PDB: 45853 件ウェブページステータス検索Chemie searchBIRD

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3DM5	Structures of SRP54 and SRP19, the two proteins assembling the ribonucleic core of the Signal Recognition Particle from the archaeon Pyrococcus furiosus. 分子名称: ACETATE ION, GUANOSINE-5'-DIPHOSPHATE, SULFATE ION, ... 著者 Egea, P.F, Napetschnig, J, Walter, P, Stroud, R.M. 登録日 2008-06-30 公開日 2008-11-04 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structures of SRP54 and SRP19, the two proteins that organize the ribonucleic core of the signal recognition particle from Pyrococcus furiosus. Plos One, 3, 2008
3DN4	Iodobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant 分子名称: 2-HYDROXYETHYL DISULFIDE, Lysozyme, PHOSPHATE ION, ... 著者 Liu, L, Matthews, B.W. 登録日 2008-07-01 公開日 2008-11-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding. J.Mol.Biol., 385, 2009
3DQ9	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 1: Structure 15 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3IFF	2'-SeMe-A modified DNA decamer 分子名称: DNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*(XUA)P*C)-3'), MAGNESIUM ION 著者 Sheng, J, Gan, J, Salon, J, Huang, Z. 登録日 2009-07-24 公開日 2009-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Selenium modification at 2'-position of adenosine for nucleic acid structure studies To be Published
3DQM	Structure of the Yellow Fluorescent Protein Citrine Frozen at 750 Atmospheres: Structure 4 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
2V3Y	His361Ala Escherichia coli aminopeptidase P in complex with product 分子名称: CHLORIDE ION, MANGANESE (II) ION, TRIPEPTIDE (VALINE-PROLINE-LEUCINE), ... 著者 Graham, S.C, Guss, J.M. 登録日 2007-06-25 公開日 2007-11-20 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Complexes of Mutants of Escherichia Coli Aminopeptidase P and the Tripeptide Substrate Valproleu. Arch.Biochem.Biophys., 469, 2008
3DRH	Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation 分子名称: Oligopeptide-binding protein oppA, peptide AAAAAA 著者 Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. 登録日 2008-07-11 公開日 2009-03-31 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
2VGL	AP2 CLATHRIN ADAPTOR CORE 分子名称: ADAPTOR PROTEIN COMPLEX AP-2, ALPHA 2 SUBUNIT, AP-2 COMPLEX SUBUNIT BETA-1, ... 著者 Owen, D.J, Collins, B.M, McCoy, A.J, Evans, P.R. 登録日 2007-11-14 公開日 2007-12-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Molecular Architecture and Functional Model of the Endocytic Ap2 Complex Cell(Cambridge,Mass.), 109, 2002
3IHC	Crystal structure of mouse Bcl-xl (wt) at pH 5.0 分子名称: Bcl-2-like protein 1 著者 Priyadarshi, A, Hwang, K.Y. 登録日 2009-07-30 公開日 2010-04-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol. Biochem.Biophys.Res.Commun., 394, 2010
3DMO	1.6 A crystal structure of cytidine deaminase from Burkholderia pseudomallei 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Cytidine deaminase, PHOSPHATE ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2008-07-01 公開日 2008-07-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 1.6 A crystal structure of cytidine deaminase from Burkholderia pseudomallei To be Published
2VJE	Crystal Structure of the MDM2-MDMX RING Domain Heterodimer 分子名称: CITRATE ANION, E3 UBIQUITIN-PROTEIN LIGASE MDM2, MDM4 PROTEIN, ... 著者 Mace, P.D, Linke, K, Smith, C.A, Day, C.L. 登録日 2007-12-10 公開日 2008-05-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of the MDM2/MDMX RING domain heterodimer reveals dimerization is required for their ubiquitylation in trans. Cell Death Differ., 15, 2008
2VH7	Crystal structure of human common-type acylphosphatase 分子名称: ACYLPHOSPHATASE-1 著者 Yeung, R.C.Y, Lam, Y, Wong, K.B. 登録日 2007-11-19 公開日 2009-03-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 A Rigidifying Salt-Bridge Favors the Activity of Thermophilic Enzyme at High Temperatures at the Expense of Low-Temperature Activity. Plos Biol., 9, 2011
3DQ2	Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 1: Structure 23 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
2VIO	Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator 分子名称: 4-(2-aminoethoxy)-3,5-dichlorobenzoic acid, ACETATE ION, UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B 著者 Frederickson, M, Callaghan, O, Chessari, G, Congreve, M, Cowan, S.R, Matthews, J.E, McMenamin, R, Smith, D, Vinkovic, M, Wallis, N.G. 登録日 2007-12-05 公開日 2008-01-22 最終更新日 2017-07-05 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator J.Med.Chem., 51, 2008
3DQC	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 3: Structure 13 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DRF	Lactococcal OppA complexed with an endogenous peptide in the closed conformation 分子名称: Oligopeptide-binding protein oppA, endogenous peptide 著者 Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. 登録日 2008-07-11 公開日 2009-03-31 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
3DVN	Crystal structure of K63-specific fab Apu2.16 bound to K63-linked di-ubiquitin 分子名称: Human IgG1 fab fragment heavy chain, Human IgG1 fab fragment light chain, Ubiquitin, ... 著者 Hymowitz, S.G. 登録日 2008-07-18 公開日 2008-09-30 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies. Cell(Cambridge,Mass.), 134, 2008
3DUF	Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex 分子名称: 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-[(1R)-1-HYDROXYETHYL]-3-METHYL-2-THIENYL}ETHYL TRIHYDROGEN DIPHOSPHATE, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, MAGNESIUM ION, ... 著者 Pei, X.Y, Titman, C.M, Frank, R.A.W, Leeper, F.J, Luisi, B.F. 登録日 2008-07-17 公開日 2009-01-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multienzyme complex Structure, 16, 2008
3DZN	Thaumatin by LB nanotemplate method before high X-Ray dose on ESRF ID29 beamline 分子名称: L(+)-TARTARIC ACID, Thaumatin-1 著者 Tripathi, S, Pechkova, E, Nicolini, C. 登録日 2008-07-30 公開日 2009-07-07 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3DKR	Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism 分子名称: ACETATE ION, Esterase D 著者 Bennett, M.D, Delabre, M.-L, Holland, R, Norris, G.E. 登録日 2008-06-25 公開日 2009-06-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of esterase D from lactobacillus rhamnosus To be Published
3I8Z	Crystal structure of human chromobox homolog 4 (CBX4) 分子名称: E3 SUMO-protein ligase CBX4 著者 Amaya, M.F, Zhihong, L, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC) 登録日 2009-07-10 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Crystal structure of human chromobox homolog 4 (CBX4) To be Published
3DMD	Structures and Conformations in Solution of the Signal Recognition Particle Receptor from the archaeon Pyrococcus furiosus 分子名称: GLYCEROL, SULFATE ION, Signal recognition particle receptor 著者 Egea, P.F, Tsuruta, H, Napetschnig, J, Walter, P, Stroud, R.M. 登録日 2008-06-30 公開日 2008-11-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structures of the Signal Recognition Particle Receptor from the Archaeon Pyrococcus furiosus: Implications for the Targeting Step at the Membrane. Plos One, 3, 2008
3DN0	Pentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant 分子名称: 1,2,3,4,5-pentafluorobenzene, 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ... 著者 Liu, L, Matthews, B.W. 登録日 2008-07-01 公開日 2008-11-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding. J.Mol.Biol., 385, 2009
3E0A	Thaumatin by Classical hanging drop method after high X-Ray dose on ESRF ID29 beamline 分子名称: L(+)-TARTARIC ACID, Thaumatin-1 著者 Tripathi, S, Pechkova, E, Nicolini, C. 登録日 2008-07-31 公開日 2009-07-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3E0I	Cu2+ substituted Aquifex aeolicus KDO8PS in complex with PEP 分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, COPPER (II) ION, PHOSPHATE ION, ... 著者 Gatti, D.L. 登録日 2008-07-31 公開日 2009-05-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.703 Å) 主引用文献 Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis. Biochemistry, 48, 2009

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