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9MTR
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BU of 9mtr by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGS-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.80A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Aleksandrova, E.V, Syroegin, E.A, Basu, R.S, Vassilevski, A.A, Gagnon, M.G, Polikanov, Y.S.
登録日2025-01-12
公開日2025-06-18
最終更新日2025-07-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanism of release factor-mediated peptidyl-tRNA hydrolysis on the ribosome.
Science, 388, 2025
9MTQ
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BU of 9mtq by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Aleksandrova, E.V, Syroegin, E.A, Basu, R.S, Vassilevski, A.A, Gagnon, M.G, Polikanov, Y.S.
登録日2025-01-12
公開日2025-06-18
最終更新日2025-07-02
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Mechanism of release factor-mediated peptidyl-tRNA hydrolysis on the ribosome.
Science, 388, 2025
9MTS
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BU of 9mts by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Aleksandrova, E.V, Syroegin, E.A, Basu, R.S, Vassilevski, A.A, Gagnon, M.G, Polikanov, Y.S.
登録日2025-01-12
公開日2025-06-18
最終更新日2025-07-02
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanism of release factor-mediated peptidyl-tRNA hydrolysis on the ribosome.
Science, 388, 2025
9NO7
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BU of 9no7 by Molmil
Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Aleksandrova, E.V, Syroegin, E.A, Basu, R.S, Vassilevski, A.A, Gagnon, M.G, Polikanov, Y.S.
登録日2025-03-08
公開日2025-06-18
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.13 Å)
主引用文献Mechanism of release factor-mediated peptidyl-tRNA hydrolysis on the ribosome.
Science, 388, 2025
9MTP
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BU of 9mtp by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Aleksandrova, E.V, Syroegin, E.A, Basu, R.S, Vassilevski, A.A, Gagnon, M.G, Polikanov, Y.S.
登録日2025-01-12
公開日2025-06-18
最終更新日2025-07-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanism of release factor-mediated peptidyl-tRNA hydrolysis on the ribosome.
Science, 388, 2025
9MTT
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BU of 9mtt by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Aleksandrova, E.V, Syroegin, E.A, Basu, R.S, Vassilevski, A.A, Gagnon, M.G, Polikanov, Y.S.
登録日2025-01-12
公開日2025-06-18
最終更新日2025-07-02
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism of release factor-mediated peptidyl-tRNA hydrolysis on the ribosome.
Science, 388, 2025
4U55
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BU of 4u55 by Molmil
Crystal structure of Cryptopleurine bound to the yeast 80S ribosome
分子名称: (14aR)-2,3,6-trimethoxy-11,12,13,14,14a,15-hexahydro-9H-dibenzo[f,h]pyrido[1,2-b]isoquinoline, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
登録日2014-07-24
公開日2014-10-22
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
5HDC
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BU of 5hdc by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 100 fs to 400 fs Structure
分子名称: Photoactive yellow protein
著者Pande, K, Tenboer, J, Schmidt, M.
登録日2016-01-05
公開日2016-05-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
5HDD
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BU of 5hdd by Molmil
Femtosecond Structural Dynamics Drives the Trans/Cis Isomerization in Photoactive Yellow Protein: 800 fs to 1200 fs Structure
分子名称: Photoactive yellow protein
著者Pande, K, Tenboer, J, Schmidt, M.
登録日2016-01-05
公開日2016-05-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Science, 352, 2016
9H8B
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BU of 9h8b by Molmil
Ex vivo cannulae fiber structure of Pyrodictium abyssi
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CanX
著者Sleutel, M, Remaut, H.
登録日2024-10-28
公開日2024-12-18
最終更新日2025-01-22
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Donor Strand Complementation and Calcium Ion Coordination Drive the Chaperone-free Polymerization of Archaeal Cannulae.
Biorxiv, 2024
8J07
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BU of 8j07 by Molmil
96nm repeat of human respiratory doublet microtubule and associated axonemal complexes
分子名称: ACTA2, Axonemal dynein light intermediate polypeptide 1, Calaxin, ...
著者Gui, M, Brown, A.
登録日2023-04-09
公開日2023-07-26
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Axonemal structures reveal mechanoregulatory and disease mechanisms.
Nature, 618, 2023
4U4Z
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BU of 4u4z by Molmil
Crystal structure of Phyllanthoside bound to the yeast 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
登録日2014-07-24
公開日2014-10-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
4U4U
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BU of 4u4u by Molmil
Crystal structure of Lycorine bound to the yeast 80S ribosome
分子名称: (1S,2S,12bS,12cS)-2,4,5,7,12b,12c-hexahydro-1H-[1,3]dioxolo[4,5-j]pyrrolo[3,2,1-de]phenanthridine-1,2-diol, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M.
登録日2014-07-24
公開日2014-10-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the inhibition of the eukaryotic ribosome.
Nature, 513, 2014
8BD3
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BU of 8bd3 by Molmil
Cryo-EM structure of the Photosystem II - LHCII supercomplex from Chlorella ohadi
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R)-beta,beta-caroten-3-ol, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Fadeeva, M, Klaiman, D, Caspy, I, Nelson, N.
登録日2022-10-18
公開日2023-08-09
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Structure of Chlorella ohadii Photosystem II Reveals Protective Mechanisms against Environmental Stress.
Cells, 12, 2023
8SF7
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BU of 8sf7 by Molmil
48-nm doublet microtubule from Tetrahymena thermophila strain MEC17
分子名称: CFAM166A, CFAM166B, CFAM166C, ...
著者Black, C.S, Kubo, S, Yang, S.K, Bui, K.H.
登録日2023-04-10
公開日2024-05-22
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Effect of alpha-tubulin acetylation on the doublet microtubule structure.
Elife, 12, 2024
8UVR
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BU of 8uvr by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Killam, B.Y, Phelps, G.A, Lee, R.E, Polikanov, Y.S.
登録日2023-11-03
公開日2024-08-07
最終更新日2025-03-19
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Development of 2nd generation aminomethyl spectinomycins that overcome native efflux in Mycobacterium abscessus.
Proc.Natl.Acad.Sci.USA, 121, 2024
6GSJ
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BU of 6gsj by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Yusupov, M, Yusupova, G.
登録日2018-06-14
公開日2018-07-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
6GSK
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BU of 6gsk by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Yusupov, M, Yusupova, G.
登録日2018-06-14
公開日2018-07-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
8G3D
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BU of 8g3d by Molmil
48-nm doublet microtubule from Tetrahymena thermophila strain K40R
分子名称: B2B3_fMIP, B5B6_fMIP, CFAM166A, ...
著者Black, C.S, Kubo, S, Yang, S.K, Bui, K.H.
登録日2023-02-07
公開日2023-06-14
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins.
Nat Commun, 14, 2023
8G2Z
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BU of 8g2z by Molmil
48-nm doublet microtubule from Tetrahymena thermophila strain CU428
分子名称: B2B3_fMIP, B5B6_fMIP, CFAM166A, ...
著者Black, C.S, Kubo, S, Yang, S.K, Bui, K.H.
登録日2023-02-06
公開日2023-06-14
最終更新日2024-12-25
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins.
Nat Commun, 14, 2023
7Y4L
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BU of 7y4l by Molmil
PBS of PBS-PSII-PSI-LHCs from Porphyridium purpureum.
分子名称: Allophycocyanin alpha subunit, Allophycocyanin beta 18 subunit, Allophycocyanin beta subunit, ...
著者You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sun, S, Sui, S.F.
登録日2022-06-15
公開日2023-01-18
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Nature, 616, 2023
6GSL
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BU of 6gsl by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Yusupov, M, Yusupova, G.
登録日2018-06-14
公開日2018-07-04
最終更新日2025-03-19
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
6BOH
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BU of 6boh by Molmil
Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Korostelev, A.A.
登録日2017-11-20
公開日2018-05-23
最終更新日2025-03-19
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Conformational Control of Translation Termination on the 70S Ribosome.
Structure, 26, 2018
8BTK
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BU of 8btk by Molmil
Structure of the TRAP complex with the Sec translocon and a translating ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Jaskolowski, M, Jomaa, A, Gamerdinger, M, Shrestha, S, Leibundgut, M, Deuerling, E, Ban, N.
登録日2022-11-29
公開日2023-05-24
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis of the TRAP complex function in ER protein biogenesis.
Nat.Struct.Mol.Biol., 30, 2023
5CZP
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BU of 5czp by Molmil
70S termination complex containing E. coli RF2
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hoffer, E.D, Dunham, C.M.
登録日2015-07-31
公開日2016-10-12
最終更新日2025-03-19
実験手法X-RAY DIFFRACTION (3.29995918 Å)
主引用文献Uniformity of Peptide Release Is Maintained by Methylation of Release Factors.
Cell Rep, 17, 2016

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件を2025-07-09に公開中

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