PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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1CQT	CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT 分子名称: DNA (5'-D(*AP*CP*CP*TP*TP*AP*TP*TP*TP*GP*CP*AP*TP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*AP*TP*GP*CP*AP*AP*AP*TP*AP*AP*GP*G)-3'), POU DOMAIN, ... 著者 Chasman, D.I, Cepek, K, Sharp, P.A, Pabo, C.O. 登録日 1999-08-11 公開日 1999-11-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structure of an OCA-B peptide bound to an Oct-1 POU domain/octamer DNA complex: specific recognition of a protein-DNA interface. Genes Dev., 13, 1999
4E2A	Crystal Structure of the Putative acetyltransferase from Streptococcus mutans 分子名称: Putative acetyltransferase 著者 Li, G.L, Nie, J.K, Li, L.F, Su, X.D. 登録日 2012-03-08 公開日 2013-03-13 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of the Putative acetyltransferase from Streptococcus mutans To be Published
1F89	Crystal structure of Saccharomyces cerevisiae Nit3, a member of branch 10 of the nitrilase superfamily 分子名称: 32.5 KDA PROTEIN YLR351C 著者 Kumaran, D, Eswaramoorthy, S, Studier, F.W, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2000-06-29 公開日 2001-10-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of a putative CN hydrolase from yeast Proteins, 52, 2003
4NTN	E.coli QueD, SeMet protein, 2A resolution 分子名称: 6-carboxy-5,6,7,8-tetrahydropterin synthase, FORMIC ACID, ZINC ION 著者 Bandarian, V, Roberts, S.A, Miles, Z.D. 登録日 2013-12-02 公開日 2014-07-16 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold Superfamily. J.Biol.Chem., 289, 2014
4NTK	QueD from E. coli 分子名称: 2-amino-6-[(1Z)-1,2-dihydroxyprop-1-en-1-yl]-7,8-dihydropteridin-4(3H)-one, 6-carboxy-5,6,7,8-tetrahydropterin synthase, ACETATE ION, ... 著者 Bandarian, V, Roberts, S.A, Miles, Z.D. 登録日 2013-12-02 公開日 2014-07-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold Superfamily. J.Biol.Chem., 289, 2014
4NTM	QueD soaked with sepiapterin (selenomethionine substituted protein) 分子名称: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 6-carboxy-5,6,7,8-tetrahydropterin synthase, ZINC ION 著者 Bandarian, V, Miles, Z.D, Roberts, S.A. 登録日 2013-12-02 公開日 2014-07-16 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold Superfamily. J.Biol.Chem., 289, 2014
3U4K	Crystal structure of the receptor binding domain of plasmid-born adhesin MrkD1P of Klebsiella pneumoniae 分子名称: Fimbria adhesin protein 著者 Rego, A.T, Waksman, G. 登録日 2011-10-09 公開日 2012-09-26 最終更新日 2013-07-24 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of the MrkD1P receptor binding domain of Klebsiella pneumoniae and identification of the human collagen V binding interface. Mol.Microbiol., 86, 2012
6KLW	Complex structure of Iota toxin enzymatic component (Ia) and binding component (Ib) pore with long stem 分子名称: CALCIUM ION, Iota toxin component Ia, Iota toxin component Ib 著者 Yoshida, T, Yamada, T, Kawamoto, A, Mitsuoka, K, Iwasaki, K, Tsuge, H. 登録日 2019-07-30 公開日 2020-01-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-EM structures reveal translocational unfolding in the clostridial binary iota toxin complex. Nat.Struct.Mol.Biol., 27, 2020
5CYP	GTPase domain of Septin 9 in complex with GTP-gamma-S 分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Septin-9 著者 Matos, S.S, Leonardo, D.A, Pereira, H.M, Horjales, E, Araujo, A.P.U, Garratt, R.C. 登録日 2015-07-30 公開日 2016-08-03 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.893 Å) 主引用文献 A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface Iucrj, 2020
6KLX	Pore structure of Iota toxin binding component (Ib) 分子名称: CALCIUM ION, Iota toxin component Ib 著者 Yoshida, T, Yamada, T, Kawamoto, A, Mitsuoka, K, Iwasaki, K, Tsuge, H. 登録日 2019-07-30 公開日 2020-01-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-EM structures reveal translocational unfolding in the clostridial binary iota toxin complex. Nat.Struct.Mol.Biol., 27, 2020
6DKU	Crystal structure of Myotis VP35 mutant of interferon inhibitory domain 分子名称: VP35 著者 Liu, H, Ginell, G.M, Keefe, L.J, Leung, D.W, Amarasinghe, G.K. 登録日 2018-05-30 公開日 2018-07-18 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Conservation of Structure and Immune Antagonist Functions of Filoviral VP35 Homologs Present in Microbat Genomes. Cell Rep, 24, 2018
5CYO	High resolution Septin 9 GTPase domain in complex with GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Septin-9 著者 Matos, S.S, Leonardo, D.A, Pereira, H.M, Horjales, E, Araujo, A.P.U, Garratt, R.C. 登録日 2015-07-30 公開日 2016-08-03 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.0354 Å) 主引用文献 A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface Iucrj, 2020
6KLO	Complex structure of Iota toxin enzymatic component (Ia) and binding component (Ib) pore with short stem 分子名称: CALCIUM ION, Iota toxin component Ia, Iota toxin component Ib 著者 Yoshida, T, Yamada, T, Kawamoto, A, Mitsuoka, K, Iwasaki, K, Tsuge, H. 登録日 2019-07-30 公開日 2020-01-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Cryo-EM structures reveal translocational unfolding in the clostridial binary iota toxin complex. Nat.Struct.Mol.Biol., 27, 2020
6KSD	Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis 分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase A, SULFATE ION 著者 Ramachandran, R, Shukla, A, Afsar, M. 登録日 2019-08-23 公開日 2020-08-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity. Acta Crystallogr D Struct Biol, 77, 2021
6KRH	Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis 分子名称: ADENOSINE MONOPHOSPHATE, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase A, ... 著者 Ramachandran, R, Shukla, A, Afsar, M. 登録日 2019-08-21 公開日 2020-08-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity. Acta Crystallogr D Struct Biol, 77, 2021
6KSC	Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis 分子名称: ADENOSINE MONOPHOSPHATE, DNA ligase A, SULFATE ION 著者 Ramachandran, R, Shukla, A, Afsar, M. 登録日 2019-08-23 公開日 2020-08-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity. Acta Crystallogr D Struct Biol, 77, 2021
3O40	Complex of a chimeric alpha/beta-peptide based on the gp41 CHR domain bound to gp41-5 分子名称: CHLORIDE ION, GLYCEROL, NONAETHYLENE GLYCOL, ... 著者 Horne, W.S, Johnson, L.M, Gellman, S.H. 登録日 2010-07-26 公開日 2011-07-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Broad Distribution of Energetically Important Contacts across an Extended Protein Interface. J.Am.Chem.Soc., 133, 2011
3O3Z	Complex of a chimeric alpha/beta-peptide based on the gp41 CHR domain bound to a gp41 NHR domain peptide 分子名称: Envelope glycoprotein gp160, GLYCEROL, chimeric alpha/beta peptide based on gp41 CHR domain sequence 著者 Horne, W.S, Johnson, L.M, Gellman, S.H. 登録日 2010-07-26 公開日 2011-07-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Broad Distribution of Energetically Important Contacts across an Extended Protein Interface. J.Am.Chem.Soc., 133, 2011
1JQ6	HUMAN CYTOMEGALOVIRUS PROTEASE DIMER-INTERFACE MUTANT, S225Y 分子名称: ASSEMBLIN 著者 Batra, R, Khayat, R, Tong, L. 登録日 2001-08-03 公開日 2001-09-12 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Molecular mechanism for dimerization to regulate the catalytic activity of human cytomegalovirus protease. Nat.Struct.Biol., 8, 2001
3O3X	Crystal structure of gp41-5, a single-chain 5-helix-bundle based on HIV gp41 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ISOPROPYL ALCOHOL, gp41-5 著者 Horne, W.S, Johnson, L.M, Gellman, S.H. 登録日 2010-07-26 公開日 2011-07-27 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Broad Distribution of Energetically Important Contacts across an Extended Protein Interface. J.Am.Chem.Soc., 133, 2011
4DFC	Core UvrA/TRCF complex 分子名称: Transcription-repair-coupling factor, UvrABC system protein A 著者 Deaconescu, A.M, Grigorieff, N. 登録日 2012-01-23 公開日 2012-05-02 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.803 Å) 主引用文献 Nucleotide excision repair (NER) machinery recruitment by the transcription-repair coupling factor involves unmasking of a conserved intramolecular interface. Proc.Natl.Acad.Sci.USA, 109, 2012
1NZ6	Crystal Structure of Auxilin J-Domain 分子名称: Auxilin 著者 Jiang, J, Taylor, A.B, Prasad, K, Ishikawa-Brush, Y, Hart, P.J, Lafer, E.M, Sousa, R. 登録日 2003-02-16 公開日 2003-04-22 最終更新日 2011-11-16 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure-function analysis of the auxilin J-domain reveals an extended Hsc70 interaction interface. Biochemistry, 42, 2003
7T6F	Structure of active Janus Kinase (JAK) dimer complexed with cytokine receptor intracellular domain 分子名称: ADENOSINE, ADENOSINE-5'-DIPHOSPHATE, Interferon lambda receptor 1, ... 著者 Glassman, C.R, Tsutsumi, N, Jude, K.M, Garcia, K.C. 登録日 2021-12-13 公開日 2022-03-16 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of a Janus kinase cytokine receptor complex reveals the basis for dimeric activation. Science, 376, 2022
3MI8	The structure of TL1A-DCR3 COMPLEX 分子名称: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 15, SECRETED FORM, Tumor necrosis factor receptor superfamily member 6B 著者 Zhan, C, Patskovsky, Y, Yan, Q, Li, Z, Ramagopal, U.A, Nathenson, S.G, Almo, S.C. 登録日 2010-04-09 公開日 2011-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.951 Å) 主引用文献 Decoy Strategies: The Structure of TL1A:DcR3 Complex. Structure, 19, 2011
3O43	Complex of an alpha/beta-peptide based on the gp41 CHR domain bound to gp41-5 分子名称: GLYCEROL, alpha/beta-peptide derived from gp41 CHR domain sequence, gp41-5 著者 Horne, W.S, Johnson, L.M, Gellman, S.H. 登録日 2010-07-26 公開日 2011-07-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Broad Distribution of Energetically Important Contacts across an Extended Protein Interface. J.Am.Chem.Soc., 133, 2011

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