PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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4N2M	Crystal structure of Protein Arginine Deiminase 2 (E354A, 0 mM Ca2+) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Slade, D.J, Zhang, X, Fang, P, Dreyton, C.J, Zhang, Y, Gross, M.L, Guo, M, Coonrod, S.A, Thompson, P.R. 登録日 2013-10-05 公開日 2015-02-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.599 Å) 主引用文献 Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol., 10, 2015
4N2F	Crystal structure of Protein Arginine Deiminase 2 (D169A, 0 mM Ca2+) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Slade, D.J, Zhang, X, Fang, P, Dreyton, C.J, Zhang, Y, Gross, M.L, Guo, M, Coonrod, S.A, Thompson, P.R. 登録日 2013-10-04 公開日 2015-02-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol., 10, 2015
1DBT	CRYSTAL STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM BACILLUS SUBTILIS COMPLEXED WITH UMP 分子名称: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE, URIDINE-5'-MONOPHOSPHATE 著者 Appleby, T.C, Kinsland, C.L, Begley, T.P, Ealick, S.E. 登録日 1999-11-03 公開日 2000-03-06 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The crystal structure and mechanism of orotidine 5'-monophosphate decarboxylase. Proc.Natl.Acad.Sci.USA, 97, 2000
4N2G	Crystal structure of Protein Arginine Deiminase 2 (D169A, 10 mM Ca2+) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Slade, D.J, Zhang, X, Fang, P, Dreyton, C.J, Zhang, Y, Gross, M.L, Guo, M, Coonrod, S.A, Thompson, P.R. 登録日 2013-10-04 公開日 2015-02-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol., 10, 2015
4N28	Crystal structure of Protein Arginine Deiminase 2 (1 mM Ca2+) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Slade, D.J, Zhang, X, Fang, P, Dreyton, C.J, Zhang, Y, Gross, M.L, Guo, M, Coonrod, S.A, Thompson, P.R. 登録日 2013-10-04 公開日 2015-02-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.879 Å) 主引用文献 Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol., 10, 2015
3LHZ	Crystal structure of the mutant V201A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 1-(5'-PHOSPHO-BETA-D-RIBOFURANOSYL)BARBITURIC ACID, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2010-01-23 公開日 2010-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: "remote" residues that stabilize the active conformation. Biochemistry, 49, 2010
1DQW	CRYSTAL STRUCTURE OF OROTIDINE 5'-PHOSPHATE DECARBOXYLASE 分子名称: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE 著者 Milburn, M.V, Miller, B.G, Hassell, A.M, Wolfenden, R, Short, S.A. 登録日 2000-01-05 公開日 2000-03-20 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Anatomy of a proficient enzyme: the structure of orotidine 5'-monophosphate decarboxylase in the presence and absence of a potential transition state analog. Proc.Natl.Acad.Sci.USA, 97, 2000
3LHY	Crystal structure of the mutant I199A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 1-(5'-PHOSPHO-BETA-D-RIBOFURANOSYL)BARBITURIC ACID, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2010-01-23 公開日 2010-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: "remote" residues that stabilize the active conformation. Biochemistry, 49, 2010
3LTP	Crystal structure of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2010-02-16 公開日 2010-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: "remote" residues that stabilize the active conformation. Biochemistry, 49, 2010
2P09	Structural Insights into the Evolution of a Non-Biological Protein 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, PENTAETHYLENE GLYCOL, ... 著者 Smith, M, Rosenow, M, Wang, M, Allen, J.P, Szostak, J.W, Chaput, J.C. 登録日 2007-02-28 公開日 2007-06-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural insights into the evolution of a non-biological protein: importance of surface residues in protein fold optimization. PLoS ONE, 2, 2007
1DN3	NMR STRUCTURE OF A MODEL HYDROPHILIC AMPHIPATHIC HELICAL BASIC PEPTIDE 分子名称: HUMAN PLATELET FACTOR 4, SEGMENT 59-73 著者 Montserret, R, McLeish, M.J, Bockmann, A, Geourjon, C, Penin, F. 登録日 1999-12-16 公開日 2000-01-12 最終更新日 2024-04-10 実験手法 SOLUTION NMR 主引用文献 Involvement of electrostatic interactions in the mechanism of peptide folding induced by sodium dodecyl sulfate binding. Biochemistry, 39, 2000
2QYJ	Crystal structure of a designed full consensus ankyrin 分子名称: SULFATE ION, ankyrin NI3C 著者 Merz, T. 登録日 2007-08-15 公開日 2007-11-13 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Stabilizing ionic interactions in a full-consensus ankyrin repeat protein. J.Mol.Biol., 376, 2008
1CE8	CARBAMOYL PHOSPHATE SYNTHETASE FROM ESCHERICHIS COLI WITH COMPLEXED WITH THE ALLOSTERIC LIGAND IMP 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, INOSINIC ACID, ... 著者 Thoden, J.B, Raushel, F.M, Holden, H.M. 登録日 1999-03-18 公開日 1999-07-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The binding of inosine monophosphate to Escherichia coli carbamoyl phosphate synthetase. J.Biol.Chem., 274, 1999
1DQX	CRYSTAL STRUCTURE OF OROTIDINE 5'-PHOSPHATE DECARBOXYLASE COMPLEXED TO 6-HYDROXYURIDINE 5'-PHOSPHATE (BMP) 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE 著者 Milburn, M.V, Miller, B.G, Hassell, A.M, Wolfenden, R, Short, S.A. 登録日 2000-01-05 公開日 2000-03-20 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Anatomy of a proficient enzyme: the structure of orotidine 5'-monophosphate decarboxylase in the presence and absence of a potential transition state analog. Proc.Natl.Acad.Sci.USA, 97, 2000
1SVX	Crystal structure of a designed selected Ankyrin Repeat protein in complex with the Maltose Binding Protein 分子名称: Ankyrin Repeat Protein off7, Maltose-binding periplasmic protein 著者 Binz, H.K, Amstutz, P, Kohl, A, Stumpp, M.T, Briand, C, Forrer, P, Gruetter, M.G, Plueckthun, A. 登録日 2004-03-30 公開日 2004-05-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 High-affinity binders selected from designed ankyrin repeat protein libraries NAT.BIOTECHNOL., 22, 2004
1E0M	PROTOTYPE WW domain 分子名称: WWPROTOTYPE 著者 Macias, M.J, Gervais, V, Civera, C, Oschkinat, H. 登録日 2000-04-01 公開日 2000-04-20 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Analysis of Ww Domains and Design of a Ww Prototype Nat.Struct.Biol., 7, 2000
2LLE	Computational design of an eight-stranded (beta/alpha)-barrel from fragments of different folds 分子名称: Chemotaxis protein CheY, Imidazole glycerol phosphate synthase subunit HisF chimera 著者 Coles, M, Truffault, V, Eisenbeis, S, Proffitt, W, Meiler, J, Hocker, B. 登録日 2011-11-07 公開日 2012-03-21 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Potential of fragment recombination for rational design of proteins. J.Am.Chem.Soc., 134, 2012
1CS0	Crystal structure of carbamoyl phosphate synthetase complexed at CYS269 in the small subunit with the tetrahedral mimic l-glutamate gamma-semialdehyde 分子名称: ADENOSINE-5'-DIPHOSPHATE, CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT, CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT, ... 著者 Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M. 登録日 1999-08-16 公開日 1999-12-10 最終更新日 2019-11-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The small subunit of carbamoyl phosphate synthetase: snapshots along the reaction pathway. Biochemistry, 38, 1999
1D7T	NMR STRUCTURE OF AN ENGINEERED CONTRYPHAN CYCLIC PEPTIDE (MOTIF CPXXPXC) 分子名称: YNK-CONTRYPHAN 著者 Pallaghy, P.K, Norton, R.S. 登録日 1999-10-19 公開日 2000-09-13 最終更新日 2020-06-24 実験手法 SOLUTION NMR 主引用文献 The cyclic contryphan motif CPxXPXC, a robust scaffold potentially useful as an omega-conotoxin mimic. Biopolymers, 54, 2000
1E7R	GDP 4-keto-6-deoxy-D-mannose epimerase reductase Y136E 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETYLPHOSPHATE, GDP-FUCOSE SYNTHETASE, ... 著者 Rosano, C, Izzo, G, Bolognesi, M. 登録日 2000-09-07 公開日 2000-10-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Probing the Catalytic Mechanism of Gdp-4-Keto-6-Deoxy-D-Mannose Epimerase/Reductase by Kinetic and Crystallographic Characterization of Site-Specific Mutants J.Mol.Biol., 303, 2000
4DZU	Complex of 3-alpha bound to gp41-5 分子名称: 3-alpha, GLYCEROL, gp41-5 著者 Johnson, L.M, Mortenson, D.E, Yun, H.G, Horne, W.S, Ketas, T.J, Lu, M, Moore, J.P, Gellman, S.H. 登録日 2012-03-01 公開日 2012-05-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Enhancement of alpha-helix mimicry by an alpha / beta-peptide foldamer via incorporation of a dense ionic side-chain array. J.Am.Chem.Soc., 134, 2012
4DZV	Complex of 4-alpha/beta bound to gp41-5 分子名称: 4-alpha/beta, GLYCEROL, gp41-5 著者 Johnson, L.M, Mortenson, D.E, Yun, H.G, Horne, W.S, Ketas, T.J, Lu, M, Moore, J.P, Gellman, S.H. 登録日 2012-03-01 公開日 2012-05-02 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Enhancement of alpha-helix mimicry by an alpha / beta-peptide foldamer via incorporation of a dense ionic side-chain array. J.Am.Chem.Soc., 134, 2012
7TBN	LOV2-DARPIN fusion : D11 分子名称: CARBONATE ION, D11 LOV2-DARPin fusion, GLYCEROL 著者 Mittl, P. 登録日 2021-12-22 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 LOV2-DARPIN fusion : D11 To Be Published
7TAL	LOV2-DARPIN fusion : D4_deltaDARP 分子名称: D4_deltaDARP LOV2-DARPin fusion, FLAVIN MONONUCLEOTIDE, MAGNESIUM ION 著者 Mittl, P. 登録日 2021-12-21 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 LOV2-DARPIN fusion : D4_deltaDARP To Be Published
7TBO	LOV2-DARPIN fusion : D12 分子名称: D12 LOV2-DARPin fusion, GLYCEROL 著者 Mittl, P. 登録日 2021-12-22 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 LOV2-DARPIN fusion : D12 To Be Published

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