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6V3M
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Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (IspF) Burkholderia pseudomallei in compomplex with ligand HGN-0961 (BSI110840)
分子名称: 1,2-ETHANEDIOL, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, 5-{[(propan-2-yl)carbamoyl]amino}-1,3,4-thiadiazole-2-sulfonamide, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-11-26
公開日2020-12-09
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Analysis of Burkholderia pseudomallei IspF in complex with sulfapyridine, sulfamonomethoxine, ethoxzolamide and acetazolamide.
Acta Crystallogr.,Sect.F, 81, 2025
5MNO
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BU of 5mno by Molmil
Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 295 K)
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5WKO
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BU of 5wko by Molmil
Crystal structure of antibody 27F3 recognizing the HA from A/California/04/2009 (H1N1) influenza virus
分子名称: Antibody 27F3 heavy chain, Antibody 27F3 light chain, Hemagglutinin
著者Wilson, I.A, Lang, S, Zhu, X.
登録日2017-07-25
公開日2017-10-25
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.492 Å)
主引用文献Antibody 27F3 Broadly Targets Influenza A Group 1 and 2 Hemagglutinins through a Further Variation in VH1-69 Antibody Orientation on the HA Stem.
Cell Rep, 20, 2017
8UVW
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BU of 8uvw by Molmil
Crystal structure of RAD51-BRCA2 Cter complex
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Longo, M.A, Perera, R, Tsai, C.-L, Tainer, J.A.
登録日2023-11-05
公開日2024-11-06
最終更新日2025-10-01
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献BRCA2 C-terminal clamp restructures RAD51 dimers to bind B-DNA for replication fork stability.
Mol.Cell, 85, 2025
6PFF
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BU of 6pff by Molmil
Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)-4-cyanobenzoic acid.
分子名称: 2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)-4-cyanobenzoic acid, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
著者Czyzyk, D.J, Valhondo, M, Jorgensen, W.L, Anderson, K.S.
登録日2019-06-21
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.982 Å)
主引用文献Structure activity relationship towards design of cryptosporidium specific thymidylate synthase inhibitors.
Eur.J.Med.Chem., 183, 2019
8J2V
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BU of 8j2v by Molmil
Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin
分子名称: 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one, GLYCEROL, Glycosyltransferase
著者Arold, S.T, Hameed, U.F.S.
登録日2023-04-15
公開日2024-04-17
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献beta-Carotene alleviates substrate inhibition caused by asymmetric cooperativity.
Nat Commun, 16, 2025
6V6Z
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BU of 6v6z by Molmil
Crystal structure of N-[(4-methoxyphenyl)sulfonyl]-N-(4-{[(4-methoxyphenyl)sulfonyl]amino}naphthalen-1-yl)glycine bound to human Keap1 Kelch domain
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DITHIANE DIOL, FORMIC ACID, ...
著者Lazzara, P.R, David, B.P, Ankireddy, A, Richardson, B.G, Dye, K, Ratia, K.M, Reddy, S.P, Moore, T.W.
登録日2019-12-06
公開日2020-04-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Synthesis and Evaluation of Noncovalent Naphthalene-Based KEAP1-NRF2 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
8YSV
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BU of 8ysv by Molmil
Crystal structure of beta - glucosidase 6PG from Enterococcus faecalis
分子名称: 1,2-ETHANEDIOL, 6-phospho-beta-glucosidase, ETHANOL, ...
著者Wang, W.Y, Li, Y.J, Liu, Z.Y, Han, X.D.
登録日2024-03-23
公開日2024-10-02
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structure of beta - glucosidase 6PG from Enterococcus faecalis
To Be Published
6NCZ
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BU of 6ncz by Molmil
Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans bound to phenyl-thio-beta-D-glucuronide
分子名称: Beta-glucuronidase, GLYCEROL, phenyl 1-thio-beta-D-glucopyranosiduronic acid
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2018-12-12
公開日2019-02-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
7OMS
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BU of 7oms by Molmil
Bs164 in complex with mannocyclophellitol aziridine
分子名称: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者McGregor, N, Beenakker, T, Kuo, C.L, Wong, C.S, Offren, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H, Davies, G.J.
登録日2021-05-24
公開日2022-02-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases.
Org.Biomol.Chem., 20, 2022
8JCN
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BU of 8jcn by Molmil
The crystal structure of SARS-CoV-2 main protease in complex with Compound 58
分子名称: 1-[3-(diphenoxyphosphorylamino)phenyl]ethanone, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Zhao, Y, Zhu, Y, Rao, Z.
登録日2023-05-11
公開日2024-05-15
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献De novo design of SARS-CoV-2 main protease inhibitors with characteristic binding modes.
Structure, 32, 2024
6GCJ
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BU of 6gcj by Molmil
Solution structure of the RodA hydrophobin from Aspergillus fumigatus
分子名称: Hydrophobin
著者Pille, A, Kwan, A, Aimanianda, V, Latge, J.-P, Sunde, M, Guijarro, J.I.
登録日2018-04-18
公開日2019-03-27
最終更新日2024-11-13
実験手法SOLUTION NMR
主引用文献Assembly and disassembly of Aspergillus fumigatus conidial rodlets
Cell Surf, 2019
8ENE
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BU of 8ene by Molmil
Aldehyde dehydrogenase 1 family member A1 from human liver
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Retinal dehydrogenase 1
著者Zhang, Z.
登録日2022-09-29
公開日2023-05-03
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献High-resolution structural-omics of human liver enzymes.
Cell Rep, 42, 2023
9IWY
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BU of 9iwy by Molmil
Crystal structure of the mouse RIP3 kinase domain in complexed with LK01003
分子名称: 2-cyclopentyl-~{N}-(6-propan-2-ylsulfonylquinolin-4-yl)-1,3-benzothiazol-5-amine, Receptor-interacting serine/threonine-protein kinase 3
著者Xie, H, Su, H.X, Li, M.J, Xu, Y.C.
登録日2024-07-26
公開日2025-05-07
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structure-based design of potent and selective inhibitors targeting RIPK3 for eliminating on-target toxicity in vitro.
Nat Commun, 16, 2025
8QWX
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BU of 8qwx by Molmil
Ligninolytic manganese peroxidase Ape-MnP1 from Agaricales mushrooms
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Santillana, E, Romero, A.
登録日2023-10-20
公開日2024-06-26
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-function characterization of two enzymes from novel subfamilies of manganese peroxidases secreted by the lignocellulose-degrading Agaricales fungi Agrocybe pediades and Cyathus striatus.
Biotechnol Biofuels Bioprod, 17, 2024
8QX0
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BU of 8qx0 by Molmil
Ligninolytic manganese peroxidase Ape-MnP1 from Agaricales mushrooms in complex with a manganese ion
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Santillana, E, Romero, A.
登録日2023-10-20
公開日2024-06-26
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.247 Å)
主引用文献Structure-function characterization of two enzymes from novel subfamilies of manganese peroxidases secreted by the lignocellulose-degrading Agaricales fungi Agrocybe pediades and Cyathus striatus.
Biotechnol Biofuels Bioprod, 17, 2024
6GFI
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BU of 6gfi by Molmil
Structure of Human Mesotrypsin in complex with APPI variant T11V/M17R/I18F/F34V
分子名称: 1,2-ETHANEDIOL, Amyloid-beta A4 protein, PRSS3 protein
著者Shahar, A, Cohen, I, Radisky, E, Papo, N, Naftaly, S.
登録日2018-04-30
公開日2018-09-12
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mapping protein selectivity landscapes using multi-target selective screening and next-generation sequencing of combinatorial libraries.
Nat Commun, 9, 2018
5MLH
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BU of 5mlh by Molmil
Plantago Major multifunctional oxidoreductase in complex with 8-oxogeranial and NADP+
分子名称: (2E,6E)-2,6-dimethylocta-2,6-dienedial, CALCIUM ION, GLYCEROL, ...
著者Fellows, R, Russo, C.M, Lee, S.G, Jez, J.M, Chisholm, J.D, Zubieta, C, Nanao, M.
登録日2016-12-06
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily.
Sci Rep, 8, 2018
8VNQ
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BU of 8vnq by Molmil
Homing endonuclease H98A I-PpoI-DNA complex at pH6.0 (K+ MES) with 1 mM Mn2+ for 1800s
分子名称: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ...
著者Chang, C, Gao, Y.
登録日2024-01-13
公開日2024-07-10
最終更新日2025-01-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Observing one-divalent-metal-ion-dependent and histidine-promoted His-Me family I-PpoI nuclease catalysis in crystallo.
Elife, 13, 2024
8VNR
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BU of 8vnr by Molmil
Homing endonuclease H98A I-PpoI-DNA complex at pH6.0 (K+ MES) with 1 mM Mn2+ for 600s and then 100 mM imidazole for 15 hrs
分子名称: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ...
著者Chang, C, Gao, Y.
登録日2024-01-13
公開日2024-07-10
最終更新日2025-01-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Observing one-divalent-metal-ion-dependent and histidine-promoted His-Me family I-PpoI nuclease catalysis in crystallo.
Elife, 13, 2024
6NCO
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BU of 6nco by Molmil
Fragment-based Discovery of an apoE4 Stabilizer
分子名称: 1-[5-chloro-4'-(2-hydroxypropan-2-yl)[1,1'-biphenyl]-3-yl]cyclobutane-1-carboximidamide, Apolipoprotein E
著者Jakob, C.G, Qiu, W.
登録日2018-12-11
公開日2019-04-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.707 Å)
主引用文献Fragment-Based Discovery of an Apolipoprotein E4 (apoE4) Stabilizer.
J.Med.Chem., 62, 2019
8VHQ
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Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and ATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Funk, M.A, Zimanyi, C.M, Drennan, C.L.
登録日2024-01-02
公開日2024-09-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 63, 2024
8VHR
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BU of 8vhr by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and GTP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Funk, M.A, Zimanyi, C.M, Drennan, C.L.
登録日2024-01-02
公開日2024-09-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 63, 2024
5MNN
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BU of 5mnn by Molmil
Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 100 K)
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (0.859 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
8W14
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Rhodanese-like domain from Acinetobacter baumannii 118362
分子名称: GLYCEROL, Rhodanese, SULFATE ION
著者Benisch, R, Giessen, T.W.
登録日2024-02-15
公開日2024-09-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and biochemical characterization of an encapsulin-associated rhodanese from Acinetobacter baumannii.
Protein Sci., 33, 2024

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