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PDB: 1491 件

4XEJ
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BU of 4xej by Molmil
IRES bound to bacterial Ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Zhu, J, Korostelev, A, Noller, H.F, Donohue, J.P.
登録日2014-12-23
公開日2015-02-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Initiation of translation in bacteria by a structured eukaryotic IRES RNA.
Nature, 519, 2015
4KVB
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BU of 4kvb by Molmil
Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Murphy, E.L, Jogl, G.
登録日2013-05-22
公開日2014-06-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (4.198 Å)
主引用文献Structural robustness of the ribosome inferred from the X-ray crystal structure of a 30S ribosomal subunit lacking ribosomal protein S17
To be Published
4LFA
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BU of 4lfa by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S rRNA, HYGROMYCIN B, MAGNESIUM ION, ...
著者Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T.
登録日2013-06-26
公開日2014-07-02
実験手法X-RAY DIFFRACTION (3.6461 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
to be published, 2013
4KZZ
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BU of 4kzz by Molmil
Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
分子名称: 18S Ribosomal RNA, 40S Ribosomal Protein RACK1, 40S Ribosomal Protein S10, ...
著者Lomakin, I.B, Steitz, T.A.
登録日2013-05-30
公開日2013-07-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (7.0305 Å)
主引用文献The initiation of mammalian protein synthesis and mRNA scanning mechanism.
Nature, 500, 2013
4L47
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BU of 4l47 by Molmil
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Maehigashi, T, Dunkle, J.A, Dunham, C.M.
登録日2013-06-07
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.220001 Å)
主引用文献Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LAB
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BU of 4lab by Molmil
Crystal structure of the catalytic domain of RluB
分子名称: CHLORIDE ION, PLATINUM (II) ION, Ribosomal large subunit pseudouridine synthase B
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-06-19
公開日2013-11-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5043 Å)
主引用文献The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs.
Nucleic Acids Res., 42, 2014
4KZY
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BU of 4kzy by Molmil
Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.
分子名称: 18S Ribosomal RNA, 40S Ribosomal Protein RACK1, 40S Ribosomal Protein S10, ...
著者Lomakin, I.B, Steitz, T.A.
登録日2013-05-30
公開日2013-07-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (7.01 Å)
主引用文献The initiation of mammalian protein synthesis and mRNA scanning mechanism.
Nature, 500, 2013
6RXT
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BU of 6rxt by Molmil
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A
分子名称: 35S ribosomal RNA, 40S ribosomal protein S1, 40S ribosomal protein S13-like protein, ...
著者Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E.
登録日2019-06-10
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Mol.Cell, 75, 2019
6RXZ
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BU of 6rxz by Molmil
Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b
分子名称: 35S ribosomal RNA, 40S ribosomal protein S11-like protein, 40S ribosomal protein S13-like protein, ...
著者Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E.
登録日2019-06-10
公開日2019-08-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Mol.Cell, 75, 2019
4LF7
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BU of 4lf7 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S rRNA, MAGNESIUM ION, PAROMOMYCIN, ...
著者Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T.
登録日2013-06-26
公開日2014-07-02
実験手法X-RAY DIFFRACTION (3.1484 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
To be Published, 2013
4L71
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BU of 4l71 by Molmil
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Maehigashi, T, Dunkle, J.A, Dunham, C.M.
登録日2013-06-13
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.900001 Å)
主引用文献Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LGT
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BU of 4lgt by Molmil
Crystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrate
分子名称: Ribosomal large subunit pseudouridine synthase B, stem-loop of 23S rRNA
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-06-28
公開日2013-11-20
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs.
Nucleic Acids Res., 42, 2014
6S47
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BU of 6s47 by Molmil
Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1
分子名称: 18S rRNA (1707-MER), 28S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Kasari, V, Pochopien, A.A, Margus, T, Murina, V, Turnbull, K, Zhou, Y, Nissan, T, Graf, M, Novacek, J, Atkinson, G.C, Johansson, M.J.O, Wilson, D.N, Hauryliuk, V.
登録日2019-06-26
公開日2019-07-24
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling.
Nucleic Acids Res., 47, 2019
4LF9
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BU of 4lf9 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, MAGNESIUM ION, ...
著者Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T.
登録日2013-06-26
公開日2014-07-02
実験手法X-RAY DIFFRACTION (3.2811 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
to be published, 2013
4LNT
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BU of 4lnt by Molmil
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Maehigashi, T, Dunkle, J.A, Dunham, C.M.
登録日2013-07-12
公開日2014-08-06
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LEL
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BU of 4lel by Molmil
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Maehigashi, T, Dunkle, J.A, Dunham, C.M.
登録日2013-06-25
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.90000033 Å)
主引用文献Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LFC
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BU of 4lfc by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S rRNA, MAGNESIUM ION, POTASSIUM ION, ...
著者Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T.
登録日2013-06-26
公開日2014-07-02
実験手法X-RAY DIFFRACTION (3.602 Å)
主引用文献
to be published, 2013
4LF5
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BU of 4lf5 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S rRNA, HYGROMYCIN B, MAGNESIUM ION, ...
著者Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T.
登録日2013-06-26
公開日2014-07-02
実験手法X-RAY DIFFRACTION (3.753 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
To be Published, 2013
4LF6
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BU of 4lf6 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S rRNA, MAGNESIUM ION, NEOMYCIN, ...
著者Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T.
登録日2013-06-26
公開日2014-07-02
実験手法X-RAY DIFFRACTION (3.3052 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
To be Published, 2013
4LFB
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BU of 4lfb by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S rRNA, MAGNESIUM ION, NEOMYCIN, ...
著者Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T.
登録日2013-06-26
公開日2014-07-02
実験手法X-RAY DIFFRACTION (3.009 Å)
主引用文献Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
to be published, 2013
4LSK
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BU of 4lsk by Molmil
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Maehigashi, T, Dunkle, J.A, Dunham, C.M.
登録日2013-07-22
公開日2014-08-06
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (3.48000622 Å)
主引用文献Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
6SKF
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BU of 6skf by Molmil
Cryo-EM Structure of T. kodakarensis 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Matzov, D, Sas-Chen, A, Thomas, J.M, Santangelo, T, Meier, J.L, Schwartz, S, Shalev-Benami, M.
登録日2019-08-15
公開日2020-07-29
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
Nature, 583, 2020
6SPF
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BU of 6spf by Molmil
Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A.
登録日2019-09-01
公開日2019-10-23
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate.
Proc.Natl.Acad.Sci.USA, 116, 2019
4YHH
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BU of 4yhh by Molmil
Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with tigecycline
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Schedlbauer, A, Kaminishi, T, Ochoa-Lizarralde, B, Dhimole, N, Zhou, S, Lopez-Alonso, J.P, Connell, S.R, Fucini, P.
登録日2015-02-27
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.417 Å)
主引用文献Structural characterization of an alternative mode of tigecycline binding to the bacterial ribosome.
Antimicrob.Agents Chemother., 59, 2015
4LFZ
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BU of 4lfz by Molmil
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Maehigashi, T, Dunkle, J.A, Dunham, C.M.
登録日2013-06-27
公開日2014-08-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.92000055 Å)
主引用文献Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014

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