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PDB: 588 件

6SCX
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Crystal structure of the catalytic domain of human NUDT12 in complex with 7-methyl-guanosine-5'-triphosphate
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, CADMIUM ION, Peroxisomal NADH pyrophosphatase NUDT12
著者McCarthy, A.A, Chen, K.M, Wu, H, Li, L, Homolka, D, Gos, P, Fleury-Olela, F, Pillai, R.S.
登録日2019-07-25
公開日2020-01-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Decapping Enzyme NUDT12 Partners with BLMH for Cytoplasmic Surveillance of NAD-Capped RNAs.
Cell Rep, 29, 2019
6O3P
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Crystal structure of the catalytic domain of mouse Nudt12 in complex with AMP and 3 Mg2+ ions
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Peroxisomal NADH pyrophosphatase NUDT12, ...
著者Tong, L, Wu, Y.
登録日2019-02-27
公開日2019-05-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and mechanistic basis of mammalian Nudt12 RNA deNADding.
Nat.Chem.Biol., 15, 2019
7E44
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Crystal structure of NudC complexed with dpCoA
分子名称: DEPHOSPHO COENZYME A, NADH pyrophosphatase, ZINC ION
著者Zhou, W, Guan, Z.Y, Yin, P, Zhang, D.L.
登録日2021-02-10
公開日2021-07-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into dpCoA-RNA decapping by NudC.
Rna Biol., 18, 2021
2FML
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Crystal structure of MutT/nudix family protein from Enterococcus faecalis
分子名称: GLYCEROL, MutT/nudix family protein
著者Chang, C, Quartey, P, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-01-09
公開日2006-02-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystal structure of MutT/nudix family protein from Enterococcus faecalis
To be Published
2GB5
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BU of 2gb5 by Molmil
Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
分子名称: NADH pyrophosphatase, ZINC ION
著者Joint Center for Structural Genomics (JCSG)
登録日2006-03-09
公開日2006-03-28
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
To be published
4HFQ
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BU of 4hfq by Molmil
Crystal structure of UDP-X diphosphatase
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
著者Duong-Ly, K.C, Amzel, L.M, Gabelli, S.B.
登録日2012-10-05
公開日2013-08-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献A UDP-X diphosphatase from Streptococcus pneumoniae hydrolyzes precursors of peptidoglycan biosynthesis.
Plos One, 8, 2013
2QJT
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Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase complexed with AMP and MN ion from Francisella tularensis
分子名称: ADENOSINE MONOPHOSPHATE, MANGANESE (II) ION, Nicotinamide-nucleotide adenylyltransferase
著者Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
登録日2007-07-09
公開日2008-03-04
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
2A6T
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Crystal structure of S.pombe mRNA decapping enzyme Dcp2p
分子名称: SPAC19A8.12
著者She, M, Chen, N, Song, H.
登録日2005-07-04
公開日2005-12-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe
Nat.Struct.Mol.Biol., 13, 2006
2R5W
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Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase from Francisella tularensis
分子名称: CHLORIDE ION, MAGNESIUM ION, Nicotinamide-nucleotide adenylyltransferase
著者Huang, N, Sorci, L, Zhang, X, Brautigan, C, Li, X, Raffaelli, N, Grishin, N, Osterman, A, Zhang, H.
登録日2007-09-04
公開日2008-03-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
3Q4I
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Crystal structure of CDP-Chase in complex with Gd3+
分子名称: GADOLINIUM ION, Phosphohydrolase (MutT/nudix family protein)
著者Duong-Ly, K.C, Gabelli, S.B, Amzel, L.M.
登録日2010-12-23
公開日2011-07-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Nudix Hydrolase CDP-Chase, a CDP-Choline Pyrophosphatase, Is an Asymmetric Dimer with Two Distinct Enzymatic Activities.
J.Bacteriol., 193, 2011
6M65
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BU of 6m65 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with GMPPNP (GDP)
分子名称: 1,2-ETHANEDIOL, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Raj, P, Karthik, S, Arif, S.M, Varshney, U, Vijayan, M.
登録日2020-03-13
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Plasticity, ligand conformation and enzyme action of Mycobacterium smegmatis MutT1.
Acta Crystallogr D Struct Biol, 76, 2020
6M69
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Crystal structure of Mycobacterium smegmatis MutT1 in complex with GMPPCP (GDP)
分子名称: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, Hydrolase, ...
著者Raj, P, Karthik, S, Arif, S.M, Varshney, U, Vijayan, M.
登録日2020-03-13
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Plasticity, ligand conformation and enzyme action of Mycobacterium smegmatis MutT1.
Acta Crystallogr D Struct Biol, 76, 2020
6M6Y
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BU of 6m6y by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGTP
分子名称: 1,2-ETHANEDIOL, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Hydrolase, ...
著者Raj, P, Karthik, S, Arif, S.M, Varshney, U, Vijayan, M.
登録日2020-03-16
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Plasticity, ligand conformation and enzyme action of Mycobacterium smegmatis MutT1.
Acta Crystallogr D Struct Biol, 76, 2020
6M72
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Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGDP
分子名称: 2'-deoxy-8-oxoguanosine 5'-(trihydrogen diphosphate), Hydrolase, NUDIX family protein, ...
著者Raj, P, Karthik, S, Arif, S.M, Varshney, U, Vijayan, M.
登録日2020-03-16
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Plasticity, ligand conformation and enzyme action of Mycobacterium smegmatis MutT1.
Acta Crystallogr D Struct Biol, 76, 2020
5J3T
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BU of 5j3t by Molmil
Crystal structure of S. pombe Dcp2:Dcp1:Edc1 mRNA decapping complex
分子名称: Edc1, FORMIC ACID, MAGNESIUM ION, ...
著者Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
登録日2016-03-31
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
5IW4
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BU of 5iw4 by Molmil
Crystal structure of E. coli NudC in complex with NAD
分子名称: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Li, S, Du, J, Patel, D.J.
登録日2016-03-22
公開日2016-07-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of the bacterial decapping enzyme NudC.
Nat.Chem.Biol., 12, 2016
6NCI
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BU of 6nci by Molmil
Crystal structure of CDP-Chase: Vector data collection
分子名称: D-ribose, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
著者Miller, M.S, Shi, W, Gabelli, S.B.
登録日2018-12-11
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Getting the Most Out of Your Crystals: Data Collection at the New High-Flux, Microfocus MX Beamlines at NSLS-II.
Molecules, 24, 2019
5J3Y
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BU of 5j3y by Molmil
Crystal structure of S. pombe Dcp2:Dcp1 mRNA decapping complex
分子名称: mRNA decapping complex subunit 2, mRNA-decapping enzyme subunit 1
著者Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
登録日2016-03-31
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.288 Å)
主引用文献Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
5ISY
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BU of 5isy by Molmil
Crystal structure of Nudix family protein with NAD
分子名称: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Zhang, D, Guan, Z, Zou, T, Yin, P.
登録日2016-03-15
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.354 Å)
主引用文献Structural basis of prokaryotic NAD-RNA decapping by NudC
Cell Res., 26, 2016
6NCH
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BU of 6nch by Molmil
Crystal structure of CDP-Chase: Raster data collection
分子名称: D-ribose, PHOSPHATE ION, Phosphohydrolase (MutT/nudix family protein), ...
著者Miller, M.S, Shi, W, Gabelli, S.B.
登録日2018-12-11
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Getting the Most Out of Your Crystals: Data Collection at the New High-Flux, Microfocus MX Beamlines at NSLS-II.
Molecules, 24, 2019
3Q1P
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BU of 3q1p by Molmil
Crystal structure of CDP-Chase
分子名称: Phosphohydrolase (MutT/nudix family protein), SULFATE ION
著者Duong-Ly, K.C, Gabelli, S.B, Amzel, L.M.
登録日2010-12-17
公開日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Nudix Hydrolase CDP-Chase, a CDP-Choline Pyrophosphatase, Is an Asymmetric Dimer with Two Distinct Enzymatic Activities.
J.Bacteriol., 193, 2011
5IW5
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BU of 5iw5 by Molmil
Crystal structure of E. coli NudC in complex with NMN
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NADH pyrophosphatase, ZINC ION
著者Li, S, Du, J, Patel, D.J.
登録日2016-03-22
公開日2016-07-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure and function of the bacterial decapping enzyme NudC
Nat.Chem.Biol., 12, 2016
2QKM
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The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, SPAC19A8.12 protein, SPBC3B9.21 protein
著者She, M, Song, H.
登録日2007-07-11
公開日2008-04-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
2QJO
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crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Bifunctional NMN adenylyltransferase/Nudix hydrolase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
登録日2007-07-08
公開日2008-03-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
5XD1
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Crystal structure of Mycobacterium smegmatis MutT1 in complex with Ap5A, ATP and magnesium
分子名称: ADENOSINE-5'-PENTAPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Arif, S.M, Varshney, U, Vijayan, M.
登録日2017-03-24
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Hydrolysis of diadenosine polyphosphates. Exploration of an additional role of Mycobacterium smegmatis MutT1
J. Struct. Biol., 199, 2017

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