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PDB: 53 件

6KZA
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Crystal structure of the complex of the interaction domains of E. coli DnaB helicase and DnaC helicase loader
分子名称: DNA replication protein DnaC, Replicative DNA helicase
著者Nagata, K, Okada, A, Ohtsuka, J, Ohkuri, T, Akama, Y, Sakiyama, Y, Miyazaki, E, Horita, S, Katayama, T, Ueda, T, Tanokura, M.
登録日2019-09-23
公開日2019-11-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of the complex of the interaction domains of Escherichia coli DnaB helicase and DnaC helicase loader: structural basis implying a distortion-accumulation mechanism for the DnaB ring opening caused by DnaC binding.
J.Biochem., 167, 2020
4A1F
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Crystal structure of C-terminal domain of Helicobacter pylori DnaB Helicase
分子名称: CITRATE ANION, REPLICATIVE DNA HELICASE
著者Stelter, M, Kapp, U, Timmins, J, Terradot, L.
登録日2011-09-14
公開日2012-03-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Architecture of a Dodecameric Bacterial Replicative Helicase.
Structure, 20, 2012
8GAO
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bacteriophage T4 stalled primosome with mutant gp41-E227Q
分子名称: DNA (70-mer), DNA primase, DnaB-like replicative helicase, ...
著者Feng, X, Li, H.
登録日2023-02-23
公開日2023-06-07
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8G0Z
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Mutant bacteriophage T4 gp41 helicase hexamer bound with single strand DNA and ATPgammaS in the stalled primosome
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DnaB-like replicative helicase, MAGNESIUM ION, ...
著者Feng, X, Li, H.
登録日2023-02-01
公開日2023-06-14
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
3BH0
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BU of 3bh0 by Molmil
ATPase Domain of G40P
分子名称: DNAB-LIKE REPLICATIVE HELICASE
著者Wang, G, Klein, M.G, Tokonzaba, E, Zhang, Y, Holden, L.G, Chen, X.S.
登録日2007-11-27
公開日2007-12-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The structure of a DnaB-family replicative helicase and its interactions with primase.
Nat.Struct.Mol.Biol., 15, 2008
1CR0
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BU of 1cr0 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE4 PROTEIN OF BACTERIOPHAGE T7
分子名称: DNA PRIMASE/HELICASE, SULFATE ION
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1E0J
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BU of 1e0j by Molmil
gp4d helicase from phage T7 ADPNP complex
分子名称: DNA HELICASE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Singleton, M.R, Sawaya, M.R, Ellenberger, T, Wigley, D.B.
登録日2000-03-30
公開日2000-06-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of T7 Gene 4 Ring Helicase Indicates a Mechanism for Sequential Hydrolysis of Nucleotides
Cell(Cambridge,Mass.), 101, 2000
1E0K
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gp4d helicase from phage T7
分子名称: DNA HELICASE
著者Singleton, M.R, Sawaya, M.R, Ellenberger, T, Wigley, D.B.
登録日2000-03-30
公開日2000-06-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal Structure of T7 Gene 4 Ring Helicase Indicates a Mechanism for Sequential Hydrolysis of Nucleotides
Cell(Cambridge,Mass.), 101, 2000
1CR1
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BU of 1cr1 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTTP
分子名称: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-TRIPHOSPHATE
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR4
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BU of 1cr4 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTDP
分子名称: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-DIPHOSPHATE
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR2
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BU of 1cr2 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA PRIMASE/HELICASE, SULFATE ION
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
8DVF
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BU of 8dvf by Molmil
T4 Bacteriophage primosome with single strand DNA, state 1
分子名称: DNA (5'-D(P*GP*GP*CP*TP*G)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA primase, ...
著者Feng, X, Li, H.
登録日2022-07-28
公開日2023-06-14
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DVI
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BU of 8dvi by Molmil
T4 bacteriophage primosome with single strand DNA, State 2
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (70-MER), DNA primase, ...
著者Feng, X, Li, H.
登録日2022-07-29
公開日2023-06-14
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DUO
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BU of 8duo by Molmil
DNA-free T4 Bacteriophage gp41 hexamer
分子名称: DnaB-like replicative helicase, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Feng, X, Li, H.
登録日2022-07-27
公開日2023-06-14
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DTP
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BU of 8dtp by Molmil
Close state of T4 bacteriophage gp41 hexamer bound with single strand DNA
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DnaB-like replicative helicase, MAGNESIUM ION, ...
著者Feng, X, Li, H.
登録日2022-07-26
公開日2023-06-14
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DW6
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BU of 8dw6 by Molmil
T4 bacteriophage primosome with single-strand DNA, State 3
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (70-MER), DNA primase, ...
著者Feng, X, Li, H.
登録日2022-07-31
公開日2023-06-14
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DUE
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BU of 8due by Molmil
Open state of T4 bacteriophage gp41 hexamer bound with single strand DNA
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DnaB-like replicative helicase, MAGNESIUM ION, ...
著者Feng, X, Li, H.
登録日2022-07-27
公開日2023-06-14
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
6FRH
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BU of 6frh by Molmil
Crystal structure of Ssp DnaB Mini-Intein variant M86
分子名称: Replicative DNA helicase,Replicative DNA helicase
著者Popp, M.A, Blankenfeldt, W, Gazdag, M.E, Matern, J.J.C, Mootz, H.D.
登録日2018-02-15
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidine.
Chem Sci, 10, 2019
6FRE
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BU of 6fre by Molmil
Crystal structure of G-1F/H73A mutant of Ssp DnaB Mini-Intein variant M86
分子名称: Replicative DNA helicase,Replicative DNA helicase
著者Popp, M.A, Blankenfeldt, W, Friedel, K, Mootz, H.D.
登録日2018-02-15
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidine.
Chem Sci, 10, 2019
6FRG
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BU of 6frg by Molmil
Crystal structure of G-1F mutant of Ssp DnaB Mini-Intein variant M86
分子名称: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, Replicative DNA helicase, ...
著者Popp, M.A, Blankenfeldt, W, Friedel, K, Mootz, H.D.
登録日2018-02-15
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.535 Å)
主引用文献A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidine.
Chem Sci, 10, 2019
6QEM
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BU of 6qem by Molmil
E. coli DnaBC complex bound to ssDNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein DnaC, MAGNESIUM ION, ...
著者Arias-Palomo, E, Puri, N, O'Shea Murray, V.L, Yan, Q, Berger, J.M.
登録日2019-01-08
公開日2019-03-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Physical Basis for the Loading of a Bacterial Replicative Helicase onto DNA.
Mol.Cell, 74, 2019
1Q57
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The Crystal Structure of the Bifunctional Primase-Helicase of Bacteriophage T7
分子名称: DNA primase/helicase
著者Toth, E.A, Li, Y, Sawaya, M.R, Cheng, Y, Ellenberger, T.
登録日2003-08-06
公開日2003-11-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献The Crystal Structure of the Bifunctional Primase-Helicase of Bacteriophage T7
Mol.Cell, 12, 2003
6BBM
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Mechanisms of Opening and Closing of the Bacterial Replicative Helicase: The DnaB Helicase and Lambda P Helicase Loader Complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Replication protein P, Replicative DNA helicase
著者Chase, J, Catalano, A, Noble, A.J, Eng, E.T, Olinares, P.D.B, Molloy, K, Pakotiprapha, D, Samuels, M, Chain, B, des Georges, A, Jeruzalmi, D.
登録日2017-10-18
公開日2019-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Mechanisms of opening and closing of the bacterial replicative helicase.
Elife, 7, 2018
4NMN
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BU of 4nmn by Molmil
Aquifex aeolicus replicative helicase (DnaB) complexed with ADP, at 3.3 resolution
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Replicative DNA helicase, ...
著者Lyubimov, A.Y, Strycharska, M.S, Erzberger, J.P, Berger, J.M.
登録日2013-11-15
公開日2014-01-29
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献Nucleotide and partner-protein control of bacterial replicative helicase structure and function.
Mol.Cell, 52, 2013
4M4W
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BU of 4m4w by Molmil
Mechanistic implications for the bacterial primosome assembly of the structure of a helicase-helicase loader complex
分子名称: DNA primase, Primosomal protein DnaI, Replicative helicase
著者Liu, B, Eliason, W.K, Steitz, T.A.
登録日2013-08-07
公開日2013-09-25
最終更新日2013-10-02
実験手法X-RAY DIFFRACTION (6.1 Å)
主引用文献Structure of a helicase-helicase loader complex reveals insights into the mechanism of bacterial primosome assembly.
Nat Commun, 4, 2013

 

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