PDB: 11035 件ウェブページステータス検索Chemie searchBIRD

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5B80	Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Cu2+ 分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, COPPER (II) ION, Uncharacterized protein TM_0416 著者 Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H. 登録日 2016-06-10 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions Appl. Environ. Microbiol., 83, 2017
6OZF	Crystal structure of Thermotoga maritima (Tm) Endonuclease V (D110N) in complex with a 12mer DNA containing an inosine followed by a ribo-adenosine 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DNA/RNA (5'-D(P*AP*AP*TP*GP*I)-R(P*A)-D(P*GP*AP*TP*GP*CP*T)-3'), ... 著者 Samara, N.L, Yang, W. 登録日 2019-05-15 公開日 2019-09-04 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6OZG	Crystal structure of Thermotoga maritima (Tm) Endonuclease V (E89Q) in complex with a 12mer DNA containing an inosine followed by a ribo-adenosine 分子名称: 1,2-ETHANEDIOL, DNA/RNA (5'-D(*AP*AP*TP*GP*A)-R(P*A)-D(P*GP*AP*T)-R(P*NP*N)-D(P*T)-3'), Endonuclease V, ... 著者 Samara, N.L, Yang, W. 登録日 2019-05-15 公開日 2019-09-04 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
2JAL	Beta-glucosidase from Thermotoga maritima in complex with cyclophellitol 分子名称: (1R,2S,3S,4S,5R,6R)-6-(HYDROXYMETHYL)CYCLOHEXANE-1,2,3,4,5-PENTOL, ACETATE ION, BETA-GLUCOSIDASE A, ... 著者 Gloster, T.M, Madsen, R, Davies, G.J. 登録日 2006-11-29 公開日 2007-01-03 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis for Cyclophellitol Inhibition of a Beta-Glucosidase. Org.Biomol.Chem., 5, 2007
6AZR	Crystal structure of the T264A HK853cp-BeF3-RR468 complex 分子名称: Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Rose, J, Zhou, P. 登録日 2017-09-11 公開日 2017-12-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.628 Å) 主引用文献 A pH-gated conformational switch regulates the phosphatase activity of bifunctional HisKA-family histidine kinases. Nat Commun, 8, 2017
8AWN	Crystal structure of a manganese-containing cupin (tm1459) from Thermotoga maritima, variant C106Q 分子名称: CHLORIDE ION, Cupin_2 domain-containing protein 著者 Grininger, C, Steiner, K, Gruber, K, Pavkov-Keller, T. 登録日 2022-08-30 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Engineering TM1459 for Stabilisation against Inactivation by Amino Acid Oxidation Chem Ing Tech, 2023
8AWP	Crystal structure of a manganese-containing cupin (tm1459) from Thermotoga maritima, variant 208 (V19I/R23H/M38I/I60F/C106Q) 分子名称: Cupin_2 domain-containing protein 著者 Grininger, C, Steiner, K, Gruber, K, Pavkov-Keller, T. 登録日 2022-08-30 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.595 Å) 主引用文献 Engineering TM1459 for Stabilisation against Inactivation by Amino Acid Oxidation Chem Ing Tech, 2023
8AWO	Crystal structure of a manganese-containing cupin (tm1459) from Thermotoga maritima, variant AIFQ (Y7A/M38I/Y83F/C106Q) 分子名称: Cupin_2 domain-containing protein 著者 Grininger, C, Steiner, K, Gruber, K, Pavkov-Keller, T. 登録日 2022-08-30 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Engineering TM1459 for Stabilisation against Inactivation by Amino Acid Oxidation Chem Ing Tech, 2023
4M8A	Crystal Structure of Thermotoga maritima FtsH Periplasmic Domain 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ATP-dependent zinc metalloprotease FtsH 著者 An, J.Y, Sharif, H, Barrera, F.N, Karabadzhak, A, Kang, G.B, Park, K.J, Sakkiah, S, Lee, K.W, Lee, S, Engelman, D.M, Wang, J, Eom, S.H. 登録日 2013-08-13 公開日 2014-09-17 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.502 Å) 主引用文献 Structural roles of periplasmic and transmembrane domains of FtsH in ATP-dependent proteolysis To be Published
5B7Z	Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Ni2+ 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, NICKEL (II) ION, ... 著者 Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H. 登録日 2016-06-10 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions Appl. Environ. Microbiol., 83, 2017
8B24	Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 3600-seconds post reaction initiation with Na+ 分子名称: DIPHOSPHATE, K(+)-stimulated pyrophosphate-energized sodium pump, MAGNESIUM ION, ... 著者 Strauss, J, Vidilaseris, K, Goldman, A. 登録日 2022-09-12 公開日 2024-01-17 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (4.53 Å) 主引用文献 Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases. Embo Rep., 25, 2024
8B22	Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 300-seconds post reaction initiation with Na+ 分子名称: DIPHOSPHATE, K(+)-stimulated pyrophosphate-energized sodium pump, MAGNESIUM ION 著者 Strauss, J, Vidilaseris, K, Goldman, A. 登録日 2022-09-12 公開日 2024-01-17 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (3.98 Å) 主引用文献 Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases. Embo Rep., 25, 2024
8B23	Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 600-seconds post reaction initiation with Na+ 分子名称: DIPHOSPHATE, K(+)-stimulated pyrophosphate-energized sodium pump, MAGNESIUM ION 著者 Strauss, J, Vidilaseris, K, Goldman, A. 登録日 2022-09-12 公開日 2024-01-17 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (3.84 Å) 主引用文献 Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases. Embo Rep., 25, 2024
8B21	Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 0-60-seconds post reaction initiation with Na+ 分子名称: DI(HYDROXYETHYL)ETHER, DODECYL-BETA-D-MALTOSIDE, K(+)-stimulated pyrophosphate-energized sodium pump, ... 著者 Strauss, J, Vidilaseris, K, Goldman, A. 登録日 2022-09-12 公開日 2024-01-17 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases. Embo Rep., 25, 2024
3DIN	Crystal structure of the protein-translocation complex formed by the SecY channel and the SecA ATPase 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Zimmer, J, Nam, Y, Rapoport, T.A. 登録日 2008-06-20 公開日 2008-10-07 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature, 455, 2008
4U3E	Anaerobic ribonucleotide reductase 分子名称: ACETATE ION, CITRIC ACID, GLYCEROL, ... 著者 Funk, M.A, Drennan, C.L. 登録日 2014-07-20 公開日 2014-09-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 The class III ribonucleotide reductase from Neisseria bacilliformis can utilize thioredoxin as a reductant. Proc.Natl.Acad.Sci.USA, 111, 2014
7QAZ	Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 - Primer Initiation Complex 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, COBALT (II) ION, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Li, A.W.H, Doherty, A.J. 登録日 2021-11-17 公開日 2022-05-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Molecular basis for the initiation of DNA primer synthesis. Nature, 605, 2022
7QC6	HisF_C9A_L50H_I52H mutant (apo) from T. maritima 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Imidazole glycerol phosphate synthase subunit HisF 著者 Beaumet, M, Dose, A, Braeuer, A, Mahy, J, Ghattas, W, Groll, M, Hess, C. 登録日 2021-11-22 公開日 2022-08-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 An artificial metalloprotein with metal-adaptive coordination sites and Ni-dependent quercetinase activity. J.Inorg.Biochem., 235, 2022
7QC7	HisF-C9A-D11E-V33A_L50H_I52H mutant (apo) from T. maritima 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Imidazole glycerol phosphate synthase subunit HisF 著者 Beaumet, M, Dose, A, Braeuer, A, Mahy, J, Ghattas, W, Groll, M, Hess, C. 登録日 2021-11-22 公開日 2022-08-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 An artificial metalloprotein with metal-adaptive coordination sites and Ni-dependent quercetinase activity. J.Inorg.Biochem., 235, 2022
7QC8	HisF-C9A-D11E-V33A_L50H_I52H mutant in complex with Zn(II) from T. maritima 分子名称: Imidazole glycerol phosphate synthase subunit HisF, SULFATE ION, ZINC ION 著者 Beaumet, M, Dose, A, Braeuer, A, Mahy, J, Ghattas, W, Groll, M, Hess, C. 登録日 2021-11-22 公開日 2022-08-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 An artificial metalloprotein with metal-adaptive coordination sites and Ni-dependent quercetinase activity. J.Inorg.Biochem., 235, 2022
7QC9	HisF-C9A-D11E-V33A_L50H_I52H mutant in complex with Ni(II) from T. maritima 分子名称: 1,2-ETHANEDIOL, Imidazole glycerol phosphate synthase subunit HisF, NICKEL (II) ION, ... 著者 Beaumet, M, Dose, A, Braeuer, A, Mahy, J, Ghattas, W, Groll, M, Hess, C. 登録日 2021-11-22 公開日 2022-08-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 An artificial metalloprotein with metal-adaptive coordination sites and Ni-dependent quercetinase activity. J.Inorg.Biochem., 235, 2022
7QC3	HisF from T. maritima 分子名称: Imidazole glycerol phosphate synthase subunit HisF 著者 Beaumet, M, Dose, A, Braeuer, A, Mahy, J, Ghattas, W, Groll, M, Hess, C. 登録日 2021-11-22 公開日 2022-08-10 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 An artificial metalloprotein with metal-adaptive coordination sites and Ni-dependent quercetinase activity. J.Inorg.Biochem., 235, 2022
7OSK	Ignisphaera aggregans GH53 catalytic domain 分子名称: Arabinogalactan endo-1,4-beta-galactosidase, CALCIUM ION, CHLORIDE ION, ... 著者 Fredslund, F, Lo Leggio, L, Poulsen, J.C, Rasmussen, K.K, Muderspach, S, Krogh, K.B.R.M, Jensen, K. 登録日 2021-06-08 公開日 2021-09-29 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Engineering the substrate binding site of the hyperthermostable archaeal endo-beta-1,4-galactanase from Ignisphaera aggregans. Biotechnol Biofuels, 14, 2021
7BR4	Structure of deletion mutant of alpha-glucuronidase (TM0752) from Thermotoga maritima 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alpha-glucosidase, putative, ... 著者 Manoj, N, Mohapatra, S.B. 登録日 2020-03-26 公開日 2021-03-31 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A conserved pi-helix plays a key role in thermoadaptation of catalysis in the glycoside hydrolase family 4. Biochim Biophys Acta Proteins Proteom, 1869, 2021
5M12	Structure of GH36 alpha-galactosidase from Thermotoga maritima in complex with intact cyclopropyl-carbasugar. 分子名称: (1~{R},2~{S},3~{S},4~{R},5~{S},6~{S})-5-[3,5-bis(fluoranyl)phenoxy]-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3,4-triol, Alpha-galactosidase, MAGNESIUM ION, ... 著者 Pengelly, R, Gloster, T. 登録日 2016-10-07 公開日 2016-11-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars. Angew.Chem.Int.Ed.Engl., 55, 2016

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