Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8BCI
DownloadVisualize
BU of 8bci by Molmil
Crystal structure of short-chain dehydrogenase PA3128 from Pseudomonas aeruginosa PAO1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Probable short-chain dehydrogenase
著者Popp, M.A, Vit, A, Blankenfeldt, W.
登録日2022-10-16
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structure of short-chain dehydrogenase PA3128 from Pseudomonas aeruginosa PAO1
To Be Published
8BAD
DownloadVisualize
BU of 8bad by Molmil
Tpp80Aa1
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Binary toxin A-like protein, CALCIUM ION, ...
著者Best, H.L, Williamson, L.J, Rizkallah, P.J, Berry, C, Lloyd-Evans, E.
登録日2022-10-11
公開日2022-12-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The Crystal Structure of Bacillus thuringiensis Tpp80Aa1 and Its Interaction with Galactose-Containing Glycolipids.
Toxins, 14, 2022
6TQG
DownloadVisualize
BU of 6tqg by Molmil
Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Glucose-1-phosphate thymidylyltransferase, ...
著者Alphey, M.S, Xiao, G, Westwood, J.N.
登録日2019-12-16
公開日2020-08-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Next generation Glucose-1-phosphate thymidylyltransferase (RmlA) inhibitors: An extended SAR study to direct future design.
Bioorg.Med.Chem., 50, 2021
8AUC
DownloadVisualize
BU of 8auc by Molmil
Structure of peptidoglycan hydrolase Cg1735 from Corynebacterium glutamicum, trigonal crystal form
分子名称: Cell wall-associated hydrolases (Invasion-associated proteins), TETRACHLOROPLATINATE(II)
著者Gaday, Q, Wehenkel, A.M, Alzari, P.M, Legrand, P.
登録日2022-08-25
公開日2023-01-18
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献FtsEX-independent control of RipA-mediated cell separation in Corynebacteriales.
Proc.Natl.Acad.Sci.USA, 119, 2022
8BDO
DownloadVisualize
BU of 8bdo by Molmil
VCB in complex with compound 21
分子名称: (2~{S},4~{R})-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-~{N}-[4-(4-methyl-1,3-thiazol-5-yl)phenoxy]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
登録日2022-10-19
公開日2023-02-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
8BEB
DownloadVisualize
BU of 8beb by Molmil
Ternary complex between VCB, BRD4-BD1 and PROTAC 49
分子名称: (2~{S},4~{R})-~{N}-[(1~{S})-3-[4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]butylamino]-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]-3-oxidanylidene-propyl]-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Bromodomain-containing protein 4, Elongin-B, ...
著者Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
登録日2022-10-21
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
8BDX
DownloadVisualize
BU of 8bdx by Molmil
Ternary complex between VCB, BRD4-BD2 and PROTAC 48
分子名称: (2S,4R)-N-[(1S)-1-(4-chlorophenyl)-3-[2-[2-[2-[2-[2-[(9S)-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8$l^{5},11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]ethoxy]ethoxy]ethoxy]ethylamino]-3-oxidanylidene-propyl]-1-[(2R)-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Bromodomain-containing protein 4, Elongin-B, ...
著者Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
登録日2022-10-20
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
8BDL
DownloadVisualize
BU of 8bdl by Molmil
VCB in complex with compound 27
分子名称: (2~{S},4~{R})-~{N}-[(1~{S})-1-[2-(2-methoxyethoxy)-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
登録日2022-10-19
公開日2023-02-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
8BDJ
DownloadVisualize
BU of 8bdj by Molmil
VCB in complex with compound 30
分子名称: (2~{S},4~{R})-~{N}-[(1~{S})-1-[4-chloranyl-2-(2-methoxyethoxy)phenyl]ethyl]-1-[(2~{R})-3-methyl-2-(3-methyl-1,2-oxazol-5-yl)butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Sorrell, F.J, Mueller, J.E, Lehmann, M, Wegener, A.
登録日2022-10-19
公開日2023-02-15
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Systematic Potency and Property Assessment of VHL Ligands and Implications on PROTAC Design.
Chemmedchem, 18, 2023
9K7D
DownloadVisualize
BU of 9k7d by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with Maltohexaose
分子名称: Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-10-23
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The crystal structure of GH57 family amylopullulanase reveals its dual binding pockets sharing the same catalytic dyad.
Commun Biol, 8, 2025
9KYQ
DownloadVisualize
BU of 9kyq by Molmil
GH57 family amylopullulanase from Aquifex aeolicus wild type co-crystallize with gama-cyclodextrin
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Zhu, Z.M, Wang, W.W, Yu, F, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S.
登録日2024-12-09
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9JLW
DownloadVisualize
BU of 9jlw by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant D352N in complex with maltoheptaose
分子名称: GLYCEROL, Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-09-19
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献High-Temperature Crystallization Method for the GH57 Family Hyperthermophilic Amylopullulanase from Aquifex aeolicus
Cryst.Growth Des., 24, 2024
9JLU
DownloadVisualize
BU of 9jlu by Molmil
GH57 family amylopullulanase from Aquifex aeolicus D352N mutant complex with beta-cyclodextrin
分子名称: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL, Glycoside hydrolase family 57 N-terminal domain-containing protein
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-09-19
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9JLR
DownloadVisualize
BU of 9jlr by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with maltopentaose
分子名称: Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-09-19
公開日2025-06-04
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献High-Temperature Crystallization Method for the GH57 Family Hyperthermophilic Amylopullulanase from Aquifex aeolicus
Cryst.Growth Des., 24, 2024
9JLS
DownloadVisualize
BU of 9jls by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus wild type in complex with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Glycoside hydrolase family 57 N-terminal domain-containing protein
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-09-19
公開日2025-06-04
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献High-Temperature Crystallization Method for the GH57 Family Hyperthermophilic Amylopullulanase from Aquifex aeolicus
Cryst.Growth Des., 24, 2024
7QVL
DownloadVisualize
BU of 7qvl by Molmil
OESTROGEN RECEPTOR LIGAND BINDING DOMAIN IN COMPLEX WITH COMPOUND 38
分子名称: (2~{R})-3-[(1~{R},3~{R})-1-[5-fluoranyl-2-[2-(3-fluoranylpropylamino)ethoxy]-3-methyl-pyridin-4-yl]-3-methyl-1,3,4,9-tetrahydropyrido[3,4-b]indol-2-yl]-2-methyl-propanoic acid, Estrogen receptor
著者Breed, J.
登録日2022-01-21
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of a Potent and Orally Bioavailable Zwitterionic Series of Selective Estrogen Receptor Degrader-Antagonists.
J.Med.Chem., 66, 2023
4V4Y
DownloadVisualize
BU of 4v4y by Molmil
Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Jenner, L, Yusupova, G, Rees, B, Moras, D, Yusupov, M.
登録日2006-06-27
公開日2014-07-09
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Structural basis for messenger RNA movement on the ribosome.
Nature, 444, 2006
9KYP
DownloadVisualize
BU of 9kyp by Molmil
GH57 family amylopullulanase from Aquifex aeolicus wild type complex with beta-cyclodextrin
分子名称: 1,2-ETHANEDIOL, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), DI(HYDROXYETHYL)ETHER, ...
著者Zhu, Z.M, Wang, W.W, Yu, F, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S.
登録日2024-12-09
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
7R1M
DownloadVisualize
BU of 7r1m by Molmil
Crystal structure of ExsFA, a Bacillus cereus spore exosporium protein
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Exosporium protein, ...
著者Brear, P, Schack, S, Christie, G.
登録日2022-02-03
公開日2023-02-15
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structure of ExsFA, a Bacillus cereus spore exosporium protein"
To Be Published
9JLV
DownloadVisualize
BU of 9jlv by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with alpha-cyclodextrin
分子名称: CITRATE ANION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL, ...
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-09-19
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9JLT
DownloadVisualize
BU of 9jlt by Molmil
GH57 family amylopullulanase D352N mutant from Aquifex aeolicus complex with alpha-cyclodextrin
分子名称: Cyclohexakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL, Glycoside hydrolase family 57 N-terminal domain-containing protein
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-09-19
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9K7C
DownloadVisualize
BU of 9k7c by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with maltopentaose
分子名称: GLYCEROL, Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
登録日2024-10-23
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The crystal structure of GH57 family amylopullulanase reveals its dual binding pockets sharing the same catalytic dyad.
Commun Biol, 8, 2025
9KYR
DownloadVisualize
BU of 9kyr by Molmil
GH57 family amylopullulanase from Aquifex aeolicus D352N mutant complex with gama-cyclodextrin
分子名称: 1,2-ETHANEDIOL, Cyclooctakis-(1-4)-(alpha-D-glucopyranose), DI(HYDROXYETHYL)ETHER, ...
著者Zhu, Z.M, Wang, W.W, Yu, F, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S.
登録日2024-12-09
公開日2025-06-04
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9JK4
DownloadVisualize
BU of 9jk4 by Molmil
putative E2P of TMEM94
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum magnesium-transporting P-type ATPase
著者Gong, D.S.
登録日2024-09-15
公開日2025-06-11
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Structural analysis of full-length human transmembrane protein 94 argues against its classification as a P-type Mg 2+ ATPase.
Cell Discov, 11, 2025
7R29
DownloadVisualize
BU of 7r29 by Molmil
Crystal structure of TaCel5A E133Q Y200F variant with covalently linked cellotriose
分子名称: EGI, GLYCEROL, SULFATE ION, ...
著者Dutoit, R.
登録日2022-02-04
公開日2023-02-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structure of TaCel5A E133Q Y200F variant with covalently linked cellotriose
To Be Published

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon