Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 129 件

3FHH
DownloadVisualize
BU of 3fhh by Molmil
Crystal structure of the heme/hemoglobin outer membrane transporter ShuA from Shigella dysenteriae
分子名称: LEAD (II) ION, Outer membrane heme receptor ShuA, octyl beta-D-glucopyranoside
著者Brillet, K, Cobessi, D.
登録日2008-12-09
公開日2009-07-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the heme/hemoglobin outer membrane receptor ShuA from Shigella dysenteriae: heme binding by an induced fit mechanism.
Proteins, 78, 2010
5OUT
DownloadVisualize
BU of 5out by Molmil
CRYSTAL STRUCTURE OF THE FERRIC ENTEROBACTIN RECEPTOR (PFEA) MUTANT (G324V) FROM PSEUDOMONAS AERUGINOSA
分子名称: Ferric enterobactin receptor
著者Moynie, L, Naismith, J.H.
登録日2017-08-24
公開日2018-09-05
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model.
Nat Commun, 10, 2019
8BMX
DownloadVisualize
BU of 8bmx by Molmil
Bacteroides thetaiotaomicron B12 TonB dependent transporter in complex with a surface lipoprotein
分子名称: Putative TonB-linked outer membrane receptor, YncE family protein
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-09-20
実験手法X-RAY DIFFRACTION (3.72 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
9C4O
DownloadVisualize
BU of 9c4o by Molmil
Cryo-EM structure of PqqU with ligand PQQ
分子名称: CALCIUM ION, PYRROLOQUINOLINE QUINONE, Pyrroloquinoline quinone transporter
著者Munder, F, Venugopal, H, Grinter, R.
登録日2024-06-04
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (1.99 Å)
主引用文献High-affinity PQQ import is widespread in Gram-negative bacteria.
To Be Published
4EPA
DownloadVisualize
BU of 4epa by Molmil
The crystal structure of the ferric yersiniabactin uptake receptor FyuA from Yersinia pestis
分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Pesticin receptor
著者Lukacik, P, Barnard, T.J, Buchanan, S.K.
登録日2012-04-17
公開日2012-06-20
最終更新日2012-07-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural engineering of a phage lysin that targets Gram-negative pathogens.
Proc.Natl.Acad.Sci.USA, 109, 2012
6R1F
DownloadVisualize
BU of 6r1f by Molmil
Crystal structure of the ferric enterobactin receptor mutant R480A from Pseudomonas aeruginosa (PfeA) in complex with enterobactin
分子名称: FE (III) ION, Ferric enterobactin receptor, N,N',N''-[(3S,7S,11S)-2,6,10-trioxo-1,5,9-trioxacyclododecane-3,7,11-triyl]tris(2,3-dihydroxybenzamide)
著者Moynie, L, Naismith, J.H.
登録日2019-03-14
公開日2019-04-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model.
Nat Commun, 10, 2019
5C58
DownloadVisualize
BU of 5c58 by Molmil
A double mutant of serratia marcescens hemophore receptor HasR in complex with its hemophore HasA and heme
分子名称: HasR protein, Hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE
著者Becker, S, Diederichs, K, Welte, W.
登録日2015-06-19
公開日2016-06-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.795 Å)
主引用文献Binding of HasA by its transmembrane receptor HasR follows a conformational funnel mechanism.
Eur.Biophys.J., 49, 2020
6Y47
DownloadVisualize
BU of 6y47 by Molmil
Crystal structure of the ferric enterobactin receptor (PfeA) in complex with BCV-L5
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Ferric enterobactin receptor, ...
著者Naismith, J.H, Moynie, L.M.
登録日2020-02-19
公開日2021-01-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa.
Acs Infect Dis., 2022
8THE
DownloadVisualize
BU of 8the by Molmil
Cryo-EM structure of Pseudomonas aeruginosa TonB-dependent transporter PhuR in complex with synthetic antibody and heme
分子名称: (2~{R},4~{R},5~{S},6~{S})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[[(2~{R},3~{S},4~{S},5~{R},6~{S})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{R},4~{R},5~{S},6~{S})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{S})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-4,5-bis(oxidanyl)oxane-2-carboxylic acid, Heme/hemoglobin uptake outer membrane receptor PhuR, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Knejski, P, Erramilli, S.K, Kossiakoff, A.A.
登録日2023-07-15
公開日2024-01-31
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Chaperone-assisted cryo-EM structure of P. aeruginosa PhuR reveals molecular basis for heme binding.
Structure, 32, 2024
6Q5E
DownloadVisualize
BU of 6q5e by Molmil
Crystal structure of the ferric enterobactin receptor from Pseudomonas aeruginosa (PfeA) in complex with enterobactin
分子名称: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, FE (III) ION, Ferric enterobactin receptor, ...
著者Moynie, L, Naismith, J.H.
登録日2018-12-07
公開日2019-01-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model.
Nat Commun, 10, 2019
6V81
DownloadVisualize
BU of 6v81 by Molmil
The crystal structure of the outer-membrane transporter YncD
分子名称: CALCIUM ION, Probable TonB-dependent receptor YncD, octyl beta-D-glucopyranoside
著者Grinter, R.
登録日2019-12-10
公開日2020-05-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.957 Å)
主引用文献The crystal structure of the TonB-dependent transporter YncD reveals a positively charged substrate-binding site.
Acta Crystallogr D Struct Biol, 76, 2020
5FP2
DownloadVisualize
BU of 5fp2 by Molmil
Crystal structure of the siderophore receptor PirA from Pseudomonas aeruginosa
分子名称: FERRIC ENTEROBACTIN RECEPTOR PIRA, N-OCTANE, SULFATE ION
著者Moynie, L, Tortajada, A, Naismith, J.H.
登録日2015-11-27
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Structure and Function of the PiuA and PirA Siderophore-Drug Receptors from Pseudomonas aeruginosa and Acinetobacter baumannii.
Antimicrob. Agents Chemother., 61, 2017
2O5P
DownloadVisualize
BU of 2o5p by Molmil
Crystal structure of the full length ferric pyoverdine outer membrane receptor FpvA of Pseudomonas aeruginosa in its apo form
分子名称: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, Ferripyoverdine receptor, PHOSPHATE ION
著者Cobessi, D.
登録日2006-12-06
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献A beta strand lock exchange for signal transduction in TonB-dependent transducers on the basis of a common structural motif.
Structure, 15, 2007
7OBW
DownloadVisualize
BU of 7obw by Molmil
Crystal structure of the ferric enterobactin receptor (PfeA) from Pseudomonas aeruginosa in complex with TCV-L6
分子名称: FE (III) ION, Ferric enterobactin receptor, [4-[[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]ethanoylamino]propanoyl]amino]propanoyl]amino]methyl]-1,2,3-triazol-1-yl]methyl 4-[4-[(5~{S})-5-(acetamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]-2-fluoranyl-phenyl]piperazine-1-carboxylate
著者Moynie, L, Naismith, J.H.
登録日2021-04-23
公開日2021-08-04
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa .
Acs Infect Dis., 8, 2022
1KMP
DownloadVisualize
BU of 1kmp by Molmil
Crystal structure of the Outer Membrane Transporter FecA Complexed with Ferric Citrate
分子名称: CITRIC ACID, FE (III) ION, IRON(III) DICITRATE TRANSPORT PROTEIN FECA, ...
著者Ferguson, A.D, Chakraborty, R, Smith, B.S, Esser, L, van der Helm, D, Deisenhofer, J.
登録日2001-12-17
公開日2002-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of gating by the outer membrane transporter FecA.
Science, 295, 2002
1KMO
DownloadVisualize
BU of 1kmo by Molmil
Crystal structure of the Outer Membrane Transporter FecA
分子名称: HEPTANE-1,2,3-TRIOL, Iron(III) dicitrate transport protein fecA, LAURYL DIMETHYLAMINE-N-OXIDE
著者Ferguson, A.D, Chakraborty, R, Smith, B.S, Esser, L, van der Helm, D, Deisenhofer, J.
登録日2001-12-17
公開日2002-03-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of gating by the outer membrane transporter FecA.
Science, 295, 2002
3M8D
DownloadVisualize
BU of 3m8d by Molmil
Crystal structure of spin-labeled BtuB V10R1 with bound calcium and cyanocobalamin
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, CYANOCOBALAMIN, ...
著者Freed, D.M, Horanyi, P.S, Wiener, M.C, Cafiso, D.S.
登録日2010-03-17
公開日2010-09-15
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Conformational exchange in a membrane transport protein is altered in protein crystals.
Biophys.J., 99, 2010
5T3R
DownloadVisualize
BU of 5t3r by Molmil
Crystal structure of BT1762-1763
分子名称: MAGNESIUM ION, SODIUM ION, SusC homolog, ...
著者van den Berg, B.
登録日2016-08-26
公開日2016-12-14
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
5T4Y
DownloadVisualize
BU of 5t4y by Molmil
Crystal structure of BT1762-1763
分子名称: MAGNESIUM ION, SusC homolog, SusD homolog
著者van den Berg, B.
登録日2016-08-30
公開日2016-12-14
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
Nature, 541, 2017
3M8B
DownloadVisualize
BU of 3m8b by Molmil
Crystal structure of spin-labeled BtuB V10R1 in the apo state
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MAGNESIUM ION, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ...
著者Freed, D.M, Horanyi, P.S, Wiener, M.C, Cafiso, D.S.
登録日2010-03-17
公開日2010-09-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Conformational exchange in a membrane transport protein is altered in protein crystals.
Biophys.J., 99, 2010
2W75
DownloadVisualize
BU of 2w75 by Molmil
Structures of P. aeruginosa FpvA bound to heterologous pyoverdines: Apo-FpvA
分子名称: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, FERRIPYOVERDINE RECEPTOR, PHOSPHATE ION
著者Greenwald, J, Nader, M, Celia, H, Gruffaz, C, Meyer, J.-M, Schalk, I.J, Pattus, F.
登録日2008-12-20
公開日2009-05-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter.
Mol.Microbiol., 72, 2009
2W76
DownloadVisualize
BU of 2w76 by Molmil
Structures of P. aeruginosa FpvA bound to heterologous pyoverdines: FpvA-Pvd(Pa6)-Fe complex
分子名称: (1S)-1-CARBOXY-5-[(3-CARBOXYPROPANOYL)AMINO]-8,9-DIHYDROXY-1,2,3,4-TETRAHYDROPYRIMIDO[1,2-A]QUINOLIN-11-IUM, 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, FE (III) ION, ...
著者Greenwald, J, Nader, M, Celia, H, Gruffaz, C, Meyer, J.-M, Schalk, I.J, Pattus, F.
登録日2008-12-20
公開日2009-05-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter.
Mol.Microbiol., 72, 2009
5FP1
DownloadVisualize
BU of 5fp1 by Molmil
Crystal structure of the siderophore receptor PiuA from Acinetobacter baumannii
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, PHOSPHATE ION, TONB-DEPENDENT SIDEROPHORE RECEPTOR
著者Moynie, L, Tortajada, A, Naismith, J.H.
登録日2015-11-26
公開日2016-05-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structure and Function of the PiuA and PirA Siderophore-Drug Receptors from Pseudomonas aeruginosa and Acinetobacter baumannii.
Antimicrob. Agents Chemother., 61, 2017
5FOK
DownloadVisualize
BU of 5fok by Molmil
Crystal structure of the siderophore receptor PiuA from Pseudomonas aeruginosa
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, IRON TRANSPORT OUTER MEMBRANE RECEPTOR, SODIUM ION, ...
著者Moynie, L, Naismith, J.H.
登録日2015-11-23
公開日2016-05-11
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Function of the PiuA and PirA Siderophore-Drug Receptors from Pseudomonas aeruginosa and Acinetobacter baumannii.
Antimicrob. Agents Chemother., 61, 2017
5FR8
DownloadVisualize
BU of 5fr8 by Molmil
Crystal structure of the siderophore receptor PirA from Acinetobacter baumannii
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, TONB-DEPENDENT SIDEROPHORE RECEPTOR
著者Moynie, L, Tortajada, A, Naismith, J.H.
登録日2015-12-16
公開日2016-05-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structure and Function of the PiuA and PirA Siderophore-Drug Receptors from Pseudomonas aeruginosa and Acinetobacter baumannii.
Antimicrob. Agents Chemother., 61, 2017

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon