PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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6E4T	Structure of AMPK bound to activator 分子名称: 1-O-{6-chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1H-indole-3-carbonyl}-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ... 著者 Calabrese, M.F, Kurumbail, R.G. 登録日 2018-07-18 公開日 2018-08-08 最終更新日 2018-09-05 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK). J. Med. Chem., 61, 2018
6E4U	Structure of AMPK bound to activator 分子名称: 1-O-{6-chloro-5-[6-(dimethylamino)-2-methoxypyridin-3-yl]-1H-indole-3-carbonyl}-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ... 著者 Calabrese, M.F, Kurumbail, R.G. 登録日 2018-07-18 公開日 2018-08-08 最終更新日 2018-09-05 実験手法 X-RAY DIFFRACTION (3.27 Å) 主引用文献 Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK). J. Med. Chem., 61, 2018
6E4W	Structure of AMPK bound to activator 分子名称: 1-O-(4,6-difluoro-5-{4-[(2S)-oxan-2-yl]phenyl}-1H-indole-3-carbonyl)-beta-D-glucopyranuronic acid, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ... 著者 Calabrese, M.F, Kurumbail, R.G. 登録日 2018-07-18 公開日 2018-08-08 最終更新日 2018-09-05 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Acyl Glucuronide Metabolites of 6-Chloro-5-[4-(1-hydroxycyclobutyl)phenyl]-1 H-indole-3-carboxylic Acid (PF-06409577) and Related Indole-3-carboxylic Acid Derivatives are Direct Activators of Adenosine Monophosphate-Activated Protein Kinase (AMPK). J. Med. Chem., 61, 2018
4GJU	5-Methylcytosine modified DNA oligomer 分子名称: 5-Methylcytosine modified DNA oligomer, MAGNESIUM ION 著者 Spingler, B, Renciuk, D, Vorlickova, M. 登録日 2012-08-10 公開日 2013-08-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.412 Å) 主引用文献 Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine. Nucleic Acids Res., 41, 2013
6EBN	Crystal structure of Psilocybe cubensis noncanonical aromatic amino acid decarboxylase 分子名称: FORMIC ACID, GLYCEROL, SODIUM ION, ... 著者 Torrens-Spence, M.P, Chun-Ting, L, Pluskal, T, Chung, Y.K, Weng, J.K. 登録日 2018-08-06 公開日 2018-12-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.9663111 Å) 主引用文献 Monoamine Biosynthesis via a Noncanonical Calcium-Activatable Aromatic Amino Acid Decarboxylase in Psilocybin Mushroom. ACS Chem. Biol., 13, 2018
4GLC	DNA dodecamer containing 5-hydroxymethyl-cytosine 分子名称: DNA (5'-D(*CP*GP*(5HC)P*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') 著者 Spingler, B, Renciuk, D, Vorlickova, M. 登録日 2012-08-14 公開日 2013-08-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.831 Å) 主引用文献 Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine. Nucleic Acids Res., 41, 2013
6F0Q	Crystal structure of Pizza6-AYW 分子名称: Pizza6-AYW 著者 Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D. 登録日 2017-11-20 公開日 2018-03-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies. Biochem. Biophys. Res. Commun., 497, 2018
1P99	1.7A crystal structure of protein PG110 from Staphylococcus aureus 分子名称: GLYCINE, Hypothetical protein PG110, METHIONINE 著者 Zhang, R, Zhou, M, Joachimiak, G, Schneewind, O, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2003-05-09 公開日 2004-01-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The membrane-associated lipoprotein-9 GmpC from Staphylococcus aureus binds the dipeptide GlyMet via side chain interactions. Biochemistry, 43, 2004
5YSC	Crystal Structure of periplasmic Vitamin B12 binding protein BtuF of Vibrio cholerae 分子名称: CYANOCOBALAMIN, SULFATE ION, Vitamin B12-binding protein 著者 Agarwal, S, Ghosh, B, Dasgupta, J. 登録日 2017-11-13 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.673 Å) 主引用文献 Mechanistic basis of vitamin B12 and cobinamide salvaging by the Vibrio species. Biochim Biophys Acta Proteins Proteom, 1867, 2019
6MQU	PL5, synthetic transmembrane domain variant of human phospholamban 分子名称: PL5, designed TM pentamer 著者 Mravic, M, Thomaston, J.L, DeGrado, W.F. 登録日 2018-10-10 公開日 2019-04-03 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.17 Å) 主引用文献 Packing of apolar side chains enables accurate design of highly stable membrane proteins. Science, 363, 2019
6F0S	Crystal structure of Pizza6-SYW 分子名称: Pizza6-SYW 著者 Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D. 登録日 2017-11-20 公開日 2018-03-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies. Biochem. Biophys. Res. Commun., 497, 2018
6F0T	Crystal structure of Pizza6-SFW 分子名称: GLYCEROL, Pizza6-SFW 著者 Noguchi, H, De Zitter, E, Van Meervelt, L, Voet, A.R.D. 登録日 2017-11-20 公開日 2018-03-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies. Biochem. Biophys. Res. Commun., 497, 2018
5YS7	Crystal structure of an OspA mutant 分子名称: Outer Surface Protein A 著者 Takada, S, Makabe, K. 登録日 2017-11-13 公開日 2018-11-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of an OspA mutant To Be Published
6NEK	Crystal structure of a consensus PDZ domain 分子名称: 1,2-ETHANEDIOL, Consensus PDZ domain 著者 Sun, Y.J, Gakhar, L, Fuentes, E.J. 登録日 2018-12-17 公開日 2019-12-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Consensus PDZ domain To be published
4LQU	1.60A resolution crystal structure of a superfolder green fluorescent protein (W57G) mutant 分子名称: Green fluorescent protein 著者 Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J. 登録日 2013-07-19 公開日 2013-12-18 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation. J.Am.Chem.Soc., 135, 2013
6OLN	Controlling the Self-Assembly of Synthetic Metal-Coordinating Coiled-Coil Peptides: Orthorhombic Lattice from a Trimeric Coiled Coil 分子名称: CHLORIDE ION, COPPER (II) ION, Designed trimeric coiled coil peptide 著者 Scheib, K.A, Horne, W.S. 登録日 2019-04-16 公開日 2020-02-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Understanding and controlling the metal-directed assembly of terpyridine-functionalized coiled-coil peptides. Chem.Commun.(Camb.), 55, 2019
6RLH	The structure of 3fPizza6-SH obtained via vapour diffusion 分子名称: 3fPizza6-SH 著者 Noguchi, H, Voet, A.R.D. 登録日 2019-05-02 公開日 2020-11-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Self-assembled Pizza proteins To Be Published
4NTR	Crystal structure of macrocycles containing Abeta 17-23 (LVFFAED) and Abeta 30-36 (AII(SAR)L(ORN)V) 分子名称: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LVFFAED(ORN)AII(SAR)L(ORN)V, SODIUM ION 著者 Spencer, R.K, Li, H, Nowick, J.S. 登録日 2013-12-02 公開日 2014-04-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36). J.Am.Chem.Soc., 136, 2014
6NL6	Crystal structure of mutant B1 immunoglobulin-binding domain of Streptococcal Protein G (T16F, T18A, V21E, T25L, K28Y, V29I, K31R, Q32H, Y33L, N35K, D36H, N37Q) 分子名称: CHLORIDE ION, Immunoglobulin G-binding protein G, ZINC ION 著者 Huxford, T, Stec, B, Maniaci, B. 登録日 2019-01-08 公開日 2019-01-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Design of High-Affinity Metal-Controlled Protein Dimers. Biochemistry, 58, 2019
6BZX	Structure of the artificial complex alpha-Rep/Octarellin V.1 crystallized by counter diffusion in a capillary 分子名称: Octarellin V.1, SODIUM ION, alpha-Rep 著者 Aedo, F, Contreras-Martel, C, Martinez-Oyanedel, J, Bunster, M, Minard, P, Van de Weerdt, C, Figueroa, M. 登録日 2017-12-26 公開日 2019-01-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.107 Å) 主引用文献 Crystallization of the artificial complex alpha-Rep/Octarellin V.1 by counter diffusion allowed to have a most complete structure To Be Published
6NJF	Solution NMR Structure of DANCER3-F34A, a rigid and natively folded single mutant of the dynamic protein DANCER-3 分子名称: Immunoglobulin G-binding protein G 著者 Damry, A.M, Mayer, M.M, Goto, N.K, Chica, R.A. 登録日 2019-01-03 公開日 2019-08-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Origin of conformational dynamics in a globular protein. Commun Biol, 2, 2019
6OVU	Coiled-coil Trimer with Glu:3,4-difluorophenylalanine:Lys Triad 分子名称: Coiled-coil Trimer with Glu:3,4-difluorophenylalanine:Lys Triad 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-05-08 公開日 2020-04-29 最終更新日 2020-05-20 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6OS8	Coiled-coil Trimer with Glu:p-fluorophenylalanine:Lys Triad 分子名称: Coiled-coil trimer with Glu:p-fluorophenylalanine:Lys Triad 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-05-01 公開日 2020-04-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
4LQT	1.10A resolution crystal structure of a superfolder green fluorescent protein (W57A) mutant 分子名称: 1,2-ETHANEDIOL, Green fluorescent protein 著者 Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J. 登録日 2013-07-19 公開日 2013-12-18 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation. J.Am.Chem.Soc., 135, 2013
6RLI	The structure of the self-assembled 3fPizza6-SH crystal 分子名称: 3fPizza6-SH 著者 Noguchi, H, Voet, A.R.D. 登録日 2019-05-02 公開日 2020-11-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Self-assembled Pizza proteins To Be Published

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