Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7K0X
DownloadVisualize
BU of 7k0x by Molmil
Marsupial T cell receptor Spl_145
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, T cell receptor gamma chain, T cell receptor mu chain, ...
著者Wegrecki, M, Kannan Sivaraman, K, Le Nours, J, Rossjohn, J.
登録日2020-09-06
公開日2021-03-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The molecular assembly of the marsupial gamma mu T cell receptor defines a third T cell lineage.
Science, 371, 2021
7JWP
DownloadVisualize
BU of 7jwp by Molmil
Fab CJ11 in complex IL-18 peptide liberated by Caspase cleavage
分子名称: Fab CJ11 Heavy chain, Fab CJ11 Light chain, IL-18 peptide
著者Payandeh, J, Ho, H.
登録日2020-08-26
公開日2021-03-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Discovery of a caspase cleavage motif antibody reveals insights into noncanonical inflammasome function.
Proc.Natl.Acad.Sci.USA, 118, 2021
6GBP
DownloadVisualize
BU of 6gbp by Molmil
Crystal Structure of the oligomerization domain of VP35 from Ebola virus, mercury derivative
分子名称: MERCURY (II) ION, Polymerase cofactor VP35
著者Zinzula, L, Nagy, I, Orsini, M, Weyher-Stingl, E, Baumeister, W, Bracher, A.
登録日2018-04-16
公開日2018-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structures of Ebola and Reston Virus VP35 Oligomerization Domains and Comparative Biophysical Characterization in All Ebolavirus Species.
Structure, 27, 2019
6FZ3
DownloadVisualize
BU of 6fz3 by Molmil
Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and inhibitor bound
分子名称: 2,6-bis(chloranyl)-4-[2-(4-methylpiperazin-1-yl)pyridin-4-yl]-~{N}-(1,3,5-trimethylpyrazol-4-yl)benzenesulfonamide, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
著者Kersten, F.C, Brenk, R.
登録日2018-03-13
公開日2019-03-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 63, 2020
6GEI
DownloadVisualize
BU of 6gei by Molmil
TEAD4 (216-434);E263A+Y429F COMPLEXED WITH YAP PEPTIDE (60- 100);S94A AND MYRISTOATE (COVALENTLY BOUND TO LYS344, NOT CYS367!) AT 1.65A (P41212 CRYSTAL FORM); MYRISTOYLATION WAS DONE BY ADDING MYR-COA
分子名称: MYRISTIC ACID, PHOSPHATE ION, Transcriptional coactivator YAP1, ...
著者Kallen, J.
登録日2018-04-26
公開日2018-09-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Adaptation of the bound intrinsically disordered protein YAP to mutations at the YAP:TEAD interface.
Protein Sci., 27, 2018
6FNR
DownloadVisualize
BU of 6fnr by Molmil
Ergothioneine-biosynthetic methyltransferase EgtD in complex with chlorohistidine
分子名称: (2~{S})-2-chloranyl-3-(1~{H}-imidazol-5-yl)propanoic acid, GLYCEROL, Histidine N-alpha-methyltransferase, ...
著者Vit, A, Blankenfeldt, W, Seebeck, F.P.
登録日2018-02-05
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Inhibition and Regulation of the Ergothioneine Biosynthetic Methyltransferase EgtD.
ACS Chem. Biol., 13, 2018
6GBR
DownloadVisualize
BU of 6gbr by Molmil
Crystal Structure of the oligomerization domain of VP35 from Reston virus, mercury derivative
分子名称: MERCURIBENZOIC ACID, Polymerase cofactor VP35
著者Zinzula, L, Nagy, I, Orsini, M, Weyher-Stingl, E, Baumeister, W, Bracher, A.
登録日2018-04-16
公開日2018-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structures of Ebola and Reston Virus VP35 Oligomerization Domains and Comparative Biophysical Characterization in All Ebolavirus Species.
Structure, 27, 2019
6FU6
DownloadVisualize
BU of 6fu6 by Molmil
Phosphotriesterase PTE_C23_2
分子名称: FORMIC ACID, POLYACRYLIC ACID, Parathion hydrolase, ...
著者Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J.
登録日2018-02-26
公開日2019-03-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Phosphotriesterase PTE_A53_4
To Be Published
6G7I
DownloadVisualize
BU of 6g7i by Molmil
Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 49-406 fs state structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, ...
著者Nogly, P, Weinert, T, James, D, Cabajo, S, Ozerov, D, Furrer, A, Gashi, D, Borin, V, Skopintsev, P, Jaeger, K, Nass, K, Bath, P, Bosman, R, Koglin, J, Seaberg, M, Lane, T, Kekilli, D, Bruenle, S, Tanaka, T, Wu, W, Milne, C, White, T, Barty, A, Weierstall, U, Panneels, V, Nango, E, Iwata, S, Hunter, M, Schapiro, I, Schertler, G, Neutze, R, Standfuss, J.
登録日2018-04-06
公開日2018-06-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.
Science, 361, 2018
6G7N
DownloadVisualize
BU of 6g7n by Molmil
Trichodesmium Tery_3377 (IdiA) (FutA) with iron and alanine ligand.
分子名称: D-ALANINE, D-GLUTAMIC ACID, Extracellular solute-binding protein, ...
著者Machelett, M.M, Tews, I.
登録日2018-04-06
公開日2018-09-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum.
J. Biol. Chem., 293, 2018
6GBL
DownloadVisualize
BU of 6gbl by Molmil
Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions
分子名称: 1,2-ETHANEDIOL, CACODYLATE ION, FORMIC ACID, ...
著者Khersonsky, O, Lipsh, R, Avizemer, Z, Goldsmith, M, Ashani, Y, Leader, H, Dym, O, Rogotner, S, Trudeau, D, Tawfik, D.S, Fleishman, S.J.
登録日2018-04-15
公開日2018-10-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Automated Design of Efficient and Functionally Diverse Enzyme Repertoires.
Mol. Cell, 72, 2018
6GEG
DownloadVisualize
BU of 6geg by Molmil
TEAD4 (216-434);Y429F COMPLEXED WITH YAP PEPTIDE (60-100); S94A AND MYRISTOATE (COVALENTLY BOUND) AT 2.23A (P41212 CRYSTAL FORM); MYRISTOYLATION WAS DONE BY ADDING MYR-COA
分子名称: MYRISTIC ACID, Transcriptional coactivator YAP1, Transcriptional enhancer factor TEF-3
著者Kallen, J.
登録日2018-04-26
公開日2018-09-19
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Adaptation of the bound intrinsically disordered protein YAP to mutations at the YAP:TEAD interface.
Protein Sci., 27, 2018
6FN6
DownloadVisualize
BU of 6fn6 by Molmil
Modifying region (DH-ER-KR) of an insect fatty acid synthase (FAS)
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, Fatty acid synthase 1, ...
著者Benning, F.M.C, Bukhari, H.S.T, Jakob, R.P, Maier, T.
登録日2018-02-02
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Modifying region (DH-ER-KR) of an insect fatty acid synthase (FAS)
To Be Published
6G2G
DownloadVisualize
BU of 6g2g by Molmil
Fe-S assembly Cfd1
分子名称: Cytosolic Fe-S cluster assembly factor CFD1, IRON/SULFUR CLUSTER, SULFATE ION
著者Jeoung, J.H, Dobbek, H.
登録日2018-03-23
公開日2019-01-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Function and crystal structure of the dimeric P-loop ATPase CFD1 coordinating an exposed [4Fe-4S] cluster for transfer to apoproteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8IAS
DownloadVisualize
BU of 8ias by Molmil
Crystal structure of Streptococcus pneumoniae pyruvate kinase
分子名称: CITRIC ACID, GLYCEROL, Pyruvate kinase
著者Nakashima, R, Taguchi, A.
登録日2023-02-09
公開日2023-06-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional and structural characterization of Streptococcus pneumoniae pyruvate kinase involved in fosfomycin resistance.
J.Biol.Chem., 299, 2023
8IAT
DownloadVisualize
BU of 8iat by Molmil
Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with oxalate
分子名称: GLYCEROL, MAGNESIUM ION, OXALATE ION, ...
著者Nakashima, R, Taguchi, A.
登録日2023-02-09
公開日2023-06-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Functional and structural characterization of Streptococcus pneumoniae pyruvate kinase involved in fosfomycin resistance.
J.Biol.Chem., 299, 2023
6FRL
DownloadVisualize
BU of 6frl by Molmil
BrvH, a flavin-dependent halogenase from Brevundimonas sp. BAL3
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Widmann, C, Neubauer, P.R, Sewald, N, Niemann, H.H.
登録日2018-02-16
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A flavin-dependent halogenase from metagenomic analysis prefers bromination over chlorination.
PLoS ONE, 13, 2018
8IAW
DownloadVisualize
BU of 8iaw by Molmil
Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with phosphoenolpyruvate
分子名称: MAGNESIUM ION, PHOSPHOENOLPYRUVATE, Pyruvate kinase, ...
著者Nakashima, R, Taguchi, A.
登録日2023-02-09
公開日2023-06-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Functional and structural characterization of Streptococcus pneumoniae pyruvate kinase involved in fosfomycin resistance.
J.Biol.Chem., 299, 2023
8IAV
DownloadVisualize
BU of 8iav by Molmil
Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with fructose 1,6-bisphosphate
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, Pyruvate kinase
著者Nakashima, R, Taguchi, A.
登録日2023-02-09
公開日2023-06-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Functional and structural characterization of Streptococcus pneumoniae pyruvate kinase involved in fosfomycin resistance.
J.Biol.Chem., 299, 2023
6FSJ
DownloadVisualize
BU of 6fsj by Molmil
Crystal structure of TCE-treated Lysozyme
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Lysozyme C
著者Pichlo, C, Baumann, U.
登録日2018-02-19
公開日2018-05-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6G2V
DownloadVisualize
BU of 6g2v by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
著者Stach, L, Morgan, R.M.L, Freemont, P.S.
登録日2018-03-23
公開日2019-04-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
6FVN
DownloadVisualize
BU of 6fvn by Molmil
DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide
分子名称: Beta sliding clamp, P7 peptide
著者Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D.
登録日2018-03-04
公開日2019-04-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.142 Å)
主引用文献Peptide Interactions on Bacterial Sliding Clamps.
Acs Infect Dis., 2019
6FZP
DownloadVisualize
BU of 6fzp by Molmil
PPAR gamma complex.
分子名称: (2~{S})-3-[4-[2-[methyl(pyridin-2-yl)amino]ethoxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoic acid, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
著者Rochel, N, Beji, S.
登録日2018-03-15
公開日2019-02-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Recurrent activating mutations of PPAR gamma associated with luminal bladder tumors.
Nat Commun, 10, 2019
7JZI
DownloadVisualize
BU of 7jzi by Molmil
Crystal structure of LAIR1 ectodomain (from MGD21) in complex with Plasmodium RIFIN (PF3D7_1040300) V2 domain
分子名称: LAIR1 ectodomain from antibody MGD21, PLATINUM (II) ION, Rifin
著者Xu, K, Kwong, P.D.
登録日2020-09-02
公開日2021-05-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.707 Å)
主引用文献Structural basis of LAIR1 targeting by polymorphic Plasmodium RIFINs.
Nat Commun, 12, 2021
7K0V
DownloadVisualize
BU of 7k0v by Molmil
Crystal structure of bRaf in complex with inhibitor GNE-0749
分子名称: CHLORIDE ION, N-(3,3-dimethylbutyl)-N'-{2-fluoro-5-[(5-fluoro-3-methyl-4-oxo-3,4-dihydroquinazolin-6-yl)amino]-4-methylphenyl}urea, Non-specific serine/threonine protein kinase
著者Yin, J, Eigenbrot, C.E, Wang, W.
登録日2020-09-06
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Targeting KRAS Mutant Cancers via Combination Treatment: Discovery of a 5-Fluoro-4-(3 H )-quinazolinone Aryl Urea pan-RAF Kinase Inhibitor.
J.Med.Chem., 64, 2021

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon