PDB: 819 件ウェブページステータス検索Chemie searchBIRD

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4FOJ	1.55 A Crystal Structure of Xanthomonas citri FimX EAL domain in complex with c-diGMP 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX 著者 Farah, C.S, Guzzo, C.R. 登録日 2012-06-20 公開日 2013-03-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis. J.Mol.Biol., 425, 2013
2HTJ	NMR structure of E.coli PapI 分子名称: P fimbrial regulatory protein KS71A 著者 Kawamura, T, Zhou, H, Le, L.U.K, Dahlquist, F.W. 登録日 2006-07-25 公開日 2007-01-30 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Escherichia coli PapI, a Key Regulator of the Pap Pili Phase Variation. J.Mol.Biol., 365, 2007
2GSZ	Structure of A. aeolicus PilT with 6 monomers per asymmetric unit 分子名称: ADENOSINE-5'-DIPHOSPHATE, SULFATE ION, twitching motility protein PilT 著者 Forest, K.T, Satyshur, K.A. 登録日 2006-04-27 公開日 2007-03-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Crystal structures of the pilus retraction motor PilT suggest large domain movements and subunit cooperation drive motility. Structure, 15, 2007
3ZCJ	Crystal structure of Helicobacter pylori T4SS protein CagL in a tetragonal crystal form with a helical RGD-motif (6 Mol per ASU) 分子名称: CAGL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Barden, S, Niemann, H.H. 登録日 2012-11-20 公開日 2013-10-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 A Helical Rgd Motif Promoting Cell Adhesion: Crystal Structures of the Helicobacter Pylori Type Iv Secretion System Pilus Protein Cagl Structure, 21, 2013
3ZCI	Crystal structure of Helicobacter pylori T4SS protein CagL in a cubic crystal form with a distorted helical conformation of the RGD-motif 分子名称: 1,4-DIETHYLENE DIOXIDE, CAG PATHOGENICITY ISLAND PROTEIN (CAG18), CHLORIDE ION, ... 著者 Barden, S, Niemann, H.H. 登録日 2012-11-20 公開日 2013-10-09 最終更新日 2019-09-25 実験手法 X-RAY DIFFRACTION (2.201 Å) 主引用文献 A Helical Rgd Motif Promoting Cell Adhesion: Crystal Structures of the Helicobacter Pylori Type Iv Secretion System Pilus Protein Cagl Structure, 21, 2013
5TFY	The archaeal flagellum of Methanospirillum hungatei strain JF1. 分子名称: Flagellin 著者 Poweleit, N, Peng, G, Gunsalus, R.P, Zhou, Z.H. 登録日 2016-09-27 公開日 2016-12-07 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 CryoEM structure of the Methanospirillum hungatei archaellum reveals structural features distinct from the bacterial flagellum and type IV pili. Nat Microbiol, 2, 2016
3CNR	Crystal Structure of PilZ (XAC1133) from Xanthomonas axonopodis pv citri 分子名称: Type IV fimbriae assembly protein 著者 Guzzo, C.R, Farah, C.S. 登録日 2008-03-26 公開日 2009-03-31 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 PILZ protein structure and interactions with PILB and the FIMX EAL domain: implications for control of type IV pilus biogenesis. J.Mol.Biol., 393, 2009
4CII	Crystal structure of N-terminally truncated Helicobacter pylori T4SS Protein CagL as domain swapped dimer 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CAG PATHOGENICITY ISLAND PROTEIN (CAG18) 著者 Barden, S, Schomburg, B, Niemann, H.H. 登録日 2013-12-09 公開日 2014-02-19 最終更新日 2019-09-25 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure of a Three-Dimensional Domain-Swapped Dimer of the Helicobacter Pylori Type Iv Secretion System Pilus Protein Cagl. Acta Crystallogr.,Sect.D, 70, 2014
5XCC	X-ray structure of Clostridium perfringens pili protein CppA 分子名称: Probable surface protein 著者 Kamitori, S, Tamai, E. 登録日 2017-03-22 公開日 2018-02-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change. Acta Crystallogr D Struct Biol, 75, 2019
5XCB	X-ray structure of domains D1 and D2 of Clostridium perfringens pili protein CppA 分子名称: Probable surface protein 著者 Kamitori, S, Tamai, E. 登録日 2017-03-22 公開日 2018-02-28 最終更新日 2019-08-14 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change. Acta Crystallogr D Struct Biol, 75, 2019
7QYI	Solution structure of the DNA-binding minor pilin FimT from Legionella pneumophila 分子名称: Pilus assembly protein 著者 Braus, S.A.G, Hospenthal, M.K, Gossert, A.D. 登録日 2022-01-28 公開日 2022-03-02 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 The molecular basis of FimT-mediated DNA uptake during bacterial natural transformation. Nat Commun, 13, 2022
2XG4	E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 2c 分子名称: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, COBALT (II) ION, ... 著者 Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G. 登録日 2010-05-30 公開日 2010-07-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity. J.Med.Chem., 53, 2010
2XG5	E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 5d 分子名称: (2R)-2-[5-CYCLOPROPYL-6-(HYDROXYSULFANYL)-4-(NAPHTHALEN-1-YLMETHYL)-2-OXOPYRIDIN-1(2H)-YL]-3-PHENYLPROPANOIC ACID, (2R,3R)-8-CYCLOPROPYL-7-(NAPHTHALEN-1-YLMETHYL)-5-OXO-2-PHENYL-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, ... 著者 Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G. 登録日 2010-05-30 公開日 2010-07-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity. J.Med.Chem., 53, 2010
4US7	Sulfur SAD Phased Structure of a Type IV Pilus Protein from Shewanella oneidensis 分子名称: PILD PROCESSED PROTEIN, SODIUM ION, SULFATE ION 著者 Gorgel, M, Boeggild, A, Ulstrup, J.J, Mueller, U, Weiss, M, Nissen, P, Boesen, T. 登録日 2014-07-03 公開日 2015-04-29 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 High-Resolution Structure of a Type Iv Pilin from the Metal- Reducing Bacterium Shewanella Oneidensis. Bmc Struct.Biol., 15, 2015
4J3O	Crystal structure of the FimD usher traversed by the pilus tip complex assembly composed of FimC:FimF:FimG:FimH 分子名称: Chaperone protein FimC, Outer membrane usher protein FimD, Protein FimF, ... 著者 Geibel, S, Waksman, G. 登録日 2013-02-06 公開日 2013-04-10 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structural and energetic basis of folded-protein transport by the FimD usher. Nature, 496, 2013
7CBS	Crystal structure of SpaB basal pilin from Lactobacillus rhamnosus GG 分子名称: CHLORIDE ION, LPXTG cell wall anchor domain-containing protein, MAGNESIUM ION 著者 Megta, A.K, Pratap, S, Kant, A, Krishnan, V. 登録日 2020-06-13 公開日 2020-12-30 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Crystal structure of the atypically adhesive SpaB basal pilus subunit: Mechanistic insights about its incorporation in lactobacillar SpaCBA pili. Curr Res Struct Biol, 2, 2020
6KMF	FimA type V pilus from P.gingivalis 分子名称: Major fimbrium subunit FimA type-1 著者 Shibata, S, Shoji, M, Matsunami, H, Matthews, M, Imada, K, Nakayama, K, Wolf, M. 登録日 2019-07-31 公開日 2020-04-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange. Nat Microbiol, 5, 2020
6AOX	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with TF antigen 分子名称: Fml fimbrial adhesin FmlD, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose 著者 Kalas, V, Hultgren, S.J. 登録日 2017-08-16 公開日 2018-02-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
6AS8	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside 分子名称: Fml fimbrial adhesin FmlD, ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside 著者 Kalas, V, Hultgren, S.J. 登録日 2017-08-23 公開日 2018-02-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
6ARN	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with o-methoxyphenyl beta-galactoside (OMPG) 分子名称: 2-methoxyphenyl beta-D-galactopyranoside, Putative Fml fimbrial adhesin FmlD, SULFATE ION 著者 Kalas, V, Hultgren, S.J. 登録日 2017-08-22 公開日 2018-02-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
6AOY	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with o-nitrophenyl beta-galactoside (ONPG) 分子名称: 2-nitrophenyl beta-D-galactopyranoside, Fml fimbrial adhesin FmlD, SULFATE ION 著者 Kalas, V, Hultgren, S.J. 登録日 2017-08-16 公開日 2018-02-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
2XTL	Structure of the major pilus backbone protein from Streptococcus Agalactiae 分子名称: CELL WALL SURFACE ANCHOR FAMILY PROTEIN, POTASSIUM ION 著者 Rinauda, D, Gourlay, L.J, Soriano, M, Grandi, G, Bolognesi, M. 登録日 2010-10-11 公開日 2011-07-06 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structure-Based Approach to Rationally Design a Chimeric Protein for an Effective Vaccine Against Group B Streptococcus Infections. Proc.Natl.Acad.Sci.USA, 108, 2011
4NCD	Crystal Structure of Class 5 Fimbriae Chaperone CfaA 分子名称: Gram-negative pili assembly chaperone, N-terminal domain protein 著者 Bao, R, Xia, D. 登録日 2013-10-24 公開日 2014-08-27 実験手法 X-RAY DIFFRACTION (2.037 Å) 主引用文献 Structure of CfaA Suggests a New Family of Chaperones Essential for Assembly of Class 5 Fimbriae. Plos Pathog., 10, 2014
2VQI	Structure of the P pilus usher (PapC) translocation pore 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE USHER PROTEIN PAPC 著者 Remaut, H, Tang, C, Henderson, N.S, Pinkner, J.S, Wang, T, Hultgren, S.J, Thanassi, D.G, Li, H, Waksman, G. 登録日 2008-03-16 公開日 2008-05-27 最終更新日 2019-01-16 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Fiber formation across the bacterial outer membrane by the chaperone/usher pathway. Cell, 133, 2008
8FK0	Asymmetric cryo-EM structure of a curved Saccharolobus solfataricus type IV pilus 分子名称: Pilin_N domain-containing protein 著者 Kreutzberger, M.A, Wang, F, Krupovic, M, Egelman, E.H. 登録日 2022-12-20 公開日 2023-06-28 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 The evolution of archaeal flagellar filaments. Proc.Natl.Acad.Sci.USA, 120, 2023

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