PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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3F48	Crystal structure of LeuT bound to L-alanine and sodium 分子名称: ALANINE, SODIUM ION, Transporter, ... 著者 Singh, S.K, Piscitelli, C.L, Yamashita, A, Gouaux, E. 登録日 2008-10-31 公開日 2008-12-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A competitive inhibitor traps LeuT in an open-to-out conformation. Science, 322, 2008
3AYH	Crystal structure of the C17/25 subcomplex from S. pombe RNA Polymerase III 分子名称: DNA-directed RNA polymerase III subunit rpc8, DNA-directed RNA polymerase III subunit rpc9, SULFATE ION 著者 Ehara, H, Sekine, S, Yokoyama, S. 登録日 2011-05-06 公開日 2011-07-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.193 Å) 主引用文献 Crystal structure of the C17/25 subcomplex from Schizosaccharomyces pombe RNA polymerase III Protein Sci., 20, 2011
3F3A	Crystal Structure of LeuT bound to L-Tryptophan and Sodium 分子名称: SODIUM ION, TETRADECANE, TRYPTOPHAN, ... 著者 Singh, S.K, Piscitelli, C.L, Yamashita, A, Gouaux, E. 登録日 2008-10-30 公開日 2008-12-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A competitive inhibitor traps LeuT in an open-to-out conformation. Science, 322, 2008
3F3C	Crystal structure of LeuT bound to 4-Fluoro-L-Phenylalanine and sodium 分子名称: 4-FLUORO-L-PHENYLALANINE, SODIUM ION, Transporter, ... 著者 Singh, S.K, Piscitelli, C.L, Yamashita, A, Gouaux, E. 登録日 2008-10-30 公開日 2008-12-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A competitive inhibitor traps LeuT in an open-to-out conformation. Science, 322, 2008
3OAK	Crystal structure of a Spn1 (Iws1)-Spt6 complex 分子名称: Transcription elongation factor SPT6, Transcription factor IWS1 著者 McDonald, S.M, Close, D, Hill, C.P. 登録日 2010-08-05 公開日 2010-11-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure and biological importance of the spn1-spt6 interaction, and its regulatory role in nucleosome binding. Mol.Cell, 40, 2010
5WWN	Crystal structure of Tsr1 分子名称: Ribosome biogenesis protein TSR1, SULFATE ION 著者 Ye, K, Wang, B. 登録日 2017-01-03 公開日 2017-06-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.805 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome Elife, 6, 2017
5WXM	Crystal structure of the Imp3 and Mpp10 complex 分子名称: SULFATE ION, U3 small nucleolar RNA-associated protein MPP10, U3 small nucleolar ribonucleoprotein protein IMP3 著者 Ye, K, Zheng, S. 登録日 2017-01-07 公開日 2017-06-28 実験手法 X-RAY DIFFRACTION (2.304 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome Elife, 6, 2017
5WWO	Crystal structure of Enp1 分子名称: Essential nuclear protein 1, Protein LTV1 著者 Ye, K, Zhang, W. 登録日 2017-01-03 公開日 2017-06-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome Elife, 6, 2017
5WYL	Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices 分子名称: Putative uncharacterized protein 著者 Chen, R, Zhu, X, Ye, K. 登録日 2017-01-13 公開日 2017-06-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.638 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome Elife, 6, 2017
5WY3	Crystal structure of Chaetomium thermophilum Utp10 middle domain 分子名称: Putative uncharacterized protein 著者 Chen, R, Zhu, X, Ye, K. 登録日 2017-01-10 公開日 2017-06-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome Elife, 6, 2017
6NJY	Type IV CRISPR associated RNA endonuclease Cas6 - apo form 分子名称: SULFATE ION, Type IV CRISPR associated Cas6 RNA endonuclease, beta-D-glucopyranose 著者 Jackson, R.N, Warner, E, Olsen, K.J. 登録日 2019-01-04 公開日 2019-07-10 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural basis of Type IV CRISPR RNA biogenesis by a Cas6 endoribonuclease. Rna Biol., 16, 2019
4OJJ	Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator (Space group : P212121) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA topoisomerase 2-associated protein PAT1, ... 著者 Fourati-Kammoun, Z, Kolesnikova, O, Back, R, Keller, J, Lazar, N, Gaudon-Plesse, C, Seraphin, B, Graille, M. 登録日 2014-01-21 公開日 2014-10-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 The C-terminal domain from S. cerevisiae Pat1 displays two conserved regions involved in decapping factor recruitment. Plos One, 9, 2014
4OGP	Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator (Space group : P21) 分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA topoisomerase 2-associated protein PAT1 著者 Fourati-Kammoun, Z, Kolesnikova, O, Back, R, Keller, J, Lazar, N, Gaudon-Plesse, C, Seraphin, B, Graille, M. 登録日 2014-01-16 公開日 2014-10-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The C-terminal domain from S. cerevisiae Pat1 displays two conserved regions involved in decapping factor recruitment. Plos One, 9, 2014
8CQR	Cryo-EM structure of the NINJ1 filament 分子名称: Ninjurin-1 著者 Degen, M.D, Hiller, S.H, Maier, T.M. 登録日 2023-03-07 公開日 2023-05-17 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of NINJ1-mediated plasma membrane rupture in cell death. Nature, 618, 2023
7U07	Crystal structure of queuine salvage enzyme DUF2419, apo form 分子名称: Queuine salvage enzyme DUF2419 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-02-17 公開日 2022-12-21 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
7U91	Crystal structure of queuine salvage enzyme DUF2419, in complex with queuosine-5'-monophosphate 分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-(5-O-phosphono-beta-D-ribofuranosyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, AMMONIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-03-09 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
7U1O	Crystal structure of queuine salvage enzyme DUF2419 complexed with queuosine 分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-beta-D-ribofuranosyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, DI(HYDROXYETHYL)ETHER, MALONATE ION, ... 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-02-21 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
7U5A	Crystal structure of queuine salvage enzyme DUF2419 mutant K199C, complexed with queuosine 分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-beta-D-ribofuranosyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, MALONATE ION, Queuine salvage enzyme DUF2419 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-03-01 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
8UIN	Structure of the C3bBb-albicin complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Albicin, ... 著者 Andersen, J.F, Lei, H. 登録日 2023-10-10 公開日 2024-05-08 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.86 Å) 主引用文献 Mechanism of complement inhibition by a mosquito protein revealed through cryo-EM. Commun Biol, 7, 2024
7UGK	Crystal structure of the human queuine salvage enzyme DUF2419, wild-type apo form 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Queuosine salvage protein DUF2419 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-03-24 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
7UK3	Crystal structure of queuine salvage enzyme DUF2419, wild-type (non-His6x tagged) 分子名称: Queuosine salvage protein DUF2419 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-03-31 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
7ULC	Crystal structure of queuine salvage enzyme DUF2419 mutant D231N, in complex with queuosine-5'-monophosphate 分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-(5-O-phosphono-beta-D-ribofuranosyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, DI(HYDROXYETHYL)ETHER, Queuosine salvage protein DUF2419 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-04-04 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
8DL3	Crystal structure of the human queuine salvage enzyme DUF2419, complexed with queuine 分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, Queuosine salvage protein 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-07-06 公開日 2022-12-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate. Nucleic Acids Res., 51, 2023
7VBA	Structure of the pre state human RNA Polymerase I Elongation Complex 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3'), ... 著者 Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y. 登録日 2021-08-31 公開日 2022-02-16 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Structure of the human RNA polymerase I elongation complex. Cell Discov, 7, 2021
7VBC	Back track state of human RNA Polymerase I Elongation Complex 分子名称: DNA (5'-D(*GP*TP*AP*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*G)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*AP*GP*CP*GP*TP*GP*TP*CP*AP*GP*CP*AP*AP*TP*A)-3'), DNA-directed RNA polymerase I subunit RPA1, ... 著者 Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y. 登録日 2021-08-31 公開日 2022-02-16 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.01 Å) 主引用文献 Structure of the human RNA polymerase I elongation complex. Cell Discov, 7, 2021

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