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PDB: 19 件
5FSW
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RNA dependent RNA polymerase QDE-1 from Thielavia terrestris
分子名称: RNA DEPENDENT RNA POLYMERASE QDE-1
著者Qian, X, Hamid, F.M, El Sahili, A, Darwis, D.A, Wong, Y.H, Bhushan, S, Makeyev, E.V, Lescar, J.
登録日2016-01-08
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Functional Evolution in Orthologous Cell-Encoded RNA-Dependent RNA Polymerases
J.Biol.Chem., 291, 2016
2J7N
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BU of 2j7n by Molmil
Structure of the RNAi polymerase from Neurospora crassa
分子名称: GLYCEROL, MAGNESIUM ION, RNA-DEPENDENT RNA POLYMERASE
著者Salgado, P.S, Koivunen, M.R.L, Makeyev, E.V, Bamford, D.H, Stuart, D.I, Grimes, J.M.
登録日2006-10-13
公開日2006-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structure of an Rnai Polymerase Links RNA Silencing and Transcription.
Plos Biol., 4, 2006
2J7O
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STRUCTURE OF THE RNAI POLYMERASE FROM NEUROSPORA CRASSA
分子名称: MAGNESIUM ION, RNA DEPENDENT RNA POLYMERASE
著者Salgado, P.S, Koivunen, M.R.L, Makeyev, E.V, Bamford, D.H, Stuart, D.I, Grimes, J.M.
登録日2006-10-13
公開日2006-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The Structure of an Rnai Polymerase Links RNA Silencing and Transcription.
Plos Biol., 4, 2006
7ROZ
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BU of 7roz by Molmil
Structure of RNA-dependent RNA polymerase 2 (RDR2) from Arabidopsis thaliana
分子名称: MAGNESIUM ION, RNA-dependent RNA polymerase 2
著者Fukudome, A, Pikaard, C.S, Takagi, Y.
登録日2021-08-02
公開日2021-12-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2.
Proc.Natl.Acad.Sci.USA, 118, 2021
7RQS
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Arabidopsis RNA-dependent RNA polymerase 2
分子名称: MAGNESIUM ION, RNA-dependent RNA polymerase 2
著者Fukudome, A, Pikaard, C.S, Takagi, Y.
登録日2021-08-07
公開日2021-12-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2.
Proc.Natl.Acad.Sci.USA, 118, 2021
7W82
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Crystal structure of maize RDR2
分子名称: RNA-dependent RNA polymerase
著者Du, X, Yang, Z, Du, J.
登録日2021-12-07
公開日2022-06-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
7W88
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CryoEM structure of open form ZmRDR2 at 3.5 Angstroms resolution
分子名称: RNA-dependent RNA polymerase
著者Du, X, Yang, Z, Du, J.
登録日2021-12-07
公開日2022-06-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
7W84
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CryoEM structure of apo form ZmRDR2 at 3.4 Angstroms resolution
分子名称: RNA-dependent RNA polymerase
著者Du, X, Yang, Z, Du, J.
登録日2021-12-07
公開日2022-06-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production.
Plant Cell, 34, 2022
7Y7Q
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QDE-1 in complex with RNA template, RNA primer and 3'-dGTP
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Cui, R.X, Gan, J.H, Ma, J.B.
登録日2022-06-22
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7P
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QDE-1 in complex with RNA template, RNA primer and AMPNPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Cui, R.X, Gan, J.H, Ma, J.B.
登録日2022-06-22
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7R
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QDE-1 in complex with DNA template, RNA primer and 3'-dGTP
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*AP*AP*CP*TP*AP*CP*CP*GP*TP*CP*GP*GP*A)-3'), ...
著者Cui, R.X, Gan, J.H, Ma, J.B.
登録日2022-06-22
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7S
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QDE-1 in complex with DNA template, RNA primer and AMPNPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Cui, R.X, Gan, J.H, Ma, J.B.
登録日2022-06-22
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7T
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BU of 7y7t by Molmil
QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*AP*G*AP*GP*AP*CP*CP*TP*TP*TP*T)-3'), GUANOSINE-5'-TRIPHOSPHATE, ...
著者Cui, R.X, Gan, J.H, Ma, J.B.
登録日2022-06-22
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7EU0
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BU of 7eu0 by Molmil
The cryo-EM structure of A. thaliana Pol IV-RDR2 backtracked complex
分子名称: DNA (33-MER), DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*GP*AP*GP*TP*G)-3'), DNA-directed RNA polymerase IV subunit 1, ...
著者Fang, C.L, Wu, X.X, Huang, K, Zhang, Y.
登録日2021-05-15
公開日2021-12-29
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Pol IV and RDR2: A two-RNA-polymerase machine that produces double-stranded RNA.
Science, 374, 2021
7EU1
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BU of 7eu1 by Molmil
The cryo-EM structure of A. thaliana Pol IV-RDR2 holoenzyme
分子名称: DNA-directed RNA polymerase IV subunit 1, DNA-directed RNA polymerases II and IV subunit 5A, DNA-directed RNA polymerases II, ...
著者Fang, C.L, Wu, X.X, Huang, K, Zhang, Y.
登録日2021-05-15
公開日2021-12-29
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Pol IV and RDR2: A two-RNA-polymerase machine that produces double-stranded RNA.
Science, 374, 2021
8XMC
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BU of 8xmc by Molmil
Post-translocated Pol IV transcription elongation complex
分子名称: DNA-directed RNA polymerase IV subunit 1, DNA-directed RNA polymerase IV subunit 7, DNA-directed RNA polymerases II and IV subunit 5A, ...
著者Huang, K, Fang, C.L, Zhang, Y.
登録日2023-12-27
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Transcription of the Plant RNA polymerase IV is prone to backtracking
To Be Published
8XME
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BU of 8xme by Molmil
Backtracked Pol IV transcription elongation complex
分子名称: DNA-directed RNA polymerase IV subunit 1, DNA-directed RNA polymerase IV subunit 7, DNA-directed RNA polymerases II and IV subunit 5A, ...
著者Huang, K, Fang, C.L, Zhang, Y.
登録日2023-12-27
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Transcription of the Plant RNA polymerase IV is prone to backtracking
To Be Published
8XMB
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BU of 8xmb by Molmil
NTP-bound Pol IV transcription elongation complex
分子名称: DNA-directed RNA polymerase IV subunit 1, DNA-directed RNA polymerase IV subunit 7, DNA-directed RNA polymerases II and IV subunit 5A, ...
著者Huang, K, Fang, C.L, Zhang, Y.
登録日2023-12-27
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Transcription of the Plant RNA polymerase IV is prone to backtracking
To Be Published
8XMD
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BU of 8xmd by Molmil
Pre-translocated Pol IV transcription elongation complex
分子名称: DNA-directed RNA polymerase IV subunit 1, DNA-directed RNA polymerase IV subunit 7, DNA-directed RNA polymerases II and IV subunit 5A, ...
著者Huang, K, Fang, C.L, Zhang, Y.
登録日2023-12-27
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Transcription of the Plant RNA polymerase IV is prone to backtracking
To Be Published

223790

件を2024-08-14に公開中

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