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7REP
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BU of 7rep by Molmil
Crystal structure of an engineered variant of single-chain Penicillin G Acylase from Kluyvera cryocrescens (A1-Ac Rd3CHis)
分子名称: CALCIUM ION, Penicillin G acylase, phenylmethanesulfonic acid
著者Orth, P.
登録日2021-07-13
公開日2021-11-17
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.192 Å)
主引用文献A chemoenzymatic strategy for site-selective functionalization of native peptides and proteins.
Science, 376, 2022
6XTW
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BU of 6xtw by Molmil
HumRadA33F in complex with peptidic inhibitor 6
分子名称: DNA repair and recombination protein RadA, SULFATE ION, ~{N}-[2-[(2~{S})-2-[[(1~{S})-1-(4-methoxyphenyl)ethyl]carbamoyl]pyrrolidin-1-yl]-2-oxidanylidene-ethyl]quinoline-2-carboxamide
著者Fischer, G, Marsh, M.E, Scott, D.E, Coyne, A.G, Skidmore, J, Abell, C, Hyvonen, M.
登録日2020-01-16
公開日2021-01-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献A small-molecule inhibitor of the BRCA2-RAD51 interaction modulates RAD51 assembly and potentiates DNA damage-induced cell death.
Cell Chem Biol, 28, 2021
7WDP
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BU of 7wdp by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
6U0B
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BU of 6u0b by Molmil
Neutron crystal structure of wtT4LD
分子名称: CHLORIDE ION, Endolysin
著者Cuneo, M.J, Myles, D.A, Li, L.
登録日2019-08-14
公開日2020-08-19
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.951 Å), X-RAY DIFFRACTION
主引用文献Solvent entry into cavities of T4 lysozyme.
To be published
7CCF
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BU of 7ccf by Molmil
Mechanism insights on steroselective oxidation of phosphorylated ethylphenols with cytochrome P450 CreJ
分子名称: (3-ethylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Dong, S, Du, L, Li, S.Y, Feng, Y.G.
登録日2020-06-17
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Selective Oxidation of Phosphorylated Ethylphenols by Cytochrome P450 Monooxygenase CreJ.
Appl.Environ.Microbiol., 87, 2021
6IP8
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BU of 6ip8 by Molmil
Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
登録日2018-11-02
公開日2019-05-29
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
3WGT
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BU of 3wgt by Molmil
Crystal structure of D-amino acid oxidase mutant
分子名称: (1R)-1-phenylethanamine, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Yasukawa, K, Nakano, S, Asano, Y.
登録日2013-08-09
公開日2014-04-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Tailoring D-amino acid oxidase from the pig kidney to R-stereoselective amine oxidase and its use in the deracemization of alpha-methylbenzylamine.
Angew.Chem.Int.Ed.Engl., 53, 2014
2XKV
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BU of 2xkv by Molmil
Atomic Model of the SRP-FtsY Early Conformation
分子名称: 4.5S RNA, CELL DIVISION PROTEIN FTSY, SIGNAL RECOGNITION PARTICLE PROTEIN
著者Estrozi, L.F, Boehringer, D, Shan, S.-o, Ban, N, Schaffitzel, C.
登録日2010-07-13
公開日2010-12-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Cryo-Em Structure of the E. Coli Translating Ribosome in Complex with Srp and its Receptor.
Nat.Struct.Mol.Biol., 18, 2011
7REO
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BU of 7reo by Molmil
Crystal structure of an engineered variant of single-chain Penicillin G Acylase from Kluyvera cryocrescens (global hydrolysis Rd3CHis)
分子名称: CALCIUM ION, Penicillin G Acylase
著者Orth, P.
登録日2021-07-13
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.812 Å)
主引用文献A chemoenzymatic strategy for site-selective functionalization of native peptides and proteins.
Science, 376, 2022
7WDS
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BU of 7wds by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-xylopyranose
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
6U1V
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BU of 6u1v by Molmil
Crystal structure of acyl-ACP/acyl-CoA dehydrogenase from allylmalonyl-CoA and FK506 biosynthesis, TcsD
分子名称: Acyl-CoA dehydrogenase domain-containing protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
著者Blake-Hedges, J.M, Pereira, J.H, Barajas, J.F, Adams, P.D, Keasling, J.D.
登録日2019-08-16
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Mechanism of Regioselectivity in an Unusual Bacterial Acyl-CoA Dehydrogenase.
J.Am.Chem.Soc., 142, 2020
6CEP
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BU of 6cep by Molmil
Sus scrofa heart L-lactate dehydrogenase ternary complex with NADH and oxamate
分子名称: L-lactate dehydrogenase B chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXAMIC ACID
著者Hoffer, E.D, Andrews, B, Dunham, C.M, Dyer, R.B.
登録日2018-02-12
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Small molecule cores demonstrate non-competitive inhibition of lactate dehydrogenase.
Medchemcomm, 9, 2018
6CC7
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BU of 6cc7 by Molmil
Structure of Fungal GH62 from Thielavia terretris
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glycoside hydrolase family 62 protein, ...
著者Camargo, S, Mulinari, E.J, Almeida, L.R, Muniz, J.R.C.
登録日2018-02-06
公開日2019-02-13
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structure of Fungal GH62 from Thielavia terretris
To Be Published
7WDV
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BU of 7wdv by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
分子名称: Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
著者Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
登録日2021-12-22
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.812 Å)
主引用文献Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
8C29
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BU of 8c29 by Molmil
Cryo-EM structure of photosystem II C2S2 supercomplex from Norway spruce (Picea abies) at 2.8 Angstrom resolution
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Kopecny, D, Semchonok, D.A, Kouril, R.
登録日2022-12-21
公開日2023-07-26
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (2.785 Å)
主引用文献Cryo-EM structure of a plant photosystem II supercomplex with light-harvesting protein Lhcb8 and alpha-tocopherol.
Nat.Plants, 9, 2023
6U02
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BU of 6u02 by Molmil
CryoEM-derived model of NA-63 Fab in complex with N9 Shanghai2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab-63 Heavy Chain, Fab-63 Light Chain, ...
著者Ward, A.B, Turner, H.L, Zhu, X.
登録日2019-08-13
公開日2019-12-04
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies.
Cell Host Microbe, 26, 2019
6U8Y
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BU of 6u8y by Molmil
Structure of the membrane-bound sulfane sulfur reductase (MBS), an archaeal respiratory membrane complex
分子名称: DUF4040 domain-containing protein, IRON/SULFUR CLUSTER, Monovalent cation/H+ antiporter subunit B, ...
著者Yu, H.J, Li, H.L.
登録日2019-09-06
公開日2020-09-09
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of the respiratory MBS complex reveals iron-sulfur cluster catalyzed sulfane sulfur reduction in ancient life.
Nat Commun, 11, 2020
6YSV
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BU of 6ysv by Molmil
E. coli anaerobic trifunctional enzyme subunit-alpha
分子名称: Fatty acid oxidation complex subunit alpha, SULFATE ION
著者Sah-Teli, S.K, Hynonen, M.J, Wierenga, R.K, Venkatesan, R.
登録日2020-04-23
公開日2021-05-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for different membrane-binding properties of E. coli anaerobic and human mitochondrial beta-oxidation trifunctional enzymes
Structure, 2023
2O9P
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BU of 2o9p by Molmil
beta-glucosidase B from Paenibacillus polymyxa
分子名称: Beta-glucosidase B
著者Isorna, P, Polaina, J, Sanz-Aparicio, J.
登録日2006-12-14
公開日2007-10-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Paenibacillus polymyxa beta-Glucosidase B Complexes Reveal the Molecular Basis of Substrate Specificity and Give New Insights into the Catalytic Machinery of Family I Glycosidases
J.Mol.Biol., 371, 2007
7VUD
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BU of 7vud by Molmil
Carotenoid Cleavage Dioxygenase 1 from Osmanthus fragrans
分子名称: Carotenoid cleavage dioxygenase 1, NICKEL (II) ION, OXTOXYNOL-10, ...
著者Sharma, D, Xue, B.
登録日2021-11-02
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Carotenoid Cleavage Dioxygenase 1 from Osmanthus fragrans
To Be Published
6D4B
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BU of 6d4b by Molmil
Crystal structure of Candida boidinii formate dehydrogenase V123A mutant complexed with NAD+ and azide
分子名称: AZIDE ION, CHLORIDE ION, Formate dehydrogenase, ...
著者Guo, Q, Ye, H, Gakhar, L, Cheatum, C.M, Kohen, A.
登録日2018-04-17
公開日2019-04-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Oscillatory Active-site Motions Correlate with Kinetic Isotope Effects in Formate Dehydrogenase
Acs Catalysis, 2019
2XDD
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BU of 2xdd by Molmil
A processed non-coding RNA regulates a bacterial antiviral system
分子名称: TOXI, TOXN, ZINC ION
著者Blower, T.R, Pei, X.Y, Short, F.L, Fineran, P.C, Humphreys, D.P, Luisi, B.F, Salmond, G.P.C.
登録日2010-04-30
公開日2011-01-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Phage Abortive Infection System, Toxin, Functions as a Protein-RNA Toxin-Antitoxin Pair.
Proc.Natl.Acad.Sci.USA, 106, 2009
6YTP
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BU of 6ytp by Molmil
Structure of recombinant human beta-glucocerebrosidase in complex with azide tagged cyclophellitol epoxide inhibitor
分子名称: (1~{S},2~{R},3~{R},4~{S},5~{S})-4-[[($l^{5}-azanylidyne-$l^{5}-azanyl)amino]methyl]cyclohexane-1,2,3,5-tetrol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rowland, R.J, Davies, G.J.
登録日2020-04-24
公開日2021-05-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Design, Synthesis and Structural Analysis of Glucocerebrosidase Imaging Agents.
Chemistry, 27, 2021
2O8F
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BU of 2o8f by Molmil
human MutSalpha (MSH2/MSH6) bound to DNA with a single base T insert
分子名称: 5'-D(*CP*GP*CP*TP*AP*GP*CP*GP*TP*GP*CP*GP*GP*CP*CP*GP*TP*C)-3', 5'-D(*GP*AP*CP*GP*GP*CP*CP*GP*CP*CP*GP*CP*TP*AP*GP*CP*G)-3', ADENOSINE-5'-DIPHOSPHATE, ...
著者Warren, J.J, Pohlhaus, T.J, Changela, A, Modrich, P.L, Beese, L.S.
登録日2006-12-12
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structure of the Human MutSalpha DNA Lesion Recognition Complex.
Mol.Cell, 26, 2007
6YTR
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BU of 6ytr by Molmil
Structure of recombinant human beta-glucocerebrosidase in complex with cyclophellitol aziridine inhibitor
分子名称: (1~{R},2~{S},3~{S},4~{S},5~{R},6~{R})-5-azanyl-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rowland, R.J, Davies, G.J.
登録日2020-04-24
公開日2021-05-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Design, Synthesis and Structural Analysis of Glucocerebrosidase Imaging Agents.
Chemistry, 27, 2021

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