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6LXN
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Crystal structure of C-terminal DNA-binding domain of Escherichia coli OmpR in complex with F1-DNA
分子名称: DNA (27-MER), SULFATE ION, Transcriptional regulatory protein OmpR
著者Sadotra, S, Chen, C, Hsu, C.H.
登録日2020-02-11
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Structural basis for promoter DNA recognition by the response regulator OmpR.
J.Struct.Biol., 213, 2020
6OPB
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BU of 6opb by Molmil
Structure of Aedes aegypti OBP22 in the complex with arachidic acid
分子名称: AAEL005772-PA, DIMETHYL SULFOXIDE, icosanoic acid
著者Jones, D.N, Wang, J.
登録日2019-04-24
公開日2019-05-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Aedes aegypti Odorant Binding Protein 22 selectively binds fatty acids through a conformational change in its C-terminal tail.
Sci Rep, 10, 2020
5I6T
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BU of 5i6t by Molmil
Crystal structure of color device state C
分子名称: DNA (26-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*GP*TP*GP*GP*TP*AP*TP*C)-3'), DNA (5'-D(*CP*AP*GP*AP*TP*AP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*TP*AP*CP*G)-3'), ...
著者Hao, Y, Birktoft, J, Seeman, N.C.
登録日2016-02-16
公開日2017-01-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (5.283 Å)
主引用文献A device that operates within a self-assembled 3D DNA crystal.
Nat Chem, 9, 2017
8K5O
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BU of 8k5o by Molmil
Cryo-EM structure of the RC-LH core comples from Halorhodospira halochloris
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 2-O-octyl-beta-D-glucopyranose, ...
著者Wang, G.-L, Qi, C.-H, Yu, L.-J.
登録日2023-07-22
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.42 Å)
主引用文献Structural insights into the unusual core photocomplex from a triply extremophilic purple bacterium, Halorhodospira halochloris.
J Integr Plant Biol, 2024
7AG5
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BU of 7ag5 by Molmil
Structure of the Laspartomycin C double mutant G4D D-allo-Thr9D-Dap in complex with Geranyl phosphate
分子名称: (~{E})-13-methyltetradec-2-enoic acid, CALCIUM ION, Geranyl phosphate, ...
著者Zeronian, M.R, Pearce, N.M, Wood, T.M, Martin, N.I, Janssen, B.J.C.
登録日2020-09-21
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Mechanistic insights into the C55-P targeting lipopeptide antibiotics revealed by structure-activity studies and high-resolution crystal structures
Chem Sci, 13, 2022
8POH
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BU of 8poh by Molmil
Influenza A/H7N9 polymerase symmetric dimer bound to the promoter (PA K289A/C489R)
分子名称: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, Polymerase acidic protein, ...
著者Arragain, B, Cusack, S.
登録日2023-07-04
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome.
Nat Commun, 15, 2024
6Y9O
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BU of 6y9o by Molmil
Crystal structure of Whirlin PDZ3_C-ter in complex with CASK internal PDZ binding motif peptide
分子名称: Peripheral plasma membrane protein CASK, Whirlin
著者Zhu, Y, Delhommel, F, Haouz, A, Caillet-Saguy, C, Vaney, M, Mechaly, A.E, Wolff, N.
登録日2020-03-10
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.632 Å)
主引用文献Deciphering the Unexpected Binding Capacity of the Third PDZ Domain of Whirlin to Various Cochlear Hair Cell Partners.
J.Mol.Biol., 432, 2020
8R6W
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BU of 8r6w by Molmil
Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING]
分子名称: RNA (5'-R(*(M7G)*AP*AP*A)-3'), RNA (5'-R(*AP*CP*AP*C)-3'), RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*G)-3'), ...
著者Williams, H.M, Thorkelsson, S.R, Vogel, D, Busch, C, Milewski, M, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
登録日2023-11-23
公開日2024-04-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural snapshots of phenuivirus cap-snatching and transcription.
Nucleic Acids Res., 52, 2024
6Y9Q
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BU of 6y9q by Molmil
Crystal structure of Whirlin PDZ3_C-ter in complex with Taperin internal PDZ binding motif peptide
分子名称: Taperin, Whirlin
著者Zhu, Y, Delhommel, F, Haouz, A, Caillet-Saguy, C, Vaney, M, Mechaly, A.E, Wolff, N.
登録日2020-03-10
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.315 Å)
主引用文献Deciphering the Unexpected Binding Capacity of the Third PDZ Domain of Whirlin to Various Cochlear Hair Cell Partners.
J.Mol.Biol., 432, 2020
8FX7
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Non-ribosomal PCP-C didomain (ester stabilised leucine) acceptor bound state
分子名称: 2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl L-leucinate, PCP-C didomain
著者Ho, Y.T.C, Cryle, M.J.
登録日2023-01-24
公開日2023-06-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Not always an innocent bystander: the impact of stabilised phosphopantetheine moieties when studying nonribosomal peptide biosynthesis.
Chem.Commun.(Camb.), 59, 2023
8FX6
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Non-ribosomal PCP-C didomain (amide stabilised leucine) acceptor bound state
分子名称: N-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]-L-leucinamide, PCP-C didomain
著者Ho, Y.T.C, Cryle, M.J.
登録日2023-01-24
公開日2023-06-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Not always an innocent bystander: the impact of stabilised phosphopantetheine moieties when studying nonribosomal peptide biosynthesis.
Chem.Commun.(Camb.), 59, 2023
5V3G
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BU of 5v3g by Molmil
PRDM9-allele-C ZnF8-13
分子名称: DNA (5'-D(*AP*GP*GP*GP*CP*AP*AP*CP*GP*CP*TP*CP*AP*CP*TP*GP*GP*GP*GP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*CP*CP*CP*CP*AP*GP*TP*GP*AP*GP*CP*GP*TP*TP*GP*CP*CP*C)-3'), PR domain zinc finger protein 9, ...
著者Patel, A, Cheng, X.
登録日2017-03-07
公開日2017-08-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.416 Å)
主引用文献Structural basis of human PR/SET domain 9 (PRDM9) allele C-specific recognition of its cognate DNA sequence.
J. Biol. Chem., 292, 2017
6IH1
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BU of 6ih1 by Molmil
Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - c-di-GMP bound form
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, cyclic di nucleotide phoshodiesterase
著者Yadav, M, Pal, K, Sen, U.
登録日2018-09-28
公開日2019-10-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication.
Biochem.J., 476, 2019
5GIO
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BU of 5gio by Molmil
Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates
分子名称: 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
著者Yang, Z, Lin, J, Ye, K.
登録日2016-06-24
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.604 Å)
主引用文献Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
5M1M
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BU of 5m1m by Molmil
Crystal structure of matrix protein 1 from Influenza C virus (strain C/Ann Arbor/1/1950)
分子名称: MAGNESIUM ION, Matrix protein 1
著者Radzimanowski, J, Weissenhorn, W.
登録日2016-10-09
公開日2017-02-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Matrix protein M1 from influenza C virus induces tubular membrane invaginations in an in vitro cell membrane model.
Sci Rep, 7, 2017
6SE6
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BU of 6se6 by Molmil
Class2 : CENP-A nucleosome in complex with CENP-C central region
分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-29
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
6SEE
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BU of 6see by Molmil
Class2A : CENP-A nucleosome in complex with CENP-C central region
分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-29
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
6SEF
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BU of 6sef by Molmil
Class2C : CENP-A nucleosome in complex with CENP-C central region
分子名称: Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ...
著者Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N.
登録日2019-07-29
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail.
Embo Rep., 20, 2019
5MAB
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BU of 5mab by Molmil
FoxE P3121 crystal structure of Rhodopseudomonas ferrooxidans SW2 putative iron oxidase
分子名称: COPPER (II) ION, FoxE, HEME C, ...
著者Pereira, L, Saraiva, I.H, Oliveira, A.S, Soares, C, Gomes, R.O, Frazao, C.
登録日2016-11-03
公開日2017-12-20
実験手法X-RAY DIFFRACTION (2.436 Å)
主引用文献FoxE P3121 crystal structure of Rhodopseudomonas ferrooxidans SW2 putative iron oxidase
To be published
5GIP
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BU of 5gip by Molmil
Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates
分子名称: 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
著者Yang, Z, Lin, J, Ye, K.
登録日2016-06-24
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.129 Å)
主引用文献Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
6WN9
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BU of 6wn9 by Molmil
Structure of Staphylococcus aureus peptidoglycan O-acetyltransferase A (OatA) C-terminal catalytic domain, Zn-bound
分子名称: Acetyltransferase, ZINC ION
著者Jones, C.J, Sychantha, D, Howell, P.L, Clarke, A.J.
登録日2020-04-22
公開日2020-05-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis for theO-acetyltransferase function of the extracytoplasmic domain of OatA fromStaphylococcus aureus.
J.Biol.Chem., 295, 2020
5KC1
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BU of 5kc1 by Molmil
Structure of the C-terminal dimerization domain of Atg38
分子名称: 1,2-ETHANEDIOL, AMMONIUM ION, Autophagy-related protein 38, ...
著者Ohashi, Y, Soler, N, Garcia-Ortegon, M, Zhang, L, Perisic, O, Masson, G.R, Johnson, C.M, Williams, R.J.
登録日2016-06-04
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization of Atg38 and NRBF2, a fifth subunit of the autophagic Vps34/PIK3C3 complex.
Autophagy, 12, 2016
6WY7
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CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-41 A.K.A 7-[1-phenyl-3-({4-phenylbicyclo[2.2.2]octan-1-yl}amino)propyl]-3H-[1,2,3]triazolo[4,5-b]pyridin-5-amine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-{(1R)-1-phenyl-3-[(4-phenylbicyclo[2.2.2]octan-1-yl)amino]propyl}-3H-[1,2,3]triazolo[4,5-b]pyridin-5-amine, CALCIUM ION, ...
著者Khan, J.A.
登録日2020-05-12
公開日2020-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.089 Å)
主引用文献Discovery and structure activity relationships of 7-benzyl triazolopyridines as stable, selective, and reversible inhibitors of myeloperoxidase.
Bioorg.Med.Chem., 28, 2020
6K7C
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Dimeric Shewanella violacea cytochrome c5
分子名称: HEME C, NITRATE ION, Soluble cytochrome cA
著者Yang, H, Yamanaka, M, Nagao, S, Yasuhara, K, Shibata, N, Higuchi, Y, Hirota, S.
登録日2019-06-07
公開日2019-09-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Protein surface charge effect on 3D domain swapping in cells for c-type cytochromes.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
6WXZ
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CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-29 A.K.A 7-(1,2-DIPHENYLETHYL)-1H-[1,2,3]TRIAZOLO[4,5-B]PYRIDIN-5-AMINE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-[(1R)-1,2-diphenylethyl]-3H-[1,2,3]triazolo[4,5-b]pyridin-5-amine, CALCIUM ION, ...
著者Khan, J.A.
登録日2020-05-12
公開日2020-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.226 Å)
主引用文献Discovery and structure activity relationships of 7-benzyl triazolopyridines as stable, selective, and reversible inhibitors of myeloperoxidase.
Bioorg.Med.Chem., 28, 2020

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