PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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3P27	Crystal structure of S. cerevisiae Hbs1 protein (GDP-bound form), a translational GTPase involved in RNA quality control pathways and interacting with Dom34/Pelota 分子名称: Elongation factor 1 alpha-like protein, GUANOSINE-5'-DIPHOSPHATE 著者 van den Elzen, A, Henri, J, Lazar, N, Gas, M.E, Durand, D, Lacroute, F, Nicaise, M, van Tilbeurgh, H, Sraphin, B, Graille, M, Paris-Sud Yeast Structural Genomics (YSG) 登録日 2010-10-01 公開日 2010-11-17 最終更新日 2012-03-14 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways. Nat.Struct.Mol.Biol., 17, 2010
6ZTO	E. coli 70S-RNAP expressome complex in uncoupled state 1 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-23 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
6ZTP	E. coli 70S-RNAP expressome complex in uncoupled state 6 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
7AE9	Crystal structure of mono-AMPylated HEPN(R46E) toxin in complex with MNT antitoxin 分子名称: 2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE, HEPN toxin, MNT ANTITOXIN 著者 Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V. 登録日 2020-09-17 公開日 2020-12-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation. Mol.Cell, 80, 2020
6ZTM	E. coli 70S-RNAP expressome complex in collided state without NusG 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
6ZTN	E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
7AE6	Crystal structure of di-AMPylated HEPN(R102A) toxin 分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, HEPN toxin 著者 Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V. 登録日 2020-09-17 公開日 2020-12-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation. Mol.Cell, 80, 2020
6ZTL	E. coli 70S-RNAP expressome complex in collided state bound to NusG 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
4APW	Alp12 filament structure 分子名称: ALP12 著者 Popp, D, Narita, A, Lee, L.J, Ghoshdastider, U, Xue, B, Srinivasan, R, Balasubramanian, M.K, Tanaka, T, Robinson, R.C. 登録日 2012-04-06 公開日 2012-05-16 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (19.700001 Å) 主引用文献 Novel Actin-Like Filament Structure from Clostridium Tetani. J.Biol.Chem., 287, 2012
7A5U	Structure of E37A BlaC from Mycobacterium tuberculosis 分子名称: Beta-lactamase 著者 Chikunova, A, Ahmad, M.U, Perrakis, A, Ubbink, M. 登録日 2020-08-21 公開日 2021-04-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Conserved residues Glu37 and Trp229 play an essential role in protein folding of beta-lactamase. Febs J., 288, 2021
6ZU1	E. coli 70S-RNAP expressome complex in uncoupled state 2 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-21 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
7AE8	Crystal structure of HEPN(R102A) toxin 分子名称: ACETATE ION, HEPN toxin 著者 Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V. 登録日 2020-09-17 公開日 2020-12-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation. Mol.Cell, 80, 2020
3PGE	Structure of sumoylated PCNA 分子名称: Proliferating cell nuclear antigen, SUMO-modified proliferating cell nuclear antigen 著者 Freudenthal, B.D, Brogie, J.E, Gakhar, L, Washington, T. 登録日 2010-11-01 公開日 2010-12-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal Structure of SUMO-Modified Proliferating Cell Nuclear Antigen. J.Mol.Biol., 406, 2011
7AER	Rebuilt and re-refined PDB entry 5yep: tri-AMPylated Shewanella oneidensis HEPN toxin in complex with MNT antitoxin 分子名称: ADENOSINE MONOPHOSPHATE, Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family 著者 Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V. 登録日 2020-09-18 公開日 2020-12-30 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation. Mol.Cell, 80, 2020
3TWZ	Phosphorylated Bacillus cereus phosphopentomutase in space group P212121 分子名称: MANGANESE (II) ION, Phosphopentomutase 著者 Panosian, T.P, Nanneman, D.P, Bachmann, B.O, Iverson, T.M. 登録日 2011-09-22 公開日 2012-02-29 最終更新日 2012-03-21 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase. Biochemistry, 51, 2012
3TX0	Unphosphorylated Bacillus cereus phosphopentomutase in a P212121 crystal form 分子名称: MANGANESE (II) ION, Phosphopentomutase 著者 Panosian, T.P, Nanneman, D.P, Bachmann, B.O, Iverson, T.M. 登録日 2011-09-22 公開日 2012-02-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase. Biochemistry, 51, 2012
3GPM	Structure of the trimeric form of the E113G PCNA mutant protein 分子名称: Proliferating cell nuclear antigen 著者 Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T. 登録日 2009-03-23 公開日 2009-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 A charged residue at the subunit interface of PCNA promotes trimer formation by destabilizing alternate subunit interactions. Acta Crystallogr.,Sect.D, 65, 2009
4BIN	Crystal structure of the E. coli N-acetylmuramoyl-L-alanine amidase AmiC 分子名称: N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMIC, SODIUM ION, ZINC ION 著者 Kerff, F, Rocaboy, M, Herman, R, Sauvage, E, Charlier, P. 登録日 2013-04-12 公開日 2013-08-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 The Crystal Structure of the Cell Division Amidase Amic Reveals the Fold of the Amin Domain, a New Peptidoglycan Binding Domain. Mol.Microbiol., 90, 2013
3P26	Crystal structure of S. cerevisiae Hbs1 protein (apo-form), a translational GTPase involved in RNA quality control pathways and interacting with Dom34/Pelota 分子名称: Elongation factor 1 alpha-like protein 著者 van den Elzen, A, Henri, J, Lazar, N, Gas, M.E, Durand, D, Lacroute, F, Nicaise, M, van Tilbeurgh, H, Sraphin, B, Graille, M, Paris-Sud Yeast Structural Genomics (YSG) 登録日 2010-10-01 公開日 2010-11-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways. Nat.Struct.Mol.Biol., 17, 2010
3UN3	phosphopentomutase T85Q variant soaked with glucose 1,6-bisphosphate 分子名称: 1,6-di-O-phosphono-alpha-D-glucopyranose, GLYCEROL, MANGANESE (II) ION, ... 著者 Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O. 登録日 2011-11-15 公開日 2012-02-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase. Biochemistry, 51, 2012
3GPN	Structure of the non-trimeric form of the E113G PCNA mutant protein 分子名称: Proliferating cell nuclear antigen 著者 Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T. 登録日 2009-03-23 公開日 2009-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A charged residue at the subunit interface of PCNA promotes trimer formation by destabilizing alternate subunit interactions. Acta Crystallogr.,Sect.D, 65, 2009
3UO0	phosphorylated Bacillus cereus phosphopentomutase soaked with glucose 1,6-bisphosphate 分子名称: 1,6-di-O-phosphono-alpha-D-glucopyranose, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, ... 著者 Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O. 登録日 2011-11-16 公開日 2012-02-29 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase. Biochemistry, 51, 2012
3UN5	Bacillus cereus phosphopentomutase T85E variant 分子名称: GLYCEROL, MANGANESE (II) ION, Phosphopentomutase 著者 Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O. 登録日 2011-11-15 公開日 2012-02-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase. Biochemistry, 51, 2012
3UN2	Phosphopentomutase T85Q variant enzyme 分子名称: GLYCEROL, MANGANESE (II) ION, Phosphopentomutase 著者 Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O. 登録日 2011-11-15 公開日 2012-02-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase. Biochemistry, 51, 2012
6PWN	MscS Nanodisc with N-terminal His-Tag 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, HEXADECANE, Small-conductance mechanosensitive channel 著者 Reddy, B.G, Perozo, E. 登録日 2019-07-23 公開日 2020-01-08 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Molecular basis of force-from-lipids gating in the mechanosensitive channel MscS. Elife, 8, 2019

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