Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1TNQ
DownloadVisualize
BU of 1tnq by Molmil
STRUCTURES OF THE APO AND CALCIUM TROPONIN-C REGULATORY DOMAINS: THE MUSCLE CONTRACTION SWITCH
分子名称: CALCIUM ION, TROPONIN-C
著者Gagne, S.M, Sykes, B.D.
登録日1995-07-07
公開日1995-10-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the troponin C regulatory domains in the apo and calcium-saturated states.
Nat.Struct.Biol., 2, 1995
4V3Q
DownloadVisualize
BU of 4v3q by Molmil
Designed armadillo repeat protein with 4 internal repeats, 2nd generation C-cap and 3rd generation N-cap.
分子名称: CALCIUM ION, GLYCEROL, YIII_M4_AII
著者Reichen, C, Madhurantakam, C, Pluckthun, A, Mittl, P.
登録日2014-10-20
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of designed armadillo-repeat proteins show propagation of inter-repeat interface effects.
Acta Crystallogr D Struct Biol, 72, 2016
5XLY
DownloadVisualize
BU of 5xly by Molmil
Crystal structure of CheR1 in complex with c-di-GMP-bound MapZ
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Chemotaxis protein methyltransferase 1, Cyclic diguanosine monophosphate-binding protein PA4608
著者Yuan, Z, Zhu, Y, Gu, L.
登録日2017-05-12
公開日2017-08-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.763 Å)
主引用文献Structural basis for the regulation of chemotaxis by MapZ in the presence of c-di-GMP
Acta Crystallogr D Struct Biol, 73, 2017
1TXP
DownloadVisualize
BU of 1txp by Molmil
Heterogeneous Nuclear Ribonucleoprotein (hnRNP) C Oligomerization Domain Tetramer
分子名称: Heterogeneous Nuclear Ribonucleoprotein C protein
著者Whitson, S.R, Lestourgeon, W.M, Krezel, A.M.
登録日2004-07-06
公開日2005-06-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of the Symmetric Coiled Coil Tetramer Formed by the Oligomerization Domain of hnRNP C: Implications for Biological Function.
J.Mol.Biol., 350, 2005
4V3O
DownloadVisualize
BU of 4v3o by Molmil
Designed armadillo repeat protein with 5 internal repeats, 2nd generation C-cap and 3rd generation N-cap.
分子名称: ACETATE ION, CALCIUM ION, YIII_M5_AII
著者Reichen, C, Madhurantakam, C, Pluckthun, A, Mittl, P.
登録日2014-10-20
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of Designed Armadillo-Repeat Proteins Show Propagation of Inter-Repeat Interface Effects
Acta Crystallogr.,Sect.D, 72, 2016
8HWI
DownloadVisualize
BU of 8hwi by Molmil
Bacterial STING from Larkinella arboricola in complex with 3'3'-c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CD-NTase-associated protein 12
著者Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日2022-12-30
公開日2024-01-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
Nat Commun, 14, 2023
1L9J
DownloadVisualize
BU of 1l9j by Molmil
X-Ray Structure of the Cytochrome-c(2)-Photosynthetic Reaction Center Electron Transfer Complex from Rhodobacter sphaeroides in Type I Co-Crystals
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CHLORIDE ION, ...
著者Axelrod, H.L, Abresch, E.C, Okamura, M.Y, Yeh, A.P, Rees, D.C, Feher, G.
登録日2002-03-24
公開日2002-06-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献X-ray structure determination of the cytochrome c2: reaction center electron transfer complex from Rhodobacter sphaeroides.
J.Mol.Biol., 319, 2002
8HY9
DownloadVisualize
BU of 8hy9 by Molmil
Bacterial STING from Riemerella anatipestifer in complex with 3'3'-c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, CD-NTase-associated protein 12
著者Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
登録日2023-01-06
公開日2024-01-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.462 Å)
主引用文献Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
Nat Commun, 14, 2023
6LF6
DownloadVisualize
BU of 6lf6 by Molmil
Crystal structure of ZmCGTa in complex with UDP
分子名称: UDP-glycosyltransferase 708A6, URIDINE-5'-DIPHOSPHATE
著者Gao, H.M, Yun, C.H.
登録日2019-11-29
公開日2020-11-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.044 Å)
主引用文献Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants.
Proc.Natl.Acad.Sci.USA, 117, 2020
5KC1
DownloadVisualize
BU of 5kc1 by Molmil
Structure of the C-terminal dimerization domain of Atg38
分子名称: 1,2-ETHANEDIOL, AMMONIUM ION, Autophagy-related protein 38, ...
著者Ohashi, Y, Soler, N, Garcia-Ortegon, M, Zhang, L, Perisic, O, Masson, G.R, Johnson, C.M, Williams, R.J.
登録日2016-06-04
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization of Atg38 and NRBF2, a fifth subunit of the autophagic Vps34/PIK3C3 complex.
Autophagy, 12, 2016
6LG1
DownloadVisualize
BU of 6lg1 by Molmil
Crystal structure of LpCGTa in complex with UDP
分子名称: LpCGTa, URIDINE-5'-DIPHOSPHATE
著者Gao, H.M, Yun, C.H.
登録日2019-12-04
公開日2020-11-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.047 Å)
主引用文献Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants.
Proc.Natl.Acad.Sci.USA, 117, 2020
5XXZ
DownloadVisualize
BU of 5xxz by Molmil
Crystal structure of a serine protease from Streptococcus species
分子名称: CALCIUM ION, Chemokine protease C, SULFATE ION
著者Jobichen, C, Sivaraman, J.
登録日2017-07-05
公開日2018-08-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.085 Å)
主引用文献Structure of ScpC, a virulence protease fromStreptococcus pyogenes, reveals the functional domains and maturation mechanism.
Biochem. J., 475, 2018
6LFN
DownloadVisualize
BU of 6lfn by Molmil
Crystal structure of LpCGTb
分子名称: LpCGTb, PHOSPHATE ION
著者Gao, H.M, Yun, C.H.
登録日2019-12-03
公開日2020-11-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.395 Å)
主引用文献Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants.
Proc.Natl.Acad.Sci.USA, 117, 2020
8B4O
DownloadVisualize
BU of 8b4o by Molmil
Cryo-EM structure of cytochrome bd oxidase from C. glutamicum
分子名称: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Cytochrome BD ubiquinol oxidase subunit I, Cytochrome bd-type quinol oxidase subunit II, ...
著者Grund, T.N, Kusumoto, T, Michel, H, Sakamoto, J, Safarian, S.
登録日2022-09-20
公開日2022-12-28
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Cryo-EM structure of cytochrome bd oxidase from C. glutamicum
To be published
9L08
DownloadVisualize
BU of 9l08 by Molmil
Cyclic Trimer of Helix-Linked Cytochrome c555
分子名称: ACETIC ACID, Covalently Connected Cytochrome c555 trimer, DI(HYDROXYETHYL)ETHER, ...
著者Novientri, G, Mashima, T, Matsuura, H, Ogata, H, Hirota, S.
登録日2024-12-12
公開日2025-05-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Construction of a Cyclic Regular-Triangle Trimer of Cytochrome c 555 with a Central Hole Using Sortase A.
Chemistry, 31, 2025
5XT0
DownloadVisualize
BU of 5xt0 by Molmil
Crystal Structure of Transketolase in complex with TPP intermediate VIII from Pichia Stipitis
分子名称: 2-C-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium-2-yl}-6-O-phosphono-D-glucitol, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Li, T.L, Hsu, N.S, Wang, Y.L.
登録日2017-06-16
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Evidence of Diradicals Involved in the Yeast Transketolase Catalyzed Keto-Transferring Reactions.
Chembiochem, 19, 2018
3SLS
DownloadVisualize
BU of 3sls by Molmil
Crystal Structure of human MEK-1 kinase in complex with UCB1353770 and AMPPNP
分子名称: 2-[(2-fluoro-4-iodophenyl)amino]-5,5-dimethyl-8-oxo-N-[(3R)-piperidin-3-yl]-5,6,7,8-tetrahydro-4H-thieno[2,3-c]azepine-3-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, MAGNESIUM ION, ...
著者Meier, C, Ceska, T.A.
登録日2011-06-25
公開日2012-02-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering human MEK-1 for structural studies: A case study of combinatorial domain hunting.
J.Struct.Biol., 177, 2012
6YC7
DownloadVisualize
BU of 6yc7 by Molmil
Structure of adenylylated C. glutamicum GlnK
分子名称: ADENINE ARABINOSE-5'-PHOSPHATE, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Grau, F.C, Muller, Y.A.
登録日2020-03-18
公開日2021-03-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of adenylylated and unadenylylated P II protein GlnK from Corynebacterium glutamicum.
Acta Crystallogr D Struct Biol, 77, 2021
6T5S
DownloadVisualize
BU of 6t5s by Molmil
Apo form of C-type lysozyme from the upper gastrointestinal tract of Opisthocomus hoatzin
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C
著者Taylor, E.J, Skjot, M, Skov, L.K, Klausen, M, De Maria, L, Gippert, G.P, Turkenburg, J.P, Davies, G.J, Wilson, K.S.
登録日2019-10-17
公開日2019-11-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The C-Type Lysozyme from the upper Gastrointestinal Tract of Opisthocomus hoatzin, the Stinkbird.
Int J Mol Sci, 20, 2019
6Y1T
DownloadVisualize
BU of 6y1t by Molmil
The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with a Trp51 to S-Trp51 modification
分子名称: 1,2-ETHANEDIOL, Cytochrome c peroxidase, mitochondrial, ...
著者Ortmayer, M, Levy, C, Green, A.P.
登録日2020-02-13
公開日2021-06-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A Noncanonical Tryptophan Analogue Reveals an Active Site Hydrogen Bond Controlling Ferryl Reactivity in a Heme Peroxidase.
Jacs Au, 1, 2021
6Y2Y
DownloadVisualize
BU of 6y2y by Molmil
The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with Trp51 to S-Trp51 and Trp191Phe modifications
分子名称: 1,2-ETHANEDIOL, Cytochrome c peroxidase, mitochondrial, ...
著者Ortmayer, M, Levy, C, Green, A.P.
登録日2020-02-17
公開日2021-06-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Noncanonical Tryptophan Analogue Reveals an Active Site Hydrogen Bond Controlling Ferryl Reactivity in a Heme Peroxidase.
Jacs Au, 1, 2021
4UGU
DownloadVisualize
BU of 4ugu by Molmil
Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N'-(4-(((2S,4R)-4-(3-((C-thiophen-2-ylcarbonimidoyl)amino)phenoxy) pyrrolidin-2-yl)methoxy)phenyl)thiophene-2-carboximidamide
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, CHLORIDE ION, GLYCEROL, ...
著者Holden, J.K, Poulos, T.L.
登録日2015-03-22
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase.
Biochemistry, 54, 2015
6T6C
DownloadVisualize
BU of 6t6c by Molmil
Complex with chitin oligomer of C-type lysozyme from the upper gastrointestinal tract of Opisthocomus hoatzin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Lysozyme C
著者Taylor, E.J, Skjot, M, Skov, L.K, Klausen, M, De Maria, L, Gippert, G.P, Turkenburg, J.P, Davies, G.J, Wilson, K.S.
登録日2019-10-18
公開日2019-11-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The C-Type Lysozyme from the upper Gastrointestinal Tract of Opisthocomus hoatzin, the Stinkbird.
Int J Mol Sci, 20, 2019
7ZYW
DownloadVisualize
BU of 7zyw by Molmil
Crystal structure of T2R-TTL-PM534 complex
分子名称: (4R)-N-[(1R)-1-[4-(cyclopropylmethoxy)-6-oxidanylidene-pyran-2-yl]butyl]-4-methyl-2-[(E)-C-methyl-N-oxidanyl-carbonimidoyl]-5H-1,3-thiazole-4-carboxamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Oliva, M.A, Diaz, J.F, Cuevas, C.
登録日2022-05-25
公開日2023-11-29
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献PM534, an Optimized Target-Protein Interaction Strategy through the Colchicine Site of Tubulin.
J.Med.Chem., 67, 2024
5XQK
DownloadVisualize
BU of 5xqk by Molmil
Crystal Structure of Transketolase in complex with xylulose-5-phosphate from Pichia Stipitis
分子名称: 2-C-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thia zol-3-ium-2-yl}-5-O-phosphono-D-xylitol, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Li, T.L, Hsu, N.S, Wang, Y.L.
登録日2017-06-07
公開日2018-06-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Evidence of Diradicals Involved in the Yeast Transketolase Catalyzed Keto-Transferring Reactions.
Chembiochem, 19, 2018

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon