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PDB: 276 件

4Y59
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Crystal structure of ALiS1-Streptavidin complex
分子名称: 2-[3-(trifluoromethyl)phenyl]furo[3,2-c]pyridin-4(5H)-one, Streptavidin
著者Sugiyama, S, Terai, T, Kohno, M, Ishida, H, Nagano, T.
登録日2015-02-11
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Artificial Ligands of Streptavidin (ALiS): Discovery, Characterization, and Application for Reversible Control of Intracellular Protein Transport
J.Am.Chem.Soc., 137, 2015
3T6F
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Biotin complex of Y54F core streptavidin
分子名称: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
著者Baugh, L, Le Trong, I, Cerutti, D.S, Mehta, N, Gulich, S, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
登録日2011-07-28
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
5N89
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CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE GNSFDDWLASKG
分子名称: GLY-ASN-SER-PHE-ASP-ASP-TRP-LEU-ALA-SER-LYS-GLY-NH2, GLYCEROL, Streptavidin
著者Lyamichev, V, Goodrich, L, Sullivan, E, Bannen, R, Benz, J, Albert, T, Patel, J.
登録日2017-02-23
公開日2017-10-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Stepwise Evolution Improves Identification of Diverse Peptides Binding to a Protein Target.
Sci Rep, 7, 2017
7NLV
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WILDTYPE CORE-STREPTAVIDIN WITH a conjugated BIOTINYLATED PYRROLIDINE II
分子名称: 5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide, Streptavidin
著者Nodling, A.R, Santi, N, Tsai, Y.H, Rizkallah, P, Luk, L.Y.P, Jin, Y.
登録日2021-02-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献The role of streptavidin and its variants in catalysis by biotinylated secondary amines.
Org.Biomol.Chem., 19, 2021
2IZJ
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STREPTAVIDIN-BIOTIN PH 3.50 I4122 STRUCTURE
分子名称: BIOTIN, STREPTAVIDIN
著者Katz, B.A.
登録日1997-08-13
公開日1998-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH.
J.Mol.Biol., 274, 1997
2IZK
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STREPTAVIDIN-GLYCOLURIL PH 2.58 I4122 COMPLEX
分子名称: ACETATE ION, GLYCOLURIL, STREPTAVIDIN, ...
著者Katz, B.A.
登録日1997-08-13
公開日1998-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH.
J.Mol.Biol., 274, 1997
6VOZ
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BU of 6voz by Molmil
Artificial Metalloproteins with Dinuclear Iron Centers
分子名称: ACETATE ION, Streptavidin, {N-(4-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}butyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}iron(3+)
著者Miller, K.R, Follmer, A.H, Jasniewski, A.J, Sabuncu, S, Biswas, S, Albert, T, Hendrich, M.P, Moenne-Loccoz, P, Borovik, A.S.
登録日2020-02-01
公開日2021-02-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.
J.Am.Chem.Soc., 143, 2021
6VJL
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Streptavidin mutant M112 (G26C/A46C)
分子名称: BIOTIN, Streptavidin
著者Marangoni, J.M, Wu, S.C, Fogen, D, Wong, S.L, Ng, K.K.S.
登録日2020-01-16
公開日2020-12-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Engineering a disulfide-gated switch in streptavidin enables reversible binding without sacrificing binding affinity.
Sci Rep, 10, 2020
6T1E
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BU of 6t1e by Molmil
Streptavidin variants harbouring an artificial organocatalyst based cofactor
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide, ACETATE ION, CHLORIDE ION, ...
著者Lechner, H, Hocker, B.
登録日2019-10-04
公開日2020-10-14
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Chembiochem, 22, 2021
3T6L
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Y54F mutant of core streptavidin
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Streptavidin
著者Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
登録日2011-07-28
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3X00
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BU of 3x00 by Molmil
Crystal structure of the core streptavidin mutant V212 (Y22S/N23D/S27D/S45N/Y83S/R84K/E101D/R103K/E116N) complexed with bis iminobiotin long tail (Bis-IMNtail) at 1.3 A resolution
分子名称: 6-({5-[(2E,3aS,4S,6aR)-2-iminohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid, ETHANE-1,2-DIAMINE, Streptavidin
著者Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
登録日2014-10-09
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure-based design and synthesis of a bivalent iminobiotin analog showing strong affinity toward a low immunogenic streptavidin mutant.
Biosci.Biotechnol.Biochem., 79, 2015
3MG5
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Core-streptavidin mutant F130L in complex with biotin
分子名称: BIOTIN, GLYCEROL, Streptavidin
著者Le Trong, I, Baugh, L, Stayton, P.S, Lybrand, T.P, Stenkamp, R.E.
登録日2010-04-05
公開日2010-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A distal point mutation in the streptavidin-biotin complex preserves structure but diminishes binding affinity: experimental evidence of electronic polarization effects?
Biochemistry, 49, 2010
3WYP
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Crystal structure of wild-type core streptavidin in complex with D-biotin/biotin-D-sulfoxide at 1.3 A resolution
分子名称: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
著者Kawato, T, Mizohata, E, Meshizuka, T, Doi, H, Kawamura, T, Matsumura, H, Yumura, K, Tsumoto, K, Kodama, T, Inoue, T, Sugiyama, A.
登録日2014-09-05
公開日2014-12-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of streptavidin mutant with low immunogenicity.
J.Biosci.Bioeng., 119, 2015
3WZN
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BU of 3wzn by Molmil
Crystal structure of the core streptavidin mutant V21 (Y22S/N23D/S27D/Y83S/R84K/E101D/R103K/E116N) complexed with biotin at 1.3 A resolution
分子名称: BIOTIN, SULFATE ION, Streptavidin
著者Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Tsumoto, K, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
登録日2014-10-01
公開日2015-02-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure-based design of a streptavidin mutant specific for an artificial biotin analogue.
J.Biochem., 157, 2015
2RTM
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STREPTAVIDIN-2-IMINOBIOTIN-SULFATE COMPLEX, PH 3.50, SPACE GROUP I4122
分子名称: 2-IMINOBIOTIN, STREPTAVIDIN, SULFATE ION
著者Katz, B.A.
登録日1997-09-11
公開日1998-10-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH.
J.Mol.Biol., 274, 1997
6Y34
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Streptavidin wildtype with a biotC5-1 cofactor - an artificial iron hydroxylase
分子名称: GLYCEROL, Streptavidin, biotC5-1 cofactor
著者Serrano-Plana, J, Rumo, C, Rebelein, J.G, Peterson, R.L, Barnet, M, Ward, T.R.
登録日2020-02-17
公開日2020-07-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.307 Å)
主引用文献Enantioselective Hydroxylation of Benzylic C(sp3)-H Bonds by an Artificial Iron Hydroxylase Based on the Biotin-Streptavidin Technology.
J.Am.Chem.Soc., 142, 2020
6UIU
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BU of 6uiu by Molmil
Artificial Iron Proteins: Modelling the Active Sites in Non-Heme Dioxygenases
分子名称: N-(2-{bis[(pyridin-2-yl)methyl]amino}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide, Streptavidin
著者Miller, K.R, Paretsky, J.D, Follmer, A.H, Heinisch, T, Mittra, K, Gul, S, Kim, I.-S, Fuller, F.D, Batyuk, A, Sutherlin, K.D, Brewster, A.S, Bhowmick, A, Sauter, N.K, Kern, J, Yano, J, Green, M.T, Ward, T.R, Borovik, A.S.
登録日2019-10-01
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Artificial Iron Proteins: Modeling the Active Sites in Non-Heme Dioxygenases.
Inorg.Chem., 59, 2020
6T2Z
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Streptavidin variants harbouring an artificial organocatalyst based cofactor
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide, Streptavidin
著者Lechner, H, Hocker, B.
登録日2019-10-10
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Chembiochem, 22, 2021
6T31
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BU of 6t31 by Molmil
Streptavidin variants harbouring an artificial organocatalyst based cofactor
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide, Streptavidin
著者Lechner, H, Hocker, B.
登録日2019-10-10
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Chembiochem, 22, 2021
7KNL
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BU of 7knl by Molmil
Artificial Metalloproteins with Dinuclear Iron Centers
分子名称: Streptavidin
著者Miller, K.R, Follmer, A.H, Jasniewski, A.J, Sabuncu, S, Biswas, S, Albert, T, Biswas, A, Hendrich, M.P, Moenne-Loccoz, P, Borovik, A.S.
登録日2020-11-04
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.
J.Am.Chem.Soc., 143, 2021
4YVB
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BU of 4yvb by Molmil
Structure of D128N streptavidin
分子名称: BIOTIN, Streptavidin
著者Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
登録日2015-03-19
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.351 Å)
主引用文献A Streptavidin Binding Site Mutation Yields an Unexpected Result
To Be Published
6AUE
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BU of 6aue by Molmil
Artificial Metalloproteins Containing a Co4O4 Active Site - 2xm-S112Y-b
分子名称: N-biotin-C-Co4(mu3-O)4(OAc)(Py)4(H2O)3-beta-alanine, Streptavidin
著者Olshansky, L, Vallapurakal, J, Huerta-Lavorie, R, Nguyen, A.I, Tilley, T.D, Borovik, A.S.
登録日2017-08-31
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Artificial Metalloproteins Containing Co
J. Am. Chem. Soc., 140, 2018
2IZH
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STREPTAVIDIN-BIOTIN PH 10.44 I222 COMPLEX
分子名称: BIOTIN, STREPTAVIDIN
著者Katz, B.A.
登録日1997-08-13
公開日1998-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH.
J.Mol.Biol., 274, 1997
6AUL
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BU of 6aul by Molmil
Artificial Metalloproteins Containing a Co4O4 Active Site - 2xm-S112Y-b
分子名称: BIOTIN, Streptavidin
著者Olshansky, L, Vallapurakal, J, Huerta-Lavorie, R, Nguyen, A.I, Tilley, T.D, Borovik, A.S.
登録日2017-09-01
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Artificial Metalloproteins Containing Co
J. Am. Chem. Soc., 140, 2018
2IZG
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BU of 2izg by Molmil
STREPTAVIDIN-BIOTIN PH 2.0 I222 COMPLEX
分子名称: BIOTIN, STREPTAVIDIN, SULFATE ION
著者Katz, B.A.
登録日1997-08-13
公開日1998-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH.
J.Mol.Biol., 274, 1997

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