific tRNA methyltransferase, Aquifex aeolicus Trm1, based on the X-ray crystal structure
J.Biol.Chem., 286, 2011
3AXT
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Complex structure of tRNA methyltransferase Trm1 from Aquifex aeolicus with S-adenosyl-L-Methionine
分子名称: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1, S-ADENOSYLMETHIONINE, SULFATE ION, ...
著者Ihsanawati, Sengoku, T, Yokoyama, S, Bessho, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-04-14
公開日2011-08-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.491 Å)
主引用文献Substrate tRNA recognition mechanism of a multisite-specific tRNA methyltransferase, Aquifex aeolicus Trm1, based on the X-ray crystal structure
J.Biol.Chem., 286, 2011
3AY9
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Crystal structure of human Hsp70 NBD in the ADP-, Mg ion-, and K ion-bound state
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Arakawa, A, Handa, N, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-05-03
公開日2011-12-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Biochemical and structural studies on the high affinity of Hsp70 for ADP.
Protein Sci., 20, 2011
3AZC
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BU of 3azc by Molmil
Crystal structure of the soluble part of cytochrome b6f complex iron-sulfur subunit from Thermosynechococcus elongatus BP-1
分子名称: Cytochrome b6-f complex iron-sulfur subunit, FE2/S2 (INORGANIC) CLUSTER
著者Veit, S, Takeda, K, Tsunoyama, Y, Roegner, M, Miki, K.
登録日2011-05-23
公開日2012-05-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a thermophilic cyanobacterial b(6)f-type Rieske protein
Acta Crystallogr.,Sect.D, 68, 2012
3B09
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Crystal structure of the N-domain of FKBP22 from Shewanella sp. SIB1
分子名称: Peptidyl-prolyl cis-trans isomerase
著者Budiman, C, Angkawidjaja, C, Motoike, H, Koga, Y, Takano, K, Kanaya, S.
登録日2011-06-07
公開日2012-04-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of N-domain of FKBP22 from Shewanella sp. SIB1: dimer dissociation by disruption of Val-Leu knot
Protein Sci., 20, 2011
3B0K
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Crystal structure of alpha-lactalbumin
分子名称: Alpha-lactalbumin, CALCIUM ION
著者Makabe, K.
登録日2011-06-10
公開日2012-06-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
3B5T
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Crystal Structure of Novel Immune-Type Receptor 10 Se-Met Extracellular Fragment Mutant N30D
分子名称: Novel immune-type receptor 10
著者Ostrov, D.A, Hernandez Prada, J.A, Haire, R.N, Cannon, J.P, Magis, A.T, Bailey, K.M, Litman, G.W.
登録日2007-10-26
公開日2008-06-24
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A bony fish immunological receptor of the NITR multigene family mediates allogeneic recognition.
Immunity, 29, 2008
3B7H
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Crystal structure of the prophage Lp1 protein 11
分子名称: Prophage Lp1 protein 11
著者Zhang, R, Zhou, M, Keigher, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-10-30
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the prophage Lp1 protein 11.
To be Published
3B7O
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Crystal structure of the human tyrosine phosphatase SHP2 (PTPN11) with an accessible active site
分子名称: D-MALATE, Tyrosine-protein phosphatase non-receptor type 11
著者Ugochukwu, E, Barr, A, Patel, A, King, O, Niesen, F, Salah, E, Savitsky, P, Pilka, E.S, Elkins, J, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, von Delft, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2007-10-31
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Large-scale structural analysis of the classical human protein tyrosine phosphatome.
Cell(Cambridge,Mass.), 136, 2009
3C8R
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Contributions of all 20 amino acids at site 96 to stability and structure of T4 lysozyme
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme
著者Mooers, B.H.M.
登録日2008-02-13
公開日2009-02-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme.
Protein Sci., 18, 2009
3BK1
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Crystal Structure Analysis of RNase J
分子名称: GLYCEROL, Metal dependent hydrolase, SULFATE ION, ...
著者de la Sierra-Gallay, I.L, Zig, L, Putzer, H.
登録日2007-12-05
公開日2008-01-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structural insights into the dual activity of RNase J
Nat.Struct.Mol.Biol., 15, 2008
3BKT
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Copper-bound C-terminal Domain of NikR
分子名称: COPPER (II) ION, Nickel-responsive regulator
著者Phillips, C.M, Schreiter, E.R, Drennan, C.L.
登録日2007-12-07
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Basis of the Metal Specificity for Nickel Regulatory Protein NikR.
Biochemistry, 47, 2008
3BQH
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Structure of the central domain (MsrA) of Neisseria meningitidis PilB (oxidized form)
分子名称: ACETATE ION, Peptide methionine sulfoxide reductase msrA/msrB
著者Ranaivoson, F.M, Kauffmann, B, Favier, F.
登録日2007-12-20
公開日2008-02-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis
J.Mol.Biol., 377, 2008
3BUK
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Crystal Structure of the Neurotrophin-3 and p75NTR Symmetrical Complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neurotrophin-3, Tumor necrosis factor receptor superfamily member 16
著者Jiang, T, Gong, Y, Cao, P, Yu, H.J.
登録日2008-01-02
公開日2008-07-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the neurotrophin-3 and p75NTR symmetrical complex.
Nature, 454, 2008
3C7W
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Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme
著者Mooers, B.H.M.
登録日2008-02-08
公開日2009-02-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme.
Protein Sci., 18, 2009
3C2H
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Crystal Structure of SYS-1 at 2.6A resolution
分子名称: CITRATE ANION, GLYCEROL, Sys-1 protein
著者Liu, J, Phillips, B.T, Amaya, M.F, Kimble, J, Xu, W.
登録日2008-01-25
公開日2008-05-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The C. elegans SYS-1 protein is a bona fide beta-catenin.
Dev.Cell, 14, 2008
2Z6H
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Crystal Structure of Beta-Catenin Armadillo Repeat Region and Its C-Terminal domain
分子名称: Catenin beta-1
著者Xing, Y, Takemaru, K, Liu, J, Zheng, J, Moon, R, Xu, W.
登録日2007-08-01
公開日2008-02-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of a Full-Length beta-Catenin
Structure, 16, 2008
2Z3N
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BU of 2z3n by Molmil
complex structure of LF-transferase and peptide B
分子名称: D(-)-TARTARIC ACID, Leucyl/phenylalanyl-tRNA-protein transferase, peptide (PHE)(ARG)(TYR)(LEU)(GLY)
著者Watanabe, K, Toh, Y, Tomita, K.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein-based peptide-bond formation by aminoacyl-tRNA protein transferase
Nature, 449, 2007
2Z4R
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Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION
著者Fujikawa, N, Ozaki, S, Kagawa, W, Park, S.-Y, Katayama, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-06-25
公開日2008-02-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin
J.Biol.Chem., 283, 2008
2ZHY
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Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis
分子名称: ATP:cob(I)alamin adenosyltransferase, putative
著者Moon, J.H, Park, A.K, Jang, E.H, Kim, H.S, Chi, Y.M.
登録日2008-02-11
公開日2008-07-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a PduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis.
Proteins, 72, 2008
2ZIS
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Crystal Structure of rat protein farnesyltransferase complexed with a bezoruran inhibitor and FPP
分子名称: 3-{2-[(S)-(4-cyanophenyl)(hydroxy)(1-methyl-1H-imidazol-5-yl)methyl]-5-nitro-1-benzofuran-7-yl}benzonitrile, ACETIC ACID, FARNESYL DIPHOSPHATE, ...
著者Fukami, T.A, Sogabe, S, Nagata, Y, Kondoh, O, Ishii, N.
登録日2008-02-22
公開日2009-02-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Synthesis and structure-activity relationships of novel benzofuran farnesyltransferase inhibitors
Bioorg.Med.Chem.Lett., 19, 2009
2ZK7
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Structure of a C-terminal deletion mutant of Thermoplasma acidophilum aldohexose dehydrogenase (AldT)
分子名称: Glucose 1-dehydrogenase related protein
著者Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, N, Tamura, T.
登録日2008-03-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献C-terminal tail derived from the neighboring subunit is critical for the activity of Thermoplasma acidophilum D-aldohexose dehydrogenase
Proteins, 74, 2009
2ZUS
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Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase
分子名称: Lacto-N-biose phosphorylase, MAGNESIUM ION
著者Hidaka, M, Nishimoto, M, Kitaoka, M, Wakagi, T, Shoun, H, Fushinobu, S.
登録日2008-10-28
公開日2008-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献The crystal structure of galacto-N-biose/lacto-N-biose I phosphorylase: A large deformation of a tim barrel scaffold
J.Biol.Chem., 284, 2009
2ZTV
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The binary complex of D-3-hydroxybutyrate dehydrogenase with NAD+
分子名称: D(-)-3-hydroxybutyrate dehydrogenase, GLYCEROL, MAGNESIUM ION, ...
著者Nakashima, K, Nakajima, Y, Ito, K, Yoshimoto, T.
登録日2008-10-09
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Closed complex of the D-3-hydroxybutyrate dehydrogenase induced by an enantiomeric competitive inhibitor.
J.Biochem., 145, 2009
2ZUV
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Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc, Ethylene glycol, and nitrate
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, Lacto-N-biose phosphorylase, ...
著者Hidaka, M, Nishimoto, M, Kitaoka, M, Wakagi, T, Shoun, H, Fushinobu, S.
登録日2008-10-28
公開日2008-12-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The crystal structure of galacto-N-biose/lacto-N-biose I phosphorylase: A large deformation of a tim barrel scaffold
J.Biol.Chem., 284, 2009

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