PDB: 30476 件ウェブページステータス検索Chemie searchBIRD

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5A8R	METHYL-COENZYME M REDUCTASE II FROM METHANOTHERMOBACTER MARBURGENSIS AT 2.15 A RESOLUTION 分子名称: 1-THIOETHANESULFONIC ACID, Coenzyme B, FACTOR 430, ... 著者 Wagner, T, Ermler, U. 登録日 2015-07-16 公開日 2016-08-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation. Angew.Chem.Int.Ed.Engl., 55, 2016
5A0Y	METHYL-COENZYME M REDUCTASE FROM METHANOTHERMOBACTER MARBURGENSIS AT 1.1 A RESOLUTION 分子名称: 1-THIOETHANESULFONIC ACID, CHLORIDE ION, Coenzyme B, ... 著者 Wagner, T, Ermler, U. 登録日 2015-04-24 公開日 2016-05-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation. Angew.Chem.Int.Ed.Engl., 55, 2016
5D4T	SeMet-labelled HcgC from Methanocaldococcus jannaschii in space group P212121 分子名称: Uncharacterized protein MJ0489 著者 Fujishiro, T, Ermler, U, Shima, S. 登録日 2015-08-09 公開日 2016-07-20 最終更新日 2016-08-10 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angew.Chem.Int.Ed.Engl., 55, 2016
5AIQ	Crystal structure of ligand-free NadR 分子名称: TRANSCRIPTIONAL REGULATOR, MARR FAMILY 著者 Liguori, A, Malito, E, Bottomley, M.J. 登録日 2015-02-16 公開日 2016-03-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.716 Å) 主引用文献 Molecular Basis of Ligand-Dependent Regulation of Nadr, the Transcriptional Repressor of Meningococcal Virulence Factor Nada. Plos Pathog., 12, 2016
7MDH	STRUCTURAL BASIS FOR LIGHT ACITVATION OF A CHLOROPLAST ENZYME. THE STRUCTURE OF SORGHUM NADP-MALATE DEHYDROGENASE IN ITS OXIDIZED FORM 分子名称: PROTEIN (MALATE DEHYDROGENASE), ZINC ION 著者 Johansson, K, Ramaswamy, S, Saarinen, M, Lemaire-Chamley, M, Issakidis-Bourguet, E, Miginiac-Maslow, M, Eklund, H. 登録日 1999-02-16 公開日 1999-06-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis for light activation of a chloroplast enzyme: the structure of sorghum NADP-malate dehydrogenase in its oxidized form. Biochemistry, 38, 1999
5D4U	SAM-bound HcgC from Methanocaldococcus jannaschii 分子名称: S-ADENOSYLMETHIONINE, SULFATE ION, Uncharacterized protein MJ0489 著者 Fujishiro, T, Ermler, U, Shima, S. 登録日 2015-08-09 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angew.Chem.Int.Ed.Engl., 55, 2016
5D5Q	HcgB from Methanocaldococcus jannaschii with the pyridinol derived from FeGP cofactor of [Fe]-hydrogenase 分子名称: (4,6-dihydroxy-3,5-dimethylpyridin-2-yl)acetic acid, Uncharacterized protein MJ0488, Guanylyltransferase 著者 Fujishiro, T, Ermler, U, Shima, S. 登録日 2015-08-11 公開日 2016-10-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Towards artificial methanogenesis: biosynthesis of the [Fe]-hydrogenase cofactor and characterization of the semi-synthetic hydrogenase. Faraday Discuss., 198, 2017
5D5O	HcgC from Methanocaldococcus jannaschii 分子名称: SULFATE ION, Uncharacterized protein MJ0489 著者 Fujishiro, T, Ermler, U, Shima, S. 登録日 2015-08-11 公開日 2016-07-20 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angew.Chem.Int.Ed.Engl., 55, 2016
5D4V	HcgC with SAH and a guanylylpyridinol (GP) derivative 分子名称: 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ... 著者 Fujishiro, T, Ermler, U, Shima, S. 登録日 2015-08-09 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angew.Chem.Int.Ed.Engl., 55, 2016
5D5T	SeMet-labelled HcgC from Methanocaldococcus jannaschii in P1 space group 分子名称: Uncharacterized protein MJ0489 著者 Fujishiro, T, Ermler, U, Shima, S. 登録日 2015-08-11 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Identification of HcgC as a SAM-Dependent Pyridinol Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis. Angew.Chem.Int.Ed.Engl., 55, 2016
5D5P	HcgB from Methanococcus maripaludis 分子名称: HcgB 著者 Fujishiro, T, Ermler, U, Shima, S. 登録日 2015-08-11 公開日 2016-10-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Towards artificial methanogenesis: biosynthesis of the [Fe]-hydrogenase cofactor and characterization of the semi-synthetic hydrogenase. Faraday Discuss., 198, 2017
5DJQ	The structure of CBB3 cytochrome oxidase. 分子名称: CALCIUM ION, COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoN1, ... 著者 Buschmann, S, Warkentin, E, Xie, H, Kohlstaedt, M, Langer, J.D, Ermler, U, Michel, H. 登録日 2015-09-02 公開日 2016-01-13 最終更新日 2016-07-27 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 The structure of cbb3 cytochrome oxidase provides insights into proton pumping. Science, 329, 2010
7QH2	Cryo-EM structure of Ldh-EtfAB complex from Acetobacterium woodii 分子名称: FE (III) ION, FLAVIN-ADENINE DINUCLEOTIDE, Lactate dehydrogenase (NAD(+),ferredoxin) subunit LctB, ... 著者 Kayastha, K, Ermler, U. 登録日 2021-12-10 公開日 2022-06-29 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.43 Å) 主引用文献 Structure-based electron-confurcation mechanism of the Ldh-EtfAB complex. Elife, 11, 2022
9BBG	Co-crystal structure of human DDB1 bound to fragment UB028671 分子名称: 1,2-ETHANEDIOL, 1H-indol-6-amine, DNA damage-binding protein 1, ... 著者 Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC) 登録日 2024-04-05 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Co-crystal structure of human DDB1 bound to fragment UB028671 To be published
9BBE	Co-crystal structure of human DDB1 bound to fragment UB028668 分子名称: 5-(4-methoxyphenyl)-3-[(3S)-pyrrolidin-3-yl]-1,2,4-oxadiazole, DNA damage-binding protein 1, L(+)-TARTARIC ACID, ... 著者 Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC) 登録日 2024-04-05 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Co-crystal structure of human DDB1 bound to fragment UB028668 To be published
9BBI	Co-crystal structure of human DDB1 bound to fragment UB028669 分子名称: 3-([1,3]oxazolo[4,5-b]pyridin-2-yl)aniline, DNA damage-binding protein 1, L(+)-TARTARIC ACID, ... 著者 Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC) 登録日 2024-04-05 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Co-crystal structure of human DDB1 bound to fragment UB028669 To be published
9BBH	Co-crystal structure of human DDB1 bound to fragment UB028670 分子名称: 1,2-ETHANEDIOL, 4-methoxy-1H-indole, DNA damage-binding protein 1, ... 著者 Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC) 登録日 2024-04-05 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Co-crystal structure of human DDB1 bound to fragment UB028670 To be published
7N9I	1.4A Structure of Drosophila melanogaster Frataxin 分子名称: Frataxin homolog, mitochondrial, SULFATE ION 著者 Brunzelle, J.S, Stemmler, T.L. 登録日 2021-06-17 公開日 2022-06-22 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Drosophila melanogaster Frataxin Structure and Iron Binding Interactions To Be Published
8SRS	SpRY-Cas9:gRNA complex targeting TAC PAM DNA 分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, NTS, ... 著者 Hibshman, G.N, Bravo, J.P.K, Taylor, D.W. 登録日 2023-05-06 公開日 2024-05-01 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.79 Å) 主引用文献 Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun, 15, 2024
8T6S	SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 10 bp R-loop 分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ... 著者 Hibshman, G.N, Bravo, J.P.K, Taylor, D.W. 登録日 2023-06-18 公開日 2024-05-01 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun, 15, 2024
8T6T	SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 13 bp R-loop 分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ... 著者 Hibshman, G.N, Bravo, J.P.K, Taylor, D.W. 登録日 2023-06-18 公開日 2024-05-01 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun, 15, 2024
8SQH	SpRY-Cas9:gRNA complex targeting TTC PAM DNA 分子名称: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, NTS, ... 著者 Hibshman, G.N, Bravo, J.P.K, Taylor, D.W. 登録日 2023-05-04 公開日 2024-05-01 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.69 Å) 主引用文献 Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun, 15, 2024
8T6Y	SpRY-Cas9:gRNA complex bound to non-target DNA with 1 bp R-loop 分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ... 著者 Hibshman, G.N, Bravo, J.P.K, Taylor, D.W. 登録日 2023-06-19 公開日 2024-05-01 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.88 Å) 主引用文献 Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun, 15, 2024
8T6O	SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 0 bp R-loop 分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ... 著者 Hibshman, G.N, Bravo, J.P.K, Taylor, D.W. 登録日 2023-06-16 公開日 2024-05-01 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun, 15, 2024
8T76	SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 3 bp R-loop 分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ... 著者 Hibshman, G.N, Bravo, J.P.K, Taylor, D.W. 登録日 2023-06-19 公開日 2024-05-01 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.42 Å) 主引用文献 Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun, 15, 2024

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