Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3DUF
DownloadVisualize
BU of 3duf by Molmil
Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex
分子名称: 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-[(1R)-1-HYDROXYETHYL]-3-METHYL-2-THIENYL}ETHYL TRIHYDROGEN DIPHOSPHATE, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, MAGNESIUM ION, ...
著者Pei, X.Y, Titman, C.M, Frank, R.A.W, Leeper, F.J, Luisi, B.F.
登録日2008-07-17
公開日2009-01-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Snapshots of catalysis in the e1 subunit of the pyruvate dehydrogenase multienzyme complex
Structure, 16, 2008
3DZN
DownloadVisualize
BU of 3dzn by Molmil
Thaumatin by LB nanotemplate method before high X-Ray dose on ESRF ID29 beamline
分子名称: L(+)-TARTARIC ACID, Thaumatin-1
著者Tripathi, S, Pechkova, E, Nicolini, C.
登録日2008-07-30
公開日2009-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DKR
DownloadVisualize
BU of 3dkr by Molmil
Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
分子名称: ACETATE ION, Esterase D
著者Bennett, M.D, Delabre, M.-L, Holland, R, Norris, G.E.
登録日2008-06-25
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of esterase D from lactobacillus rhamnosus
To be Published
4NNS
DownloadVisualize
BU of 4nns by Molmil
Crystal structure of FABP4 in complex with novel inhibitor
分子名称: 2,4,6-tri(propan-2-yl)benzenesulfonic acid, Fatty acid-binding protein, adipocyte
著者Liu, Q.F, Chen, T.T, Xu, Y.C.
登録日2013-11-19
公開日2014-11-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献The complex structure of FABP4 with novel inhibitors
To be Published
3DMD
DownloadVisualize
BU of 3dmd by Molmil
Structures and Conformations in Solution of the Signal Recognition Particle Receptor from the archaeon Pyrococcus furiosus
分子名称: GLYCEROL, SULFATE ION, Signal recognition particle receptor
著者Egea, P.F, Tsuruta, H, Napetschnig, J, Walter, P, Stroud, R.M.
登録日2008-06-30
公開日2008-11-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structures of the Signal Recognition Particle Receptor from the Archaeon Pyrococcus furiosus: Implications for the Targeting Step at the Membrane.
Plos One, 3, 2008
3DN0
DownloadVisualize
BU of 3dn0 by Molmil
Pentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
分子名称: 1,2,3,4,5-pentafluorobenzene, 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ...
著者Liu, L, Matthews, B.W.
登録日2008-07-01
公開日2008-11-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3E0A
DownloadVisualize
BU of 3e0a by Molmil
Thaumatin by Classical hanging drop method after high X-Ray dose on ESRF ID29 beamline
分子名称: L(+)-TARTARIC ACID, Thaumatin-1
著者Tripathi, S, Pechkova, E, Nicolini, C.
登録日2008-07-31
公開日2009-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3E0I
DownloadVisualize
BU of 3e0i by Molmil
Cu2+ substituted Aquifex aeolicus KDO8PS in complex with PEP
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, COPPER (II) ION, PHOSPHATE ION, ...
著者Gatti, D.L.
登録日2008-07-31
公開日2009-05-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis.
Biochemistry, 48, 2009
3DPB
DownloadVisualize
BU of 3dpb by Molmil
Crystal structure of the complex of the Caf1M chaperone with the mini-fiber of two Caf1 subunits (Caf1:Caf1), carrying the Ala9Val, Ala11Val, and Leu13Val mutations in the Gd donor strand
分子名称: Chaperone protein caf1M, F1 capsule antigen
著者Fooks, L.J, Yu, X, Moslehi-Mohebi, E, Tischenko, V, Knight, S.D, MacIntyre, S, Zavialov, A.V.
登録日2008-07-07
公開日2009-07-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Hydrophobicity and rigidity of binding segments enable CAF1M chaperone to act as assembly catalyst
To be published
3DQ6
DownloadVisualize
BU of 3dq6 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 2: Structure 18 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQL
DownloadVisualize
BU of 3dql by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 1: Structure 5 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4PMN
DownloadVisualize
BU of 4pmn by Molmil
Crystal structure of the Mycobacterium tuberculosis Tat-secreted protein Rv2525c in complex with MES (monoclinic crystal form I)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
著者Bellinzoni, M, Haouz, A, Shepard, W, Alzari, P.M.
登録日2014-05-22
公開日2014-10-08
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural studies suggest a peptidoglycan hydrolase function for the Mycobacterium tuberculosis Tat-secreted protein Rv2525c.
J.Struct.Biol., 188, 2014
3DQ3
DownloadVisualize
BU of 3dq3 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 2500 Atmospheres: Structure 22 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQD
DownloadVisualize
BU of 3dqd by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 2: Structure 12 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DVQ
DownloadVisualize
BU of 3dvq by Molmil
Proteinase K by LB nanotemplate method before high X-Ray dose on ESRF ID14-2 beamline
分子名称: CALCIUM ION, Proteinase K
著者Pechkova, E, Tripathi, S.K, Nicolini, C.
登録日2008-07-20
公開日2009-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DW1
DownloadVisualize
BU of 3dw1 by Molmil
Proteinase K by LB nanotemplate method after the third step high X-Ray dose on ESRF ID14-2 beamline
分子名称: CALCIUM ION, Proteinase K
著者Pechkova, E, Tripathi, S.K, Nicolini, C.
登録日2008-07-21
公開日2009-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DXR
DownloadVisualize
BU of 3dxr by Molmil
Crystal structure of the yeast inter-membrane space chaperone assembly TIM9.10
分子名称: Mitochondrial import inner membrane translocase subunit TIM10, Mitochondrial import inner membrane translocase subunit TIM9
著者Webb, C.T, Gulbis, J.M.
登録日2008-07-24
公開日2008-12-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional requirements for activity of the Tim9-Tim10 complex in mitochondrial protein import
Mol Biol Cell, 20, 2009
3DYI
DownloadVisualize
BU of 3dyi by Molmil
Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
分子名称: CHLORIDE ION, Esterase D
著者Bennett, M.D, Delabre, M.-L, Holland, R, Norris, G.E.
登録日2008-07-28
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
To be Published
4P9S
DownloadVisualize
BU of 4p9s by Molmil
Crystal structure of the mature form of rat DMGDH
分子名称: Dimethylglycine dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Luka, Z, Pakhomova, S, Loukachevitch, L.V, Newcomer, M.E, Wagner, C.
登録日2014-04-04
公開日2014-06-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Folate in demethylation: The crystal structure of the rat dimethylglycine dehydrogenase complexed with tetrahydrofolate.
Biochem.Biophys.Res.Commun., 449, 2014
3DQN
DownloadVisualize
BU of 3dqn by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 500 Atmospheres: Structure 3 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4PU8
DownloadVisualize
BU of 4pu8 by Molmil
Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 2.35
分子名称: Toxin-antitoxin system antidote transcriptional repressor Xre family
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
3E0W
DownloadVisualize
BU of 3e0w by Molmil
Crystal structure of pyruvate kinase from Leishmania mexicana
分子名称: Pyruvate kinase
著者Tulloch, L.B, Gillmore, L.A, Walkinshaw, M.D.
登録日2008-08-01
公開日2008-08-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Sulphate removal induces a major conformational change in Leishmania mexicana pyruvate kinase in the crystalline state.
J.Mol.Biol., 383, 2008
3DYD
DownloadVisualize
BU of 3dyd by Molmil
Human Tyrosine Aminotransferase
分子名称: PYRIDOXAL-5'-PHOSPHATE, Tyrosine aminotransferase
著者Karlberg, T, Moche, M, Andersson, J, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Lehtio, L, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wikstrom, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
登録日2008-07-27
公開日2008-08-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Human Tyrosine Aminotransferase
To be Published
4PH4
DownloadVisualize
BU of 4ph4 by Molmil
The crystal structure of Human VPS34 in complex with PIK-III
分子名称: 4'-(cyclopropylmethyl)-N~2~-(pyridin-4-yl)-4,5'-bipyrimidine-2,2'-diamine, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
著者Knapp, M.S, Elling, R.A.
登録日2014-05-04
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Selective VPS34 inhibitor blocks autophagy and uncovers a role for NCOA4 in ferritin degradation and iron homeostasis in vivo.
Nat.Cell Biol., 16, 2014
3EII
DownloadVisualize
BU of 3eii by Molmil
Zinc-bound glycoside hydrolase 61 E from Thielavia terrestris
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
著者Salbo, R, Welner, D, Lo Leggio, L, Harris, P, McFarland, K.
登録日2008-09-16
公開日2009-10-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family.
Biochemistry, 49, 2010

225681

件を2024-10-02に公開中

PDB statisticsPDBj update infoContact PDBjnumon