PDB: 359 件ウェブページステータス検索Chemie searchBIRD

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4X31	Room temperature structure of bacteriorhodopsin from lipidic cubic phase obtained with serial millisecond crystallography using synchrotron radiation 分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL 著者 Nogly, P, James, D, Wang, D, White, T, Zatsepin, N, Shilova, A, Nelson, G, Liu, H, Johansson, L, Heymann, M, Jaeger, K, Metz, M, Wickstrand, C, Wu, W, Baath, P, Berntsen, P, Oberthuer, D, Panneels, V, Cherezov, V, Chapman, H, Spence, J, Schertler, G, Neutze, R, Moraes, I, Burghammer, M, Standfuss, J, Weierstall, U. 登録日 2014-11-27 公開日 2015-02-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Lipidic cubic phase serial millisecond crystallography using synchrotron radiation. Iucrj, 2, 2015
4PXK	Crystal structure of Haloarcula marismortui bacteriorhodopsin I D94N mutant 分子名称: Bacteriorhodopsin, EICOSANE, RETINAL, ... 著者 Shevchenko, V, Gushchin, I, Polovinkin, V, Gordeliy, V. 登録日 2014-03-24 公開日 2014-12-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of Escherichia coli-Expressed Haloarcula marismortui Bacteriorhodopsin I in the Trimeric Form. Plos One, 9, 2014
3WQJ	Crystal structure of archaerhodopsin-2 at 1.8 angstrom resolution 分子名称: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, ... 著者 Kouyama, T. 登録日 2014-01-27 公開日 2014-10-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of archaerhodopsin-2 at 1.8 angstrom resolution. Acta Crystallogr.,Sect.D, 70, 2014
4MD1	Orange species of bacteriorhodopsin from Halobacterium salinarum 分子名称: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ... 著者 Borshchevskiy, V, Erofeev, I, Round, E, Weik, M, Ishchenko, A, Gushchin, I, Mishin, A, Bueldt, G, Gordeliy, V. 登録日 2013-08-22 公開日 2014-10-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Low-dose X-ray radiation induces structural alterations in proteins. Acta Crystallogr.,Sect.D, 70, 2014
4MD2	Ground state of bacteriorhodopsin from Halobacterium salinarum 分子名称: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ... 著者 Borshchevskiy, V, Erofeev, I, Round, E, Weik, M, Ishchenko, A, Gushchin, I, Mishin, A, Bueldt, G, Gordeliy, V. 登録日 2013-08-22 公開日 2014-10-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Low-dose X-ray radiation induces structural alterations in proteins. Acta Crystallogr.,Sect.D, 70, 2014
4OV0	Structure of Bacteriorhdopsin Transferred from Amphipol A8-35 to a Lipidic Mesophase 分子名称: Bacteriorhodopsin, RETINAL 著者 Polovinkin, V, Gushchin, I, Sintsov, M, Round, E, Balandin, T, Chervakov, P, Schevchenko, V, Utrobin, P, Popov, A, Borshchevskiy, V, Mishin, A, Kuklin, A, Willbold, D, Popot, J.L, Gordeliy, V. 登録日 2014-02-19 公開日 2014-10-01 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase. J.Membr.Biol., 247, 2014
4TL3	Mechanistic insights from the crystal structure of an inward proton-transporting Anabaena sensory rhodopsin mutant 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Anabaena sensory rhodopsin, RETINAL 著者 Dong, B.H, Luecke, H. 登録日 2014-05-29 公開日 2014-07-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Mechanistic insights from the crystal structure of an inward proton-transportingAnabaena sensory rhodopsin mutant To Be Published
4L35	Crystal structure of cruxrhodopsin-3 at pH5 from Haloarcula vallismortis at 2.1 angstrom resolution 分子名称: BACTERIORUBERIN, Cruxrhodopsin-3, RETINAL 著者 Kouyama, T, Chan, S.K. 登録日 2013-06-05 公開日 2014-06-11 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of Cruxrhodopsin-3 from Haloarcula vallismortis Plos One, 9, 2014
4JR8	Crystal structure of cruxrhodopsin-3 from Haloarcula vallismortis at 2.3 angstrom resolution 分子名称: BACTERIORUBERIN, Cruxrhodopsin-3, RETINAL 著者 Kouyama, T, Chan, S.K. 登録日 2013-03-21 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of Cruxrhodopsin-3 from Haloarcula vallismortis Plos One, 9, 2014
2M3G	Structure of Anabaena Sensory Rhodopsin Determined by Solid State NMR Spectroscopy 分子名称: Anabaena Sensory Rhodopsin, RETINAL 著者 Wang, S, Munro, R.A, Shi, L, Kawamura, I, Okitsu, T, Wada, A, Kim, S, Jung, K, Brown, L.S, Ladizhansky, V. 登録日 2013-01-17 公開日 2013-08-21 最終更新日 2023-06-14 実験手法 SOLID-STATE NMR 主引用文献 Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein. Nat.Methods, 10, 2013
4HYJ	Crystal structure of Exiguobacterium sibiricum rhodopsin 分子名称: EICOSANE, RETINAL, Rhodopsin 著者 Gushchin, I, Chervakov, P, Kuzmichev, P, Popov, A, Round, E, Borshchevskiy, V, Dolgikh, D, Kirpichnikov, M, Petrovskaya, L, Chupin, V, Arseniev, A, Gordeliy, V. 登録日 2012-11-13 公開日 2013-07-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural insights into the proton pumping by unusual proteorhodopsin from nonmarine bacteria. Proc.Natl.Acad.Sci.USA, 110, 2013
3VVK	An M-like Reaction State of the azide-bound purple form of pharaonis halorhodopsin 分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, AZIDE ION, BACTERIORUBERIN, ... 著者 Kouyama, T, Nakanishi, T. 登録日 2012-07-26 公開日 2013-06-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Large deformation of helix F during the photoreaction cycle of Pharaonis halorhodopsin in complex with azide Biophys.J., 104, 2013
4KNF	Crystal structure of a blue-light absorbing proteorhodopsin double-mutant D97N/Q105L from HOT75 分子名称: Blue-light absorbing proteorhodopsin, RETINAL 著者 Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H. 登録日 2013-05-09 公開日 2013-06-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes. Acta Crystallogr.,Sect.D, 69, 2013
4KLY	Crystal structure of a blue-light absorbing proteorhodopsin mutant D97N from HOT75 分子名称: Blue-light absorbing proteorhodopsin, RETINAL 著者 Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H. 登録日 2013-05-07 公開日 2013-06-05 最終更新日 2013-10-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes. Acta Crystallogr.,Sect.D, 69, 2013
4FBZ	Crystal structure of deltarhodopsin from Haloterrigena thermotolerans 分子名称: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, BACTERIORUBERIN, ... 著者 Kouyama, T. 登録日 2012-05-23 公開日 2013-05-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of deltarhodopsin-3 from Haloterrigena thermotolerans Proteins, 81, 2013
4GYC	Structure of the SRII(D75N mutant)/HtrII Complex in I212121 space group ("U" shape) 分子名称: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ... 著者 Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V. 登録日 2012-09-05 公開日 2013-05-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.0501 Å) 主引用文献 Ground state structure of D75N mutant of sensory rhodopsin II in complex with its cognate transducer. J Photochem Photobiol B, 123C, 2013
4JQ6	Crystal structure of blue light-absorbing proteorhodopsin from Med12 at 2.3 Angstrom 分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Proteorhodopsin, RETINAL 著者 Ozorowski, G, Luecke, H. 登録日 2013-03-20 公開日 2013-05-08 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes. Acta Crystallogr.,Sect.D, 69, 2013
4HYX	Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-4 DMPC Bicelle 分子名称: Bacteriorhodopsin, DECANE, GLYCEROL, ... 著者 Lee, S, Stout, C.D, Zhang, Q. 登録日 2012-11-14 公開日 2013-03-20 最終更新日 2013-05-22 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins. Proc.Natl.Acad.Sci.USA, 110, 2013
4HWL	Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-7 DMPC Bicelle 分子名称: Bacteriorhodopsin, GLYCEROL, HEPTANE, ... 著者 Lee, S, Stout, C.D, Zhang, Q. 登録日 2012-11-08 公開日 2013-03-20 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins. Proc.Natl.Acad.Sci.USA, 110, 2013
4FPD	Deprotonation of D96 in bacteriorhodopsin opens the proton uptake pathway 分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, CHLORIDE ION, ... 著者 Wang, T, Sessions, A.O, Lunde, C.S, Rouani, S, Glaeser, R.M, Facciotti, M.T, Duan, Y. 登録日 2012-06-22 公開日 2013-02-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Deprotonation of d96 in bacteriorhodopsin opens the proton uptake pathway. Structure, 21, 2013
3VHZ	Crystal structure of the trans isomer of the L93A mutant of bacteriorhodopsin 分子名称: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ... 著者 Kouyama, T, Zhang, J. 登録日 2011-09-13 公開日 2012-06-13 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin Proteins, 80, 2012
3VI0	Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin 分子名称: 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, Bacteriorhodopsin, ... 著者 Kouyama, T, Zhang, J. 登録日 2011-09-13 公開日 2012-06-13 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the O intermediate of the Leu93Ala mutant of bacteriorhodopsin Proteins, 80, 2012
3UTX	Crystal structure of bacteriorhodopsin mutant T46A 分子名称: Bacteriorhodopsin, DODECANE, RETINAL 著者 Cao, Z, Bowie, J.U. 登録日 2011-11-27 公開日 2012-05-09 最終更新日 2014-07-16 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Shifting hydrogen bonds may produce flexible transmembrane helices. Proc.Natl.Acad.Sci.USA, 109, 2012
3UTY	Crystal structure of bacteriorhodopsin mutant P50A/T46A 分子名称: Bacteriorhodopsin, DODECANE, RETINAL 著者 Cao, Z, Bowie, J.U. 登録日 2011-11-27 公開日 2012-05-09 最終更新日 2014-07-16 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Shifting hydrogen bonds may produce flexible transmembrane helices. Proc.Natl.Acad.Sci.USA, 109, 2012
3UTW	Crystal structure of bacteriorhodopsin mutant P50A/Y57F 分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Bacteriorhodopsin, RETINAL, ... 著者 Cao, Z, Bowie, J.U. 登録日 2011-11-27 公開日 2012-05-09 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Shifting hydrogen bonds may produce flexible transmembrane helices. Proc.Natl.Acad.Sci.USA, 109, 2012

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