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PDB: 31 件

1OK7
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A Conserved protein binding-site on Bacterial Sliding Clamps
分子名称: DNA POLYMERASE III, DNA POLYMERASE IV
著者Burnouf, D.Y, Olieric, V, Wagner, J, Fujii, S, Reinbolt, J, Fuchs, R.P.P, Dumas, P.
登録日2003-07-18
公開日2004-07-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and Biochemical Analysis of Sliding Clamp/Ligand Interactions Suggest a Competition between Replicative and Translesion DNA Polymerases
J.Mol.Biol., 335, 2004
5YUY
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BU of 5yuy by Molmil
DNA polymerase IV - DNA ternary complex 9
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YUZ
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DNA polymerase IV - DNA ternary complex 11
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction.
Nucleic Acids Res., 46, 2018
5YUU
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DNA polymerase IV - DNA ternary complex 4
分子名称: DNA polymerase IV, DTN1, DTN2, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2019-01-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YV2
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DNA polymerase IV - DNA ternary complex 14
分子名称: DNA polymerase IV, DTN1, DTN2, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
1UNN
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BU of 1unn by Molmil
Complex of beta-clamp processivity factor and little finger domain of PolIV
分子名称: DNA POLYMERASE III BETA SUBUNIT, DNA POLYMERASE IV, SULFATE ION
著者Bunting, K.A, Roe, S.M, Pearl, L.H.
登録日2003-09-11
公開日2003-11-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for Recruitment of Translesion DNA Polymerase Pol Iv/Dinb to the Beta-Clamp
Embo J., 22, 2003
5YUS
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DNA polymerase IV - DNA ternary complex 2
分子名称: DNA polymerase IV, DTN, MAGNESIUM ION, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-11-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
6IG1
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BU of 6ig1 by Molmil
DNA polymerase IV - DNA ternary complex 10
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN3, ...
著者Kottur, J, Nair, D.T.
登録日2018-09-21
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction.
Nucleic Acids Res., 46, 2018
5YV3
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DNA polymerase IV - DNA ternary complex 7
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-11-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YUR
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DNA polymerase IV - DNA ternary complex 1
分子名称: DNA polymerase IV, DTN, SODIUM ION, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.035 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YUX
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BU of 5yux by Molmil
DNA polymerase IV - DNA ternary complex 8
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YYD
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BU of 5yyd by Molmil
DNA polymerase IV - ternary complex 15
分子名称: 5'-O-[hydroxy{[hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]thymidine, DNA polymerase IV, DTN2, ...
著者Kottur, J, Nair, D.T.
登録日2017-12-08
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YUV
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BU of 5yuv by Molmil
DNA polymerase IV - DNA ternary complex 5
分子名称: DNA polymerase IV, DTN1, DTN2, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-10-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YV1
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BU of 5yv1 by Molmil
DNA polymerase IV - DNA ternary complex 13
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YV0
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BU of 5yv0 by Molmil
DNA polymerase IV - DNA ternary complex 12
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction.
Nucleic Acids Res., 46, 2018
5C5J
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BU of 5c5j by Molmil
Poymerase Nucleotide complex
分子名称: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase IV, ...
著者Nair, D.T, Kottur, J.
登録日2015-06-20
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Reactive Oxygen Species Play an Important Role in the Bactericidal Activity of Quinolone Antibiotics
Angew.Chem.Int.Ed.Engl., 55, 2016
5YUW
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BU of 5yuw by Molmil
DNA polymerase IV - DNA ternary complex 6
分子名称: DNA polymerase IV, DTN1, DTN2C, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-11-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.124 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
5YUT
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BU of 5yut by Molmil
DNA polymerase IV - DNA ternary complex 3
分子名称: DNA polymerase IV, DTN, MAGNESIUM ION, ...
著者Kottur, J, Nair, D.T.
登録日2017-11-23
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
4Q45
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BU of 4q45 by Molmil
DNA Polymerase- damaged DNA complex
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*TP*CP*TP*A*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA (5'-D(*TP*CP*TP*AP*GP*GP*(RDG)P*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Kottur, J, Sharma, A, Nair, D.T.
登録日2014-04-13
公開日2015-05-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.176 Å)
主引用文献Unique structural features in DNA polymerase IV enable efficient bypass of the N2 adduct induced by the nitrofurazone antibiotic
Structure, 23, 2015
4R8U
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BU of 4r8u by Molmil
S-SAD structure of DINB-DNA Complex
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA, DNA polymerase IV, ...
著者Kottur, J, Nair, D.T, Weinert, T, Oligeric, V, Wang, M.
登録日2014-09-03
公開日2015-01-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Fast native-SAD phasing for routine macromolecular structure determination
Nat.Methods, 12, 2015
4IRK
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BU of 4irk by Molmil
structure of Polymerase-DNA complex, dna
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*TP*A*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3'), DNA (5'-D(*TP*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Nair, D.T, Sharma, A.
登録日2013-01-14
公開日2013-04-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.
Nucleic Acids Res., 41, 2013
5YYE
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BU of 5yye by Molmil
DNA polymerase IV - ternary complex 16
分子名称: 5'-O-[hydroxy{[hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]thymidine, DNA polymerase IV, DTN2, ...
著者Kottur, J, Nair, D.T.
登録日2017-12-08
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.325 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
4IR9
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BU of 4ir9 by Molmil
Polymerase-DNA complex
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(P*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Sharma, A, Nair, D.T.
登録日2013-01-14
公開日2013-04-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.
Nucleic Acids Res., 41, 2013
5ZLV
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DNA polymerase IV - DNA ternary complex with 50mM MgCl2
分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ...
著者Kottur, J, Nair, D.T.
登録日2018-03-29
公開日2018-11-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
4IR1
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BU of 4ir1 by Molmil
Polymerase-DNA Complex
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Sharma, A, Nair, D.T.
登録日2013-01-14
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.
Nucleic Acids Res., 41, 2013

 

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