PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

---

4B9L	Structure of the high fidelity DNA polymerase I with the oxidative formamidopyrimidine-dA DNA lesion in the pre-insertion site. 分子名称: 5'-D(*CP*AP*GP*FAX*AP*GP*AP*GP*TP*CP*AP*GP*GP*CP*TP)-3', 5'-D(*GP*CP*CP*TP*GP*AP*CP*TP*CP*TP)-3', DNA POLYMERASE I, ... 著者 Gehrke, T.H, Lischke, U, Arnold, S, Schneider, S, Carell, T. 登録日 2012-09-05 公開日 2013-04-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Unexpected Non-Hoogsteen-Based Mutagenicity Mechanism of Fapy-DNA Lesions. Nat.Chem.Biol., 9, 2013
4AZ2	Human thrombin - inhibitor complex 分子名称: (R)-N-((S)-1-CARBAMIMIDOYL-PIPERIDIN-3-YLMETHYL)-2-(NAPHTHALENE-2-SULFONYLAMINO)-3-PHENYL-PROPIONAMIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, HIRUDIN-3A', ... 著者 Banner, D.W, D'Arcy, A, Winkler, F.K, Hilpert, K. 登録日 2012-06-22 公開日 2012-08-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Design and Synthesis of Potent and Highly Selective Thrombin Inhibitors. J.Med.Chem., 37, 1994
293D	INTERACTION BETWEEN THE LEFT-HANDED Z-DNA AND POLYAMINE-2: THE CRYSTAL STRUCTURE OF THE D(CG)3 AND SPERMIDINE COMPLEX 分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION, SODIUM ION, ... 著者 Ohishi, H, Nakanishi, I, Inubushi, K, Van Der Marel, G.A, Van Boom, J.H, Rich, A, Wang, A.H.-J, Hakoshima, T, Tomita, K. 登録日 1996-10-09 公開日 1996-12-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Interaction between the left-handed Z-DNA and polyamine-2. The crystal structure of the d(CG)3 and spermidine complex. FEBS Lett., 391, 1996
4B2T	The crystal structures of the eukaryotic chaperonin CCT reveal its functional partitioning 分子名称: T-COMPLEX PROTEIN 1 SUBUNIT ALPHA, T-COMPLEX PROTEIN 1 SUBUNIT BETA, T-COMPLEX PROTEIN 1 SUBUNIT DELTA, ... 著者 Kalisman, N, Schroeder, G.F, Levitt, M. 登録日 2012-07-17 公開日 2013-03-20 最終更新日 2019-11-06 実験手法 X-RAY DIFFRACTION (5.5 Å) 主引用文献 The Crystal Structures of the Eukaryotic Chaperonin Cct Reveal its Functional Partitioning Structure, 21, 2013
4AWJ	pVHL:EloB:EloC complex, in complex with capped Hydroxyproline 分子名称: (4R)-1-acetyl-4-hydroxy-N-methyl-L-prolinamide, ACETATE ION, ACETIC ACID, ... 著者 Van Molle, I, Thomann, A, Buckley, D.L, So, E.C, Lang, S, Crews, C.M, Ciulli, A. 登録日 2012-06-04 公開日 2012-11-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Dissecting Fragment-Based Lead Discovery at the Von Hippel-Lindau Protein:Hypoxia Inducible Factor 1Alpha Protein-Protein Interface. Chem.Biol., 19, 2012
4AXV	Biochemical and structural characterization of the MpaA amidase as part of a conserved scavenging pathway for peptidoglycan derived peptides in gamma-proteobacteria 分子名称: 1,2-ETHANEDIOL, MPAA, ZINC ION 著者 Maqbool, A, Herve, M, Mengin-Lecreulx, D, Dodson, E, Wilkinson, A.J, Thomas, G.H. 登録日 2012-06-14 公開日 2012-09-26 最終更新日 2020-03-04 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Mpaa is a Murein-Tripeptide-Specific Zinc Carboxypeptidase that Functions as Part of a Catabolic Pathway for Peptidoglycan Derived Peptides in Gamma-Proteobacteria. Biochem.J., 448, 2012
2DVN	Structure of PH1917 protein with the complex of IMP from Pyrococcus horikoshii 分子名称: GLYCEROL, Hypothetical protein PH1917, INOSINIC ACID, ... 著者 Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2006-07-31 公開日 2007-09-04 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes J.Mol.Biol., 375, 2008
4B73	Discovery of an allosteric mechanism for the regulation of HCV NS3 protein function 分子名称: (2S)-4-amino-N-[(1R)-1-(4-chloro-2-fluoro-3-phenoxyphenyl)propyl]-4-oxobutan-2-aminium, NON-STRUCTURAL PROTEIN 4A, SERINE PROTEASE NS3 著者 Saalau-Bethell, S.M, Woodhead, A.J, Chessari, G, Carr, M.G, Coyle, J, Graham, B, Hiscock, S.D, Murray, C.W, Pathuri, P, Rich, S.J, Richardson, C.J, Williams, P.A, Jhoti, H. 登録日 2012-08-16 公開日 2012-10-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Discovery of an Allosteric Mechanism for the Regulation of Hcv Ns3 Protein Function. Nat.Chem.Biol., 8, 2012
2DW1	Crystal structure of VAP2 from Crotalus atrox venom (Form 2-2 crystal) 分子名称: 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, Catrocollastatin, ... 著者 Takeda, S, Igarashi, T, Araki, S. 登録日 2006-08-02 公開日 2007-07-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins Febs Lett., 581, 2007
5V34	Ethylene forming enzyme in complex with manganese, malic acid and L-arginine 分子名称: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ARGININE, D-MALATE, ... 著者 Fellner, M, Martinez, S, Hu, J, Hausinger, R.P. 登録日 2017-03-06 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist. J. Am. Chem. Soc., 139, 2017
5V3J	mouseZFP568-ZnF1-10 in complex with DNA 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (26-MER), MAGNESIUM ION, ... 著者 Patel, A, Cheng, X. 登録日 2017-03-07 公開日 2018-03-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.064 Å) 主引用文献 DNA Conformation Induces Adaptable Binding by Tandem Zinc Finger Proteins. Cell, 173, 2018
2DCQ	Fully automated NMR structure determination of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana 分子名称: Putative protein At4g01050 著者 Lopez-Mendez, B, Guntert, P. 登録日 2006-01-12 公開日 2006-10-17 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Automated protein structure determination from NMR spectra J.AM.CHEM.SOC., 128, 2006
5V5V	Complex of NLGN2 with MDGA1 Ig1-Ig2 分子名称: MAM domain-containing glycosylphosphatidylinositol anchor protein 1, Neuroligin-2 著者 Gangwar, S.P, Machius, M, Rudenko, G. 登録日 2017-03-15 公開日 2017-07-05 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (4.11 Å) 主引用文献 Molecular Mechanism of MDGA1: Regulation of Neuroligin 2:Neurexin Trans-synaptic Bridges. Neuron, 94, 2017
4B8V	Cladosporium fulvum LysM effector Ecp6 in complex with a beta-1,4- linked N-acetyl-D-glucosamine tetramer 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, ... 著者 Saleem-Batcha, R, Sanchez-Vallet, A, Hansen, G, Thomma, B.P.H.J, Mesters, J.R. 登録日 2012-08-30 公開日 2013-07-17 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Fungal Effector Ecp6 Outcompetes Host Immune Receptor for Chitin Binding Through Intrachain Lysm Dimerization Elife, 2, 2013
1ZV4	Structure of the Regulator of G-Protein Signaling 17 (RGSZ2) 分子名称: Regulator of G-protein signaling 17 著者 Schoch, G.A, Jansson, A, Elkins, J.M, Haroniti, A, Niesen, F.H, Bunkoczi, G, Lee, W.H, Turnbull, A.P, Yang, X, Sundstrom, M, Arrowsmith, C, Edwards, A, Marsden, B, Gileadi, O, Ball, L, von Delft, F, Doyle, D.A, Structural Genomics Consortium (SGC) 登録日 2005-06-01 公開日 2005-06-28 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural diversity in the RGS domain and its interaction with heterotrimeric G protein alpha-subunits. Proc.Natl.Acad.Sci.Usa, 105, 2008
4ATU	Human doublecortin N-DC repeat plus linker, and tubulin (2XRP) docked into an 8A cryo-EM map of doublecortin-stabilised microtubules reconstructed in absence of kinesin 分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, NEURONAL MIGRATION PROTEIN DOUBLECORTIN, ... 著者 Liu, J.S, Schubert, C.R, Fu, X, Fourniol, F.J, Jaiswal, J.K, Houdusse, A, Stultz, C.M, Moores, C.A, Walsh, C.A. 登録日 2012-05-09 公開日 2012-09-26 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (8.3 Å) 主引用文献 Molecular Basis for Specific Regulation of Neuronal Kinesin- 3 Motors by Doublecortin Family Proteins. Mol.Cell, 47, 2012
1ZVL	Rat Neuronal Nitric Oxide Synthase Oxygenase Domain complexed with natural substrate L-Arg. 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, Nitric-oxide synthase, ... 著者 Matter, H, Kumar, H.S, Fedorov, R, Frey, A, Kotsonis, P, Hartmann, E, Frohlich, L.G, Reif, A, Pfleiderer, W, Scheurer, P, Ghosh, D.K, Schlichting, I, Schmidt, H.H. 登録日 2005-06-02 公開日 2005-08-02 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural Analysis of Isoform-Specific Inhibitors Targeting the Tetrahydrobiopterin Binding Site of Human Nitric Oxide Synthases. J.Med.Chem., 48, 2005
2DFS	3-D structure of Myosin-V inhibited state 分子名称: Calmodulin, Myosin-5A 著者 Liu, J, Taylor, D.W, Krementsova, E.B, Trybus, K.M, Taylor, K.A. 登録日 2006-03-03 公開日 2006-04-25 最終更新日 2024-03-13 実験手法 ELECTRON CRYSTALLOGRAPHY (24 Å) 主引用文献 Three-dimensional structure of the myosin V inhibited state by cryoelectron tomography Nature, 442, 2006
4AW8	X-ray structure of ZinT from Salmonella enterica in complex with zinc ion and PEG 分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Metal-binding protein ZinT, SODIUM ION, ... 著者 Alaleona, F, Ilari, A, Battistoni, A, Petrarca, P, Chiancone, E. 登録日 2012-06-01 公開日 2013-06-19 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Salmonella Enterica Zint Structure, Zinc Affinity and Interaction with the High-Affinity Uptake Protein Znua Provide Insight Into the Management of Periplasmic Zinc. Biochim.Biophys.Acta, 1840, 2014
5V2U	Ethylene forming enzyme apo form 分子名称: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme 著者 Fellner, M, Martinez, S, Hu, J, Hausinger, R.P. 登録日 2017-03-06 公開日 2017-08-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.058 Å) 主引用文献 Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist. J. Am. Chem. Soc., 139, 2017
4AVU	Crystal structure of human tankyrase 2 in complex with 6(5H)- phenanthridinone 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ... 著者 Haikarainen, T, Narwal, M, Lehtio, L. 登録日 2012-05-29 公開日 2012-06-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Evaluation and Structural Basis for the Inhibition of Tankyrases by Parp Inhibitors Acs Med.Chem.Lett., 5, 2014
5V32	Ethylene forming enzyme in complex with manganese and malic acid 分子名称: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, D-MALATE, MANGANESE (II) ION 著者 Fellner, M, Martinez, S, Hu, J, Hausinger, R.P. 登録日 2017-03-06 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.486 Å) 主引用文献 Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist. J. Am. Chem. Soc., 139, 2017
2DJ2	The solution structure of the second thioredoxin domain of mouse Protein disulfide-isomerase A4 分子名称: Protein disulfide-isomerase A4 著者 Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2006-03-30 公開日 2006-09-30 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 The solution structure of the second thioredoxin domain of mouse Protein disulfide-isomerase A4 To be Published
5V4Q	Crystal Structure of human GGT1 in complex with DON 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5,5-dihydroxy-L-norleucine, CHLORIDE ION, ... 著者 Terzyan, S, Hanigan, M. 登録日 2017-03-10 公開日 2017-04-19 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of 6-diazo-5-oxo-norleucine-bound human gamma-glutamyl transpeptidase 1, a novel mechanism of inactivation. Protein Sci., 26, 2017
1ZZS	Bovine eNOS N368D single mutant with L-N(omega)-Nitroarginine-(4R)-Amino-L-Proline Amide Bound 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, GLYCEROL, ... 著者 Li, H, Flinspach, M.L, Igarashi, J, Jamal, J, Yang, W, Gomez-Vidal, J.A, Litzinger, E.A, Silverman, R.B, Poulos, T.L. 登録日 2005-06-14 公開日 2005-12-06 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Exploring the Binding Conformations of Bulkier Dipeptide Amide Inhibitors in Constitutive Nitric Oxide Synthases. Biochemistry, 44, 2005

<1179118011811182118311841185118611871188118911901191119211931194>