Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6TM3
DownloadVisualize
BU of 6tm3 by Molmil
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylorubrum extorquens AM1 in a close conformation containing NADP+ and methylene-H4MPT
分子名称: 1,2-ETHANEDIOL, 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN, Bifunctional protein MdtA, ...
著者Wagner, T, Huang, G, Demmer, U, Warkentin, E, Ermler, U, Shima, S.
登録日2019-12-03
公開日2020-02-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献The Hydride Transfer Process in NADP-dependent Methylene-tetrahydromethanopterin Dehydrogenase.
J.Mol.Biol., 432, 2020
4WY2
DownloadVisualize
BU of 4wy2 by Molmil
Crystal structure of universal stress protein E from Proteus mirabilis in complex with UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-N-acetyl-alpha-glucosamine
分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
著者Shumilin, I.A, Shabalin, I.G, Handing, K.B, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2014-11-15
公開日2014-11-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of universal stress protein E from Proteus mirabilis incomplex withUDP-3-O-[(3R)-3-hydroxytetradecanoyl]-N-acetyl-alpha-glucosamine
to be published
6TTU
DownloadVisualize
BU of 6ttu by Molmil
Ubiquitin Ligation to substrate by a cullin-RING E3 ligase at 3.7A resolution: NEDD8-CUL1-RBX1 N98R-SKP1-monomeric b-TRCP1dD-IkBa-UB~UBE2D2
分子名称: CYS-LYS-LYS-ALA-ARG-HIS-ASP-SEP-GLY, Cullin-1, E3 ubiquitin-protein ligase RBX1, ...
著者Baek, K, Prabu, J.R, Schulman, B.A.
登録日2019-12-30
公開日2020-02-12
最終更新日2020-03-04
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献NEDD8 nucleates a multivalent cullin-RING-UBE2D ubiquitin ligation assembly.
Nature, 578, 2020
6T25
DownloadVisualize
BU of 6t25 by Molmil
Cryo-EM structure of phalloidin-Alexa Flour-546-stabilized F-actin (copolymerized)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Pospich, S, Merino, F, Raunser, S.
登録日2019-10-07
公開日2020-03-04
最終更新日2020-04-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural Effects and Functional Implications of Phalloidin and Jasplakinolide Binding to Actin Filaments.
Structure, 28, 2020
6T23
DownloadVisualize
BU of 6t23 by Molmil
Cryo-EM structure of jasplakinolide-stabilized F-actin (aged)
分子名称: (4~{R},7~{R},10~{S},13~{S},15~{E},19~{S})-10-(4-azanylbutyl)-4-(4-hydroxyphenyl)-7-(1~{H}-indol-3-ylmethyl)-8,13,15,19-tetramethyl-1-oxa-5,8,11-triazacyclononadec-15-ene-2,6,9,12-tetrone, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
著者Pospich, S, Merino, F, Raunser, S.
登録日2019-10-07
公開日2020-03-04
最終更新日2020-04-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural Effects and Functional Implications of Phalloidin and Jasplakinolide Binding to Actin Filaments.
Structure, 28, 2020
4YGO
DownloadVisualize
BU of 4ygo by Molmil
Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state
分子名称: CALCIUM ION, METHANOL, Spermidine n1-acetyltransferase
著者Filippova, E.V, Minasov, G, Kiryukhina, O, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-02-26
公開日2015-10-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Substrate-Induced Allosteric Change in the Quaternary Structure of the Spermidine N-Acetyltransferase SpeG.
J.Mol.Biol., 427, 2015
2I5D
DownloadVisualize
BU of 2i5d by Molmil
Crystal Structure of Human Inosine Triphosphate Pyrophosphatase
分子名称: inosine triphosphate pyrophosphohydrolase
著者Porta, J.C, Kozmin, S.G, Pavlov, Y.I, Borgstahl, G.E.O.
登録日2006-08-24
公開日2006-09-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structure of the orthorhombic form of human inosine triphosphate pyrophosphatase.
Acta Crystallogr.,Sect.F, 62, 2006
6T24
DownloadVisualize
BU of 6t24 by Molmil
Cryo-EM structure of jasplakinolide-stabilized F-actin (aged)
分子名称: (4~{R},7~{R},10~{S},13~{S},15~{E},19~{S})-10-(4-azanylbutyl)-4-(4-hydroxyphenyl)-7-(1~{H}-indol-3-ylmethyl)-8,13,15,19-tetramethyl-1-oxa-5,8,11-triazacyclononadec-15-ene-2,6,9,12-tetrone, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
著者Pospich, S, Merino, F, Raunser, S.
登録日2019-10-07
公開日2020-03-04
最終更新日2020-04-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Effects and Functional Implications of Phalloidin and Jasplakinolide Binding to Actin Filaments.
Structure, 28, 2020
4YYC
DownloadVisualize
BU of 4yyc by Molmil
Crystal structure of trimethylamine methyltransferase from Sinorhizobium meliloti in complex with unknown ligand
分子名称: CHLORIDE ION, Putative trimethylamine methyltransferase, UNKNOWN LIGAND
著者Shabalin, I.G, Porebski, P.J, Gasiorowska, O.A, Handing, K.B, Niedzialkowska, E, Cymborowski, M.T, Cooper, D.R, Stead, M, Hammonds, J, Ahmed, M, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-03-23
公開日2015-04-08
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Protein purification and crystallization artifacts: The tale usually not told.
Protein Sci., 25, 2016
6RZW
DownloadVisualize
BU of 6rzw by Molmil
Structure of s-Mgm1 decorating the inner surface of tubulated lipid membranes in the GTPgammaS bound state
分子名称: Putative mitochondrial dynamin protein
著者Faelber, K, Dietrich, L, Noel, J.K, Sanchez, R, Kudryashev, M, Kuelbrandt, W, Daumke, O.
登録日2019-06-13
公開日2019-07-24
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (18.799999 Å)
主引用文献Structure and assembly of the mitochondrial membrane remodelling GTPase Mgm1.
Nature, 571, 2019
4XAP
DownloadVisualize
BU of 4xap by Molmil
Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021
分子名称: Aldo-keto reductase
著者Gasiorowska, O.A, Handing, K.B, Shabalin, I.G, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-12-15
公開日2014-12-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021
to be published
8U3N
DownloadVisualize
BU of 8u3n by Molmil
Structure of P450Blt from Micromonospora sp. MW-13
分子名称: Cytochrome P450-SU1, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Hansen, M.H, Cryle, M.J, Zhao, Y.
登録日2023-09-08
公開日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Insights into a Side Chain Cross-Linking Biarylitide P450 from RiPP Biosynthesis
Acs Catalysis, 2024
8UKZ
DownloadVisualize
BU of 8ukz by Molmil
Structure of P450Blt from Micromonospora sp. MW-13 with E238A Mutation
分子名称: ACETATE ION, Cytochrome P450-SU1, DI(HYDROXYETHYL)ETHER, ...
著者Hansen, M.H, Cryle, M.J.
登録日2023-10-15
公開日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Insights into a Side Chain Cross-Linking Biarylitide P450 from RiPP Biosynthesis
Acs Catalysis, 2024
8U2M
DownloadVisualize
BU of 8u2m by Molmil
Structure of P450Blt from Micromonospora sp. MW-13 in Complex with Biarylitide
分子名称: 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, ACETATE ION, Cytochrome P450-SU1, ...
著者Hansen, M.H, Cryle, M.J.
登録日2023-09-06
公開日2024-01-10
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural Insights into a Side Chain Cross-Linking Biarylitide P450 from RiPP Biosynthesis
Acs Catalysis, 2024
4Z0P
DownloadVisualize
BU of 4z0p by Molmil
Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase SMc02828 (SmGhrA) from Sinorhizobium meliloti in complex with NADPH and oxalate
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
著者Sroka, P, Gasiorowska, O.A, Handing, K.B, Shabalin, I.G, Porebski, P.J, Hillerich, B.S, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.
Biochemistry, 57, 2018
4ZNZ
DownloadVisualize
BU of 4znz by Molmil
Crystal structure of Escherichia coli carbonic anhydrase (YadF) in complex with Zn - artifact of purification
分子名称: Carbonic anhydrase, ZINC ION
著者Gasiorowska, O.A, Niedzialkowska, E, Porebski, P.J, Handing, K.B, Shabalin, I.G, Cymborowski, M.T, Minor, W.
登録日2015-05-05
公開日2015-05-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Protein purification and crystallization artifacts: The tale usually not told.
Protein Sci., 25, 2016
4Z8Z
DownloadVisualize
BU of 4z8z by Molmil
Crystal structure of the hypothetical protein from Ruminiclostridium thermocellum ATCC 27405
分子名称: Uncharacterized protein
著者Filippova, E.V, Wawrzak, Z, Kiryukhina, O, Endres, M, Joachimiak, J, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2015-04-09
公開日2015-05-06
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of the hypothetical protein from Ruminiclostridium thermocellum ATCC 27405
To Be Published
2FVT
DownloadVisualize
BU of 2fvt by Molmil
NMR Structure of the Rpa2829 protein from Rhodopseudomonas palustris: Northeast Structural Genomics Target RpR43
分子名称: conserved hypothetical protein
著者Cort, J.R, Ho, C.K, Cunningham, K, Ma, L.C, Conover, K, Xiao, R, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2006-01-31
公開日2006-02-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of the Rpa2829 protein from Rhodopseudomonas palustris
To be Published
5BP7
DownloadVisualize
BU of 5bp7 by Molmil
Crystal structure of SAM-dependent methyltransferase from Geobacter sulfurreducens in complex with S-Adenosyl-L-homocysteine
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
著者Kutner, J, Shabalin, I.G, Mason, D.V, Handing, K.B, Gasiorowska, O.A, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-05-27
公開日2015-06-10
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of SAM-dependent methyltransferase from Geobacter sulfurreducens in complex with S-Adenosyl-L-homocysteine
to be published
5BP9
DownloadVisualize
BU of 5bp9 by Molmil
Crystal structure of SAM-dependent methyltransferase from Bacteroides fragilis in complex with S-Adenosyl-L-homocysteine
分子名称: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Putative methyltransferase protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Cymborowski, M.T, Mason, D.V, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-05-27
公開日2015-06-10
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of SAM-dependent methyltransferase fromBacteroides fragilis in complex with S-Adenosyl-L-homocysteine
to be published
5TBE
DownloadVisualize
BU of 5tbe by Molmil
Human p38alpha MAP Kinase in Complex with Dibenzosuberone Compound 2
分子名称: Mitogen-activated protein kinase 14, ~{N}-[2,4-bis(fluoranyl)-5-[[9-(2-morpholin-4-ylethylcarbamoyl)-11-oxidanylidene-5,6-dihydrodibenzo[1,2-~{d}:1',2'-~{f}][7]annulen-3-yl]amino]phenyl]thiophene-2-carboxamide
著者Buehrmann, M, Rauh, D.
登録日2016-09-12
公開日2017-04-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Optimized Target Residence Time: Type I1/2 Inhibitors for p38 alpha MAP Kinase with Improved Binding Kinetics through Direct Interaction with the R-Spine.
Angew. Chem. Int. Ed. Engl., 56, 2017
5C5I
DownloadVisualize
BU of 5c5i by Molmil
Crystal structure of NADP-dependent dehydrogenase from Rhodobacter sphaeroides
分子名称: NADP-dependent dehydrogenase
著者Kowiel, M, Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Porebski, P.J, Cymborowski, M, Al Obaidi, N.F, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-06-19
公開日2015-07-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of NADP-dependent dehydrogenase from Rhodobacter sphaeroides
to be published
5XYX
DownloadVisualize
BU of 5xyx by Molmil
The structure of p38 alpha in complex with a triazol inhibitor
分子名称: Mitogen-activated protein kinase 14, N-(2-chloro-6-fluorobenzyl)-5-(furan-2-yl)-2H-1,2,4-triazol-3-amine
著者Wang, Y.L, Sun, Y.Z, Cao, R, Liu, D, Li, L, Qi, X.B, Huang, N.
登録日2017-07-11
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献In Silico Identification of a Novel Hinge-Binding Scaffold for Kinase Inhibitor Discovery.
J. Med. Chem., 60, 2017
5C7H
DownloadVisualize
BU of 5c7h by Molmil
Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021 in complex with NADPH
分子名称: Aldo-keto reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Seidel, R, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-06-24
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021 in complex with NADPH
to be published
5BXI
DownloadVisualize
BU of 5bxi by Molmil
1.7 Angstrom Resolution Crystal Structure of Putative Nucleoside Diphosphate Kinase from Toxoplasma gondii with Tyrosine of Tag Bound to Active Site
分子名称: BICARBONATE ION, DI(HYDROXYETHYL)ETHER, Nucleoside diphosphate kinase
著者Minasov, G, Ruan, J, Ngo, H, Shuvalova, L, Dubrovska, I, Flores, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-06-09
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon