PDB: 5515 件ウェブページステータス検索Chemie searchBIRD

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8TNO	UNC_239 from Chroma generative model 分子名称: UNC_239 著者 Ng-Thow-Hing, C, Van Vlack, E.R, Lord, D.M. 登録日 2023-08-02 公開日 2023-11-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Illuminating protein space with a programmable generative model. Nature, 623, 2023
8TNM	UNC_079 from Chroma generative model 分子名称: UNC_079 著者 Ng-Thow-Hing, C, Van Vlack, E.R, Lord, D.M. 登録日 2023-08-02 公開日 2023-11-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Illuminating protein space with a programmable generative model. Nature, 623, 2023
4O5T	Crystal structure of Diels-Alderase CE20 in complex with a product analog 分子名称: 4-{[2-(phosphonooxy)ethyl]carbamoyl}benzyl [(1R,6S)-6-(dimethylcarbamoyl)cyclohex-2-en-1-yl]carbamate, Diisopropyl-fluorophosphatase 著者 Beck, T, Preiswerk, N, Mayer, C, Hilvert, D. 登録日 2013-12-20 公開日 2014-06-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase. Proc.Natl.Acad.Sci.USA, 111, 2014
4O60	Structure of ankyrin repeat protein 分子名称: ANK-N5C-317 著者 Ethayathulla, A.S, Guan, L. 登録日 2013-12-20 公開日 2015-03-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 A transcription blocker isolated from a designed repeat protein combinatorial library by in vivo functional screen. Sci Rep, 5, 2015
4O5S	Crystal structure of Diels-Alderase CE11 分子名称: Diisopropyl-fluorophosphatase 著者 Beck, T, Preiswerk, N, Mayer, C, Hilvert, D. 登録日 2013-12-20 公開日 2014-06-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase. Proc.Natl.Acad.Sci.USA, 111, 2014
6TJE	Crystal structure of the computationally designed Cake5 protein 分子名称: Cake5 著者 Mylemans, B, Laier, I, Noguchi, H, Voet, A.R.D. 登録日 2019-11-26 公開日 2020-05-06 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
3QHT	Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO 分子名称: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3 著者 Koide, S, Gilbreth, R.N. 登録日 2011-01-26 公開日 2011-05-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design. Proc.Natl.Acad.Sci.USA, 108, 2011
6TJH	Crystal structure of the computationally designed Cake9 protein 分子名称: Cake9, GLYCEROL, SULFATE ION 著者 Mylemans, B, Laier, I, Noguchi, H, Voet, A.R.D. 登録日 2019-11-26 公開日 2020-05-06 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
6TJC	Crystal structure of the computationally designed Cake3 protein 分子名称: Cake3, GLYCEROL, PHOSPHATE ION 著者 Laier, I, Mylemans, B, Voet, A.R.D, Noguchi, H. 登録日 2019-11-26 公開日 2020-05-06 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
6TJG	Crystal structure of the computationally designed Cake8 protein 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Cake8 著者 Laier, I, Mylemans, B, Noguchi, H, Voet, A.R.D. 登録日 2019-11-26 公開日 2020-05-06 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
8SJH	Zn-Bound Structure of Computationally Designed Homotrimer TP1 分子名称: CALCIUM ION, CHLORIDE ION, Topoisomerase 1, ... 著者 Hoffnagle, A.M, Tezcan, F.A. 登録日 2023-04-18 公開日 2023-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
8SJF	Apo Structure of Computationally Designed Homotrimer Tet4 分子名称: Tet4 著者 Hoffnagle, A.H, Tezcan, F.A. 登録日 2023-04-18 公開日 2023-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
8SJG	Zn-Bound Structure of Computationally Designed Homotrimer Tet4 分子名称: Tet4, ZINC ION 著者 Hoffnagle, A.M, Tezcan, F.A. 登録日 2023-04-18 公開日 2023-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
8SJI	Apo Structure of Computationally Designed Homotrimer TP1 分子名称: CALCIUM ION, CHLORIDE ION, Topoisomerase 1 著者 Hoffnagle, A.M, Tezcan, F.A. 登録日 2023-04-18 公開日 2023-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Atomically Accurate Design of Metalloproteins with Predefined Coordination Geometries. J.Am.Chem.Soc., 145, 2023
4NW9	Crystal structure of macrocycles containing Abeta17-23 (LVF(MEA)AED) and Abeta30-36 (AIIGL(ORN)V) 分子名称: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LVF(MEA)AED(ORN)AIIGL(ORN)V, SODIUM ION 著者 Spencer, R.K, Li, H, Nowick, J.S. 登録日 2013-12-05 公開日 2014-04-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36). J.Am.Chem.Soc., 136, 2014
6V58	Coiled-coil Trimer with Glu:Norleucine:Lys Triad 分子名称: Coiled-coil Trimer with Glu:Norleucine:Lys Triad 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-12-03 公開日 2020-04-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.201 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6V5G	Coiled-coil Trimer with Ala:Leu:Lys Triad 分子名称: Coiled-coil Trimer with Ala:Leu:Lys Triad, PENTAETHYLENE GLYCOL 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-12-04 公開日 2020-04-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
4P4V	Hexamer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK 分子名称: CHLORIDE ION, CYCLIC HEXADECAPEPTIDE (ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK, SULFATE ION 著者 Spencer, R.K, Nowick, J.S. 登録日 2014-03-13 公開日 2015-05-06 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc., 137, 2015
4P4Z	Octomer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVT(MVA)TVK 分子名称: CYCLIC HEXADECAPEPTIDE (ORN)YLL(PHI)YTE(ORN)KVT(MVA)TVK, PHOSPHATE ION, SODIUM ION 著者 Spencer, R.K, Nowick, J.S. 登録日 2014-03-13 公開日 2015-05-06 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc., 137, 2015
6V57	Coiled-coil Trimer with Glu:Norvaline:Lys Triad 分子名称: Coiled-coil Trimer with Glu:Norvaline:Lys Triad 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-12-03 公開日 2020-04-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.696 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6V5I	Coiled-coil Trimer with Ala:Leu:Ala Triad 分子名称: Coiled-coil Trimer with Ala:Leu:Ala Triad, PENTAETHYLENE GLYCOL 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-12-04 公開日 2020-04-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6V5J	Coiled-coil Trimer with Glu:Leu:Ala Triad 分子名称: Coiled-coil Trimer with Glu:Leu:Ala Triad 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-12-04 公開日 2020-04-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
4QFV	Crystal structure of a unique ankyrin 分子名称: ACETATE ION, ANK-N5C-281 著者 Ethayathulla, A.S, Tikhonova, E.B, Guan, L. 登録日 2014-05-21 公開日 2015-05-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.999 Å) 主引用文献 A transcription blocker isolated from a designed repeat protein combinatorial library by in vivo functional screen. Sci Rep, 5, 2015
6TJD	Crystal structure of the computationally designed Cake4 protein 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Cake4 著者 Laier, I, Mylemans, B, Noguchi, H, Voet, A.R.D. 登録日 2019-11-26 公開日 2020-05-06 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural plasticity of a designer protein sheds light on beta-propeller protein evolution. Febs J., 288, 2021
4PJR	Crystal structure of designed cPPR-NRE protein 分子名称: MAGNESIUM ION, Pentatricopeptide repeat protein 著者 Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O. 登録日 2014-05-12 公開日 2014-12-24 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 An artificial PPR scaffold for programmable RNA recognition. Nat Commun, 5, 2014

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