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1EP0
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HIGH RESOLUTION CRYSTAL STRUCTURE OF DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
分子名称: DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE
著者Christendat, D, Saridakis, V, Bochkarev, A, Pai, E.F, Arrowsmith, C.H, Edwards, A.M, Northeast Structural Genomics Consortium (NESG)
登録日2000-03-24
公開日2000-12-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of dTDP-4-keto-6-deoxy-D-hexulose 3,5-epimerase from Methanobacterium thermoautotrophicum complexed with dTDP.
J.Biol.Chem., 275, 2000
3M1P
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Structure of ribose 5-phosphate isomerase type B from Trypanosoma cruzi, soaked with allose-6-phosphate
分子名称: PHOSPHATE ION, Ribose 5-phosphate isomerase
著者Naworyta, A, Mowbray, S.L, Stern, A.L.
登録日2010-03-05
公開日2011-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of type B ribose 5-phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family.
Febs J., 278, 2011
4O9K
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Crystal structure of the CBS pair of a putative D-arabinose 5-phosphate isomerase from Methylococcus capsulatus in complex with CMP-Kdo
分子名称: Arabinose 5-phosphate isomerase, CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, GLYCEROL
著者Shabalin, I.G, Cooper, D.R, Shumilin, I.A, Zimmerman, M.D, Majorek, K.A, Hammonds, J, Hillerich, B.S, Nawar, A, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-01-02
公開日2014-01-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure and kinetic properties of D-arabinose 5-phosphate isomerase from Methylococcus capsulatus
To be Published
3HE8
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Structural study of Clostridium thermocellum Ribose-5-Phosphate Isomerase B
分子名称: GLYCEROL, Ribose-5-phosphate isomerase
著者Kang, L.W, Kim, J.K, Jung, J.H, Hong, M.K.
登録日2009-05-08
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Clostridium thermocellum ribose-5-phosphate isomerase B reveals properties critical for fast enzyme kinetics.
Appl.Microbiol.Biotechnol., 90, 2011
3HHE
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Crystal structure of ribose-5-phosphate isomerase A from Bartonella henselae
分子名称: CHLORIDE ION, POTASSIUM ION, RIBULOSE-5-PHOSPHATE, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-05-15
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of ribose-5-phosphate isomerase A from Bartonella henselae
To be Published
2ZVI
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Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
著者Tamura, H, Yadani, T, Kai, Y, Inoue, T, Matsumura, H.
登録日2008-11-07
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the apo decarbamylated form of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
Acta Crystallogr.,Sect.D, 65, 2009
1LK7
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Structure of D-Ribose-5-Phosphate Isomerase from in complex with phospho-erythronic acid
分子名称: CHLORIDE ION, D-4-PHOSPHOERYTHRONIC ACID, D-Ribose-5-Phosphate Isomerase, ...
著者Ishikawa, K, Matsui, I, Payan, F, Cambillau, C, Ishida, H, Kawarabayasi, Y, Kikuchi, H, Roussel, A.
登録日2002-04-24
公開日2002-07-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Hyperthermostable D-Ribose-5-Phosphate Isomerase from Pyrococcus horikoshii Characterization and Three-Dimensional Structure
STRUCTURE, 10, 2002
1JDI
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BU of 1jdi by Molmil
CRYSTAL STRUCTURE OF L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE
分子名称: L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE, ZINC ION
著者Luo, Y, Samuel, J, Mosimann, S.C, Lee, J.E, Tanner, M.E, Strynadka, N.C.J.
登録日2001-06-13
公開日2002-01-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of L-ribulose-5-phosphate 4-epimerase: an aldolase-like platform for epimerization.
Biochemistry, 40, 2001
1K0W
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CRYSTAL STRUCTURE OF L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE
分子名称: L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE, ZINC ION
著者Luo, Y, Samuel, J, Mosimann, S.C, Lee, J.E, Strynadka, N.C.J.
登録日2001-09-21
公開日2003-01-28
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of L-ribulose-5-phosphate 4-epimerase: an aldolase-like platform for epimerization
Biochemistry, 40, 2001
4LRF
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Phosphopentomutase S154G variant soaked with ribose 5-phosphate
分子名称: 5-O-phosphono-alpha-D-ribofuranose, GLYCEROL, MANGANESE (II) ION, ...
著者Birmingham, W.A, Starbird, C.A, Panosian, T.D, Nannemann, D.P, Iverson, T.M, Bachmann, B.O.
登録日2013-07-19
公開日2013-07-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bioretrosynthetic construction of a didanosine biosynthetic pathway.
Nat.Chem.Biol., 10, 2014
3IXQ
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Structure of ribose 5-phosphate isomerase a from methanocaldococcus jannaschii
分子名称: ACETATE ION, CHLORIDE ION, Ribose-5-phosphate isomerase A, ...
著者Antonyuk, S.V, Ellis, M.J, Strange, R.W, Hasnain, S.S, Bessho, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-09-04
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献The structure of an archaeal ribose-5-phosphate isomerase from Methanocaldococcus jannaschii (MJ1603).
Acta Crystallogr.,Sect.F, 65, 2009
1H1Z
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The structure of the cytosolic D-ribulose-5-phosphate 3-epimerase from rice complexed with sulfate and zinc
分子名称: D-RIBULOSE-5-PHOSPHATE 3-EPIMERASE, SULFATE ION, ZINC ION
著者Jelakovic, S, Schulz, G.E.
登録日2002-07-25
公開日2003-01-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure and Catalytic Mechanism of the Cytosolic D-Ribulose-5-Phosphate 3-Epimerase from Rice
J.Mol.Biol., 326, 2003
1LK5
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Structure of the D-Ribose-5-Phosphate Isomerase from Pyrococcus horikoshii
分子名称: CHLORIDE ION, D-Ribose-5-Phosphate Isomerase, SODIUM ION
著者Ishikawa, K, Matsui, I, Payan, F, Cambillau, C, Ishida, H, Kawarabayasi, Y, Kikuchi, H, Roussel, A.
登録日2002-04-24
公開日2002-07-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A hyperthermostable D-ribose-5-phosphate isomerase from Pyrococcus horikoshii characterization and three-dimensional structure.
Structure, 10, 2002
1H1Y
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The structure of the cytosolic D-ribulose-5-phosphate 3-epimerase from rice complexed with sulfate
分子名称: D-RIBULOSE-5-PHOSPHATE 3-EPIMERASE, SULFATE ION
著者Jelakovic, S, Schulz, G.E.
登録日2002-07-25
公開日2003-01-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structure and Catalytic Mechanism of the Cytosolic D-Ribulose-5-Phosphate 3-Epimerase from Rice
J.Mol.Biol., 326, 2003
1UJ4
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Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase
分子名称: CHLORIDE ION, ribose 5-phosphate isomerase
著者Hamada, K, Ago, H, Sugahara, M, Nodake, Y, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-07-26
公開日2004-07-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
4GMK
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BU of 4gmk by Molmil
Crystal Structure of Ribose 5-Phosphate Isomerase from the Probiotic Bacterium Lactobacillus salivarius UCC118
分子名称: PHOSPHATE ION, POTASSIUM ION, Ribose-5-phosphate isomerase A
著者Lobley, C.M.C, Aller, P, Douangamath, A, Reddivari, Y, Bumann, M, Bird, L.E, Brandao-Neto, J, Owens, R.J, O'Toole, P.W, Walsh, M.A.
登録日2012-08-16
公開日2012-08-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structure of ribose 5-phosphate isomerase from the probiotic bacterium Lactobacillus salivarius UCC118.
Acta Crystallogr.,Sect.F, 68, 2012
3K8C
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Complex of Trypanosoma cruzi ribose 5-phosphate isomerase type B with 4-deoxy-4-phospho-D-erythronohydroxamic acid
分子名称: 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID, Ribose 5-phosphate isomerase
著者Naworyta, A, Mowbray, S.L, Stern, A.L.
登録日2009-10-14
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of type B ribose 5-phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family.
Febs J., 278, 2011
3K7O
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Structure of type B ribose 5-phosphate isomerase from Trypanosoma cruzi
分子名称: Ribose 5-phosphate isomerase
著者Naworyta, A, Mowbray, S.L, Stern, A.L.
登録日2009-10-13
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of type B ribose 5-phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family.
Febs J., 278, 2011
2VVO
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Crystal structure of Mycobacterium tuberculosis ribose-5-phosphate isomerase B in complex with alpha d-allose 6-phosphate
分子名称: 6-O-phosphono-alpha-D-allopyranose, RIBOSE-5-PHOSPHATE ISOMERASE B
著者Roos, A.K, Mariano, S, Kowalinski, E, Salmon, L, Mowbray, S.L.
登録日2008-06-10
公開日2008-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献D-Ribose-5-Phosphate Isomerase B from Escherichia Coli is Also a Functional D-Allose-6-Phosphate Isomerase, While the Mycobacterium Tuberculosis Enzyme is not.
J.Mol.Biol., 382, 2008
1SNN
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3,4-dihydroxy-2-butanone 4-phosphate synthase from Methanococcus jannaschii
分子名称: 3,4-dihydroxy-2-butanone 4-phosphate synthase, CALCIUM ION, RIBULOSE-5-PHOSPHATE, ...
著者Steinbacher, S, Schiffmann, S, Huber, R, Bacher, A, Fischer, M.
登録日2004-03-11
公開日2004-07-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Metal sites in 3,4-dihydroxy-2-butanone 4-phosphate synthase from Methanococcus jannaschii in complex with the substrate ribulose 5-phosphate.
Acta Crystallogr.,Sect.D, 60, 2004
5BS3
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Crystal Structure of S.A. gyrase in complex with Compound 7
分子名称: (4R)-3-fluoro-4-hydroxy-4-{[(1r,4R)-4-{[(3-oxo-3,4-dihydro-2H-pyrido[3,2-b][1,4]oxazin-6-yl)methyl]amino}-2-oxabicyclo[2.2.2]oct-1-yl]methyl}-4,5-dihydro-7H-pyrrolo[3,2,1-de][1,5]naphthyridin-7-one, DNA gyrase subunit A and B, DNA/RNA (5'-R(P*AP*GP*CP*CP*G)-D(P*T)-R(P*AP*GP*GP*GP*CP*CP*C)-D(P*T)-R(P*AP*CP*GP*GP*C)-D(P*T)-3'), ...
著者Lu, J, Patel, S, Soisson, S.
登録日2015-06-01
公開日2015-06-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Tricyclic 1,5-naphthyridinone oxabicyclooctane-linked novel bacterial topoisomerase inhibitors as broad-spectrum antibacterial agents-SAR of left-hand-side moiety (Part-2).
Bioorg.Med.Chem.Lett., 25, 2015
2VVR
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Crystal structure of the H99N mutant of ribose-5-phosphate isomerase B from E. coli soaked with ribose 5-phosphate
分子名称: RIBOSE-5-PHOSPHATE ISOMERASE B
著者Roos, A.K, Mowbray, S.L.
登録日2008-06-11
公開日2008-07-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献D-Ribose-5-Phosphate Isomerase B from Escherichia Coli is Also a Functional D-Allose-6-Phosphate Isomerase, While the Mycobacterium Tuberculosis Enzyme is not.
J.Mol.Biol., 382, 2008
1USL
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Structure Of Mycobacterium tuberculosis Ribose-5-Phosphate Isomerase, RpiB, Rv2465c, Complexed With Phosphate.
分子名称: PHOSPHATE ION, RIBOSE 5-PHOSPHATE ISOMERASE B
著者Roos, A.K, Andersson, C.E, Unge, T, Jones, T.A, Mowbray, S.L.
登録日2003-11-25
公開日2004-01-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Mycobacterium Tuberculosis Ribose-5-Phosphate Isomerase Has a Known Fold, But a Novel Active Site
J.Mol.Biol., 335, 2004
3QD5
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Crystal structure of a putative ribose-5-phosphate isomerase from Coccidioides immitis solved by combined iodide ion SAD and MR
分子名称: 1,2-ETHANEDIOL, IODIDE ION, putative ribose-5-phosphate isomerase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-01-17
公開日2011-02-09
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of a ribose-5-phosphate isomerase B from the pathogenic fungus Coccidioides immitis.
Bmc Struct.Biol., 11, 2011
3CQK
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Crystal Structure of L-xylulose-5-phosphate 3-epimerase UlaE (form B) complex with Zn2+ and sulfate
分子名称: L-ribulose-5-phosphate 3-epimerase ulaE, SULFATE ION, ZINC ION
著者Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2008-04-03
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structure of L-xylulose-5-Phosphate 3-epimerase (UlaE) from the anaerobic L-ascorbate utilization pathway of Escherichia coli: identification of a novel phosphate binding motif within a TIM barrel fold.
J.Bacteriol., 190, 2008

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