Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7AEF
DownloadVisualize
BU of 7aef by Molmil
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 3-fold symmetry.
分子名称: Baseplate_J domain-containing protein, LysM domain-containing protein, Phage tail protein, ...
著者Xu, J, Ericson, C, Feldmueller, M, Lien, Y.W, Pilhofer, M.
登録日2020-09-17
公開日2022-02-23
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Identification and structure of an extracellular contractile injection system from the marine bacterium Algoriphagus machipongonensis.
Nat Microbiol, 7, 2022
7EAS
DownloadVisualize
BU of 7eas by Molmil
Crystal structure of human pyruvate dehydrogenase kinase 2 in complex with compound 2
分子名称: 1H-pyrrolo[2,3-b]pyridine-3-carbonitrile, ACETATE ION, CHLORIDE ION, ...
著者Orita, T, Doi, S, Iwanaga, T, Adachi, T.
登録日2021-03-08
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Fragment-based lead discovery to identify novel inhibitors that target the ATP binding site of pyruvate dehydrogenase kinases.
Bioorg.Med.Chem., 44, 2021
8OTE
DownloadVisualize
BU of 8ote by Molmil
TMEM106B Fold I-d filament from Guam ALS/PDC
分子名称: Transmembrane protein 106B
著者Qi, C, Yang, S, Scheres, S.H.W, Goedert, M.
登録日2023-04-20
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Tau filaments from amyotrophic lateral sclerosis/parkinsonism-dementia complex adopt the CTE fold.
Proc.Natl.Acad.Sci.USA, 120, 2023
7EHF
DownloadVisualize
BU of 7ehf by Molmil
Crystal structure of the aminoglycoside resistance methyltransferase NpmB1
分子名称: 1,2-ETHANEDIOL, 16S rRNA methyltransferase, CHLORIDE ION, ...
著者Kawai, A, Doi, Y.
登録日2021-03-29
公開日2021-08-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Functional and Structural Characterization of Acquired 16S rRNA Methyltransferase NpmB1 Conferring Pan-Aminoglycoside Resistance.
Antimicrob.Agents Chemother., 65, 2021
8OTC
DownloadVisualize
BU of 8otc by Molmil
CTE typeII tau filament from Guam ALS/PDC
分子名称: Microtubule-associated protein tau
著者Qi, C, Yang, S, Scheres, S.H.W, Goedert, M.
登録日2023-04-20
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Tau filaments from amyotrophic lateral sclerosis/parkinsonism-dementia complex adopt the CTE fold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8OTI
DownloadVisualize
BU of 8oti by Molmil
CTE typeIII tau filament
分子名称: Microtubule-associated protein tau
著者Tetter, S, Qi, C, Ryskeldi-Falcon, B, Scheres, S.H.W, Goedert, M.
登録日2023-04-20
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Tau filaments from amyotrophic lateral sclerosis/parkinsonism-dementia complex adopt the CTE fold.
Proc.Natl.Acad.Sci.USA, 120, 2023
2M5E
DownloadVisualize
BU of 2m5e by Molmil
Structure of the C-domain of Calcium-saturated Calmodulin bound to the IQ motif of NaV1.2
分子名称: CALCIUM ION, Calmodulin, Sodium channel protein type 2 subunit alpha
著者Fowler, C.A, Feldkamp, M.D, Yu, L, Shea, M.A.
登録日2013-02-21
公開日2014-07-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Calcium triggers reversal of calmodulin on nested anti-parallel sites in the IQ motif of the neuronal voltage-dependent sodium channel NaV1.2.
Biophys. Chem., 224, 2017
7PXP
DownloadVisualize
BU of 7pxp by Molmil
Benzoylsuccinyl-CoA thiolase
分子名称: Benzoylsuccinyl-CoA thiolase subunit, ZINC ION
著者Ermler, U, Heider, H, Weidenweber, S, Demmer, U.
登録日2021-10-08
公開日2022-04-06
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Finis tolueni: a new type of thiolase with an integrated Zn-finger subunit catalyzes the final step of anaerobic toluene metabolism.
Febs J., 289, 2022
8OTJ
DownloadVisualize
BU of 8otj by Molmil
PHF tau filament from Kii ALS/PDC
分子名称: Microtubule-associated protein tau
著者Qi, C, Yang, S, Scheres, S.H.W, Goedert, M.
登録日2023-04-20
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Tau filaments from amyotrophic lateral sclerosis/parkinsonism-dementia complex adopt the CTE fold.
Proc.Natl.Acad.Sci.USA, 120, 2023
7RVB
DownloadVisualize
BU of 7rvb by Molmil
High resolution map of molecular chaperone Artemin
分子名称: Ferritin
著者Parvate, A.D, Powell, S.M, Brookreason, J.T, Novikova, I.V, Evans, J.E.
登録日2021-08-18
公開日2022-12-14
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (2.04 Å)
主引用文献Cryo-EM structure of the diapause chaperone artemin.
Front Mol Biosci, 9, 2022
5KN9
DownloadVisualize
BU of 5kn9 by Molmil
MutY N-terminal domain in complex with DNA containing an intrahelical oxoG:A base-pair
分子名称: Adenine DNA glycosylase, CALCIUM ION, DNA (5'-D(*AP*GP*CP*AP*CP*AP*GP*GP*AP*T)-3'), ...
著者Wang, L, Chakravarthy, S, Verdine, G.L.
登録日2016-06-27
公開日2017-02-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural Basis for the Lesion-scanning Mechanism of the MutY DNA Glycosylase.
J. Biol. Chem., 292, 2017
8ONM
DownloadVisualize
BU of 8onm by Molmil
Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiense point mutant E113A complexed with D-glutamate
分子名称: (~{Z})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pent-2-enedioic acid, 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ...
著者Matyuta, I.O, Boyko, K.M, Minyaev, M.E, Shilova, S.A, Bezsudnova, E.Y, Popov, V.O.
登録日2023-04-03
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Probing of the structural and catalytic roles of the residues in the active site of transaminase from Aminobacterium colombiense
To Be Published
5KNC
DownloadVisualize
BU of 5knc by Molmil
Crystal structure of the 3 ADP-bound V1 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Suzuki, K, Mizutani, K, Maruyama, S, Shimono, K, Imai, F.L, Muneyuki, E, Kakinuma, Y, Ishizuka-Katsura, Y, Shirouzu, M, Yokoyama, S, Yamato, I, Murata, T.
登録日2016-06-28
公開日2016-11-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.015 Å)
主引用文献Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor
Nat Commun, 7, 2016
7PVJ
DownloadVisualize
BU of 7pvj by Molmil
Crystal structure of Thioredoxin Reductase from Brugia Malayi in complex with auranofin
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Fata, F, Ardini, M, Silvestri, I, Gabriele, F, Ippoliti, R, Gencheva, R, Cheng, Q, Arner, E.S.J, Angelucci, F, Williams, D.L.
登録日2021-10-04
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Biochemical and structural characterizations of thioredoxin reductase selenoproteins of the parasitic filarial nematodes Brugia malayi and Onchocerca volvulus.
Redox Biol, 51, 2022
7EIV
DownloadVisualize
BU of 7eiv by Molmil
heterotetrameric glycyl-tRNA synthetase from Escherichia coli
分子名称: GLYCINE, Glycine--tRNA ligase alpha subunit, Glycine--tRNA ligase beta subunit, ...
著者Ju, Y, Zhou, H.
登録日2021-03-31
公開日2021-08-11
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献X-shaped structure of bacterial heterotetrameric tRNA synthetase suggests cryptic prokaryote functions and a rationale for synthetase classifications.
Nucleic Acids Res., 49, 2021
5KP0
DownloadVisualize
BU of 5kp0 by Molmil
Recognition and targeting mechanisms by chaperones in flagella assembly and operation
分子名称: Flagellar protein FliT,Flagellum-specific ATP synthase
著者Khanra, N.K, Rossi, P, Economou, A, Kalodimos, C.G.
登録日2016-07-01
公開日2016-08-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Recognition and targeting mechanisms by chaperones in flagellum assembly and operation.
Proc.Natl.Acad.Sci.USA, 113, 2016
2MJ9
DownloadVisualize
BU of 2mj9 by Molmil
Designed Exendin-4 analogues
分子名称: Exendin-4
著者Rovo, P, Farkas, V, Straner, P, Szabo, M, Jermendy, A, Hegyi, O, Toth, G.K, Perczel, A.
登録日2013-12-30
公開日2014-06-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Rational design of alpha-helix-stabilized exendin-4 analogues.
Biochemistry, 53, 2014
7Q04
DownloadVisualize
BU of 7q04 by Molmil
Crystal structure of TPADO in a substrate-free state
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Lysozyme, ...
著者Zahn, M, Kincannon, W.M, DuBois, J.L, McGeehan, J.E.
登録日2021-10-14
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.281 Å)
主引用文献Biochemical and structural characterization of an aromatic ring-hydroxylating dioxygenase for terephthalic acid catabolism.
Proc.Natl.Acad.Sci.USA, 119, 2022
2ZFH
DownloadVisualize
BU of 2zfh by Molmil
Crystal structure of putative CutA1 from Homo sapiens at 2.05A resolution
分子名称: CutA
著者Bagautdinov, B, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-01-07
公開日2008-01-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of putative CutA1 from Homo sapiens determined at 2.05 A resolution.
Acta Crystallogr.,Sect.F, 64, 2008
5KK2
DownloadVisualize
BU of 5kk2 by Molmil
Architecture of fully occupied GluA2 AMPA receptor - TARP complex elucidated by single particle cryo-electron microscopy
分子名称: Glutamate receptor 2, Voltage-dependent calcium channel gamma-2 subunit
著者Zhao, Y, Chen, S, Yoshioka, C, Baconguis, I, Gouaux, E.
登録日2016-06-20
公開日2016-07-06
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Architecture of fully occupied GluA2 AMPA receptor-TARP complex elucidated by cryo-EM.
Nature, 536, 2016
7PW1
DownloadVisualize
BU of 7pw1 by Molmil
Crystal structure of ancestral haloalkane dehalogenase AncLinB-DmbA
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Haloalkane dehalogenase, ...
著者Mazur, A, Grinkevich, P, Prudnikova, T.
登録日2021-10-05
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of the Ancestral Haloalkane Dehalogenase AncLinB-DmbA.
Int J Mol Sci, 22, 2021
7EJS
DownloadVisualize
BU of 7ejs by Molmil
Structure of ERH-2 bound to PICS-1
分子名称: Enhancer of rudimentary homolog 2,Protein pid-3
著者Wang, X, Xu, C.
登録日2021-04-02
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.387 Å)
主引用文献Molecular basis for PICS-mediated piRNA biogenesis and cell division.
Nat Commun, 12, 2021
7JYW
DownloadVisualize
BU of 7jyw by Molmil
Crystal Structure of HLA A*2402 in complex with TYQWIIRNW, an 9-mer influenza epitope
分子名称: Beta-2-microglobulin, CALCIUM ION, MHC class I antigen, ...
著者Gras, S, Nguyen, A.T, Szeto, C, Rossjohn, J.
登録日2020-09-01
公開日2021-04-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献CD8 + T cell landscape in Indigenous and non-Indigenous people restricted by influenza mortality-associated HLA-A*24:02 allomorph.
Nat Commun, 12, 2021
7K3D
DownloadVisualize
BU of 7k3d by Molmil
The structure of NTMT1 in complex with compound DC1-13
分子名称: N-terminal Xaa-Pro-Lys N-methyltransferase 1, N~2~-{(2S)-1-[(naphthalen-1-yl)acetyl]-2,5-dihydro-1H-pyrrole-2-carbonyl}-L-lysyl-L-argininamide, S-ADENOSYL-L-HOMOCYSTEINE
著者Chen, D, Huang, R, Noinaj, N.
登録日2020-09-11
公開日2021-04-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structure-based Discovery of Cell-Potent Peptidomimetic Inhibitors for Protein N-Terminal Methyltransferase 1.
Acs Med.Chem.Lett., 12, 2021
7EJO
DownloadVisualize
BU of 7ejo by Molmil
Structure of ERH-2 bound to TOST-1
分子名称: Enhancer of rudimentary homolog 2, Enhancer of rudimentary homolog 2,Protein tost-1
著者Wang, X, Xu, C.
登録日2021-04-02
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.191 Å)
主引用文献Molecular basis for PICS-mediated piRNA biogenesis and cell division.
Nat Commun, 12, 2021

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon