Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 86 件
6U83
DownloadVisualize
BU of 6u83 by Molmil
OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-ALANINE, Outer membrane associated protein, ...
著者Michalska, K, Skarina, T, Stogios, P.J, Di Leo, R, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-09-04
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3566 Å)
主引用文献OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
5JIR
DownloadVisualize
BU of 5jir by Molmil
Crystal structure of Treponema pallidum protein Tp0624
分子名称: CHLORIDE ION, GLYCEROL, OOP family OmpA-OmpF porin
著者Parker, M.L, Boulanger, M.J.
登録日2016-04-22
公開日2016-11-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Structure of Treponema pallidum Tp0624 Reveals a Modular Assembly of Divergently Functionalized and Previously Uncharacterized Domains.
Plos One, 11, 2016
7RJJ
DownloadVisualize
BU of 7rjj by Molmil
Crystal Structure of the Peptidoglycan Binding Domain of the Outer Membrane Protein (OmpA) from Klebsiella pneumoniae with bound D-alanine
分子名称: CHLORIDE ION, D-ALANINE, OmpA family protein
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-21
公開日2021-07-28
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
7BBA
DownloadVisualize
BU of 7bba by Molmil
Structure of the TagL peptidoglycan binding domain from EAEC T6SS
分子名称: Putative type VI secretion protein, SULFATE ION
著者Nguyen, V.S, Cambillau, C, Leone, P.
登録日2020-12-17
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Anchoring the T6SS to the cell wall: Crystal structure of the peptidoglycan binding domain of the TagL accessory protein.
Plos One, 16, 2021
4ERH
DownloadVisualize
BU of 4erh by Molmil
The crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
分子名称: GLYCEROL, Outer membrane protein A, SULFATE ION
著者Tan, K, Wu, R, Jedrzejczak, R, Adkins, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
登録日2012-04-20
公開日2012-05-02
最終更新日2015-04-01
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献The crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
To be Published
2AIZ
DownloadVisualize
BU of 2aiz by Molmil
Solution structure of peptidoglycan associated lipoprotein from Haemophilus influenza bound to UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
分子名称: L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine, N-acetyl-beta-muramic acid, Outer membrane protein P6 (Fragment), ...
著者Parsons, L.M, Lin, F, Orban, J, Structure 2 Function Project (S2F)
登録日2005-08-01
公開日2006-03-14
最終更新日2023-02-15
実験手法SOLUTION NMR
主引用文献Peptidoglycan recognition by pal, an outer membrane lipoprotein.
Biochemistry, 45, 2006
4B5C
DownloadVisualize
BU of 4b5c by Molmil
Crystal structure of the peptidoglycan-associated lipoprotein from Burkholderia pseudomallei
分子名称: ACETATE ION, PUTATIVE OMPA FAMILY LIPOPROTEIN
著者Gourlay, L.J, Peri, C, Conchillo-Sole, O, Ferrer-Navarro, M, Gori, A, Longhi, R, Rinchai, D, Lertmemongkolchai, G, Lassaux, P, Daura, X, Colombo, G, Bolognesi, M.
登録日2012-08-03
公開日2013-08-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Exploiting the Burkholderia Pseudomallei Acute Phase Antigen Bpsl2765 for Structure-Based Epitope Discovery/Design in Structural Vaccinology.
Chem.Biool., 20, 2013
4B62
DownloadVisualize
BU of 4b62 by Molmil
The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, TSSL1
著者Robb, C.S, Carlson, M, Nano, F.E, Boraston, A.B.
登録日2012-08-08
公開日2013-10-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal Structure of the Periplasmic Peptidoglycan Binding Anchor of a T6Ss from Pseudomonas Aeruginosa.
To be Published
2MQE
DownloadVisualize
BU of 2mqe by Molmil
Solution structure of Escherichia coli Outer membrane protein A C-terminal domain
分子名称: OmpA domain protein transmembrane region-containing protein
著者Ishida, H, Vogel, H.
登録日2014-06-19
公開日2014-09-03
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The periplasmic domain of Escherichia coli outer membrane protein A can undergo a localized temperature dependent structural transition.
Biochim.Biophys.Acta, 1838, 2014
3WPW
DownloadVisualize
BU of 3wpw by Molmil
Structure of PomBc5, a periplasmic fragment of PomB from Vibrio
分子名称: ACETATE ION, PomB
著者Takao, M, Sakuma, M, Zhu, S, Homma, M, Kojima, S, Imada, K.
登録日2014-01-17
公開日2014-09-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational change in the periplasmic region of the flagellar stator coupled with the assembly around the rotor
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
2N48
DownloadVisualize
BU of 2n48 by Molmil
EC-NMR Structure of Escherichia coli YiaD Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target ER553
分子名称: Probable lipoprotein YiaD
著者Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2015-06-17
公開日2015-07-01
最終更新日2024-07-03
実験手法SOLUTION NMR
主引用文献Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
3WPX
DownloadVisualize
BU of 3wpx by Molmil
Structure of PomBc4, a periplasmic fragment of PomB from Vibrio alginolyticus
分子名称: PomB
著者Takao, M, Sakuma, M, Zhu, S, Homma, M, Kojima, S, Imada, K.
登録日2014-01-17
公開日2014-09-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational change in the periplasmic region of the flagellar stator coupled with the assembly around the rotor
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
5U1H
DownloadVisualize
BU of 5u1h by Molmil
Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa
分子名称: (2R,6S)-2-amino-6-(carboxyamino)-7-{[(1R)-1-carboxyethyl]amino}-7-oxoheptanoic acid, ACETATE ION, CHLORIDE ION, ...
著者Watanabe, N, Stogios, P.J, Skarina, T, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-11-28
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa
To be published
3OON
DownloadVisualize
BU of 3oon by Molmil
The structure of an outer membrance protein from Borrelia burgdorferi B31
分子名称: Outer membrane protein (Tpn50), SULFATE ION
著者Fan, Y, Bigelow, L, Feldman, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-08-31
公開日2010-09-22
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.
Protein Sci., 26, 2017
1OAP
DownloadVisualize
BU of 1oap by Molmil
Mad structure of the periplasmique domain of the Escherichia coli PAL protein
分子名称: PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN, SULFATE ION
著者Abergel, C, Walburger, A, Bouveret, E, Claverie, J.M.
登録日2003-01-20
公開日2004-02-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystallization and preliminary crystallographic study of the peptidoglycan-associated lipoprotein from Escherichia coli.
Acta Crystallogr.,Sect.D, 57, 2001
5VES
DownloadVisualize
BU of 5ves by Molmil
The 2.4A crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
分子名称: Outer membrane protein A, SULFATE ION
著者Tan, K, Wu, R, Jedrzejczak, R, Adkins, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
登録日2017-04-05
公開日2017-04-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.
Protein Sci., 26, 2017
1R1M
DownloadVisualize
BU of 1r1m by Molmil
Structure of the OmpA-like domain of RmpM from Neisseria meningitidis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer membrane protein class 4
著者Grizot, S, Buchanan, S.K.
登録日2003-09-24
公開日2004-05-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the OmpA-like domain of RmpM from Neisseria meningitidis
Mol.Microbiol., 51, 2004
5EAZ
DownloadVisualize
BU of 5eaz by Molmil
crystal form I of YfiB belonging to space groups P21
分子名称: SULFATE ION, YfiB
著者Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
登録日2015-10-17
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
4G4Y
DownloadVisualize
BU of 4g4y by Molmil
Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: ALANINE, Outer membrane protein Omp38, SULFATE ION
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published
5EB0
DownloadVisualize
BU of 5eb0 by Molmil
crystal form II of YfiB belonging to P41
分子名称: SULFATE ION, YfiB
著者Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
登録日2015-10-17
公開日2016-05-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
4G88
DownloadVisualize
BU of 4g88 by Molmil
Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: 2,6-DIAMINOPIMELIC ACID, Outer membrane protein Omp38, S,R MESO-TARTARIC ACID
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-22
公開日2013-07-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
to be published
4G4Z
DownloadVisualize
BU of 4g4z by Molmil
Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: D-ALANINE, Outer membrane protein Omp38, SULFATE ION
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published
3IMP
DownloadVisualize
BU of 3imp by Molmil
New crystal form of the C-terminal domain of Helicobacter pylori MotB (residues 125-256)
分子名称: CHLORIDE ION, Chemotaxis protein motB, NICKEL (II) ION
著者Roujeinikova, A.
登録日2009-08-11
公開日2010-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic and Molecular Dynamics Analysis of Loop Motions Unmasking the Peptidoglycan-Binding Site in Stator Protein MotB of Flagellar Motor
Plos One, 6, 2011
4PWT
DownloadVisualize
BU of 4pwt by Molmil
Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92
分子名称: FORMIC ACID, PYROPHOSPHATE 2-, Peptidoglycan-associated lipoprotein, ...
著者Maltseva, N, Kim, Y, Osipiuk, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-03-21
公開日2014-04-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92
To be Published
3KHN
DownloadVisualize
BU of 3khn by Molmil
Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris.
分子名称: MotB protein, putative
著者Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-10-30
公開日2009-12-01
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris
To be Published

 

1234>

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon