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PDB: 1515 件

3N32
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The crystal structure of human Ubiquitin adduct with Zeise's salt
分子名称: PLATINUM (II) ION, Ubiquitin
著者Siliqi, D, Caliandro, R, Falini, G, Fermani, S, Natile, G, Arnesano, F, Belviso, B.D.
登録日2010-05-19
公開日2011-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.795 Å)
主引用文献Crystallographic analysis of metal-ion binding to human ubiquitin.
Chemistry, 17, 2011
3ALB
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Cyclic Lys48-linked tetraubiquitin
分子名称: SULFATE ION, ubiquitin
著者Satoh, T, Sakata, E, Yamamoto, S, Yamaguchi, Y, Sumiyoshi, A, Wakatsuki, S, Kato, K.
登録日2010-07-29
公開日2010-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of cyclic Lys48-linked tetraubiquitin
Biochem.Biophys.Res.Commun., 2010
3AUL
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Crystal structure of wild-type Lys48-linked diubiquitin in an open conformation
分子名称: Polyubiquitin-C
著者Hirano, T, Olivier, S, Yagi, M, Takemoto, E, Hiromoto, T, Satoh, T, Mizushima, T, Kato, K.
登録日2011-02-09
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Conformational dynamics of wild-type Lys48-linked diubiquitin in solution
J.Biol.Chem., 286, 2011
3A9K
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Crystal structure of the mouse TAB3-NZF in complex with Lys63-linked di-ubiquitin
分子名称: Mitogen-activated protein kinase kinase kinase 7-interacting protein 3, Ubiquitin, ZINC ION
著者Sato, Y, Yoshikawa, A, Yamashita, M, Yamagata, A, Fukai, S.
登録日2009-10-29
公開日2009-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by NZF domains of TAB2 and TAB3
Embo J., 28, 2009
3AXC
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Crystal structure of linear diubiquitin
分子名称: GLYCEROL, Ubiquitin
著者Rohaim, A, Kawasaki, M, Kato, R, Dikic, I, Wakatsuki, S.
登録日2011-04-01
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structure of a compact conformation of linear diubiquitin
Acta Crystallogr.,Sect.D, 68, 2012
3B0A
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Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin
分子名称: Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, TRIS(HYDROXYETHYL)AMINOMETHANE, ...
著者Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S.
登録日2011-06-07
公開日2011-12-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex
Proc.Natl.Acad.Sci.USA, 108, 2011
2ZCC
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Ubiquitin crystallized under high pressure
分子名称: Ubiquitin, ZINC ION
著者Kitahara, R, Tanaka, T, Yamashita, M, Araya, K, Yokoyama, S, Akasaka, K, Taniguchi, Y, Kato, M.
登録日2007-11-08
公開日2007-11-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of Ubiquitin crystallized under high pressure
to be published
2ZEQ
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Crystal structure of ubiquitin-like domain of murine Parkin
分子名称: E3 ubiquitin-protein ligase parkin
著者Tomoo, K.
登録日2007-12-14
公開日2008-08-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure and molecular dynamics simulation of ubiquitin-like domain of murine parkin
Biochim.Biophys.Acta, 1784, 2008
3NS8
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Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Ubiquitin
著者Zhang, D, LaRonde-LeBlanc, N, Fushman, D.
登録日2010-07-01
公開日2011-07-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.707 Å)
主引用文献Structural and biochemical studies of the open state of Lys48-linked diubiquitin.
Biochim.Biophys.Acta, 1823, 2012
3NOB
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Structure of K11-linked di-ubiquitin
分子名称: SULFATE ION, Ubiquitin
著者Dong, K.C, Matsumoto, M.L, Hymowitz, S.G.
登録日2010-06-25
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献K11-Linked Polyubiquitination in Cell Cycle Control Revealed by a K11 Linkage-Specific Antibody.
Mol.Cell, 39, 2010
3OJ3
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Crystal structure of the A20 ZnF4 and ubiquitin complex
分子名称: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, ZINC ION
著者Bosanac, I, Hymowitz, S.G.
登録日2010-08-20
公開日2010-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-KB Signaling
Mol.Cell, 40, 2010
3B1L
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Crystal Structure of parkin ubiquitin-like domain R33Q mutant
分子名称: E3 ubiquitin-protein ligase parkin
著者Tomoo, K, Ikemiya, A, Amami, Y, In, Y, Ishida, T.
登録日2011-07-04
公開日2012-07-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of parkin ubiquitin-like domain R33Q mutant
to be published
1WX9
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Solution Structure of the N-terminal Ubiquitin-like Domain in the Human BAT3 Protein
分子名称: HLA-B associated transcript-3 isoform b
著者Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-20
公開日2005-07-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the N-terminal Ubiquitin-like Domain in the Human BAT3 Protein
To be Published
1WE6
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Solution structure of Ubiquitin-like domain in splicing factor AAL91182
分子名称: splicing factor, putative
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-24
公開日2004-11-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of Ubiquitin-like domain in splicing factor AAL91182
To be Published
1WIA
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BU of 1wia by Molmil
Solution structure of mouse hypothetical ubiquitin-like protein BAB25500
分子名称: hypothetical ubiquitin-like protein (RIKEN cDNA 2010008E23)
著者Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Hayashi, F, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of mouse hypothetical ubiquitin-like protein BAB25500
To be Published
1WGD
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BU of 1wgd by Molmil
Solution structure of the Ubl-domain of Herp
分子名称: Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
著者Nakanishi, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the Ubl-domain of Herp
To be Published
1WXV
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Solution structure of the ubiquitin domain of BCL-2 binding athanogene-1
分子名称: BAG-family molecular chaperone regulator-1
著者Niraula, T.N, Muto, Y, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-02
公開日2005-08-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the ubiquitin domain of BCL-2 binding athanogene-1
To be Published
1X1M
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BU of 1x1m by Molmil
Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132
分子名称: Ubiquitin-like protein SB132
著者Zhao, C, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-07
公開日2005-10-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132
To be Published
1WR1
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The complex structure of Dsk2p UBA with ubiquitin
分子名称: Ubiquitin, Ubiquitin-like protein DSK2
著者Ohno, A, Jee, J.G, Fujiwara, K, Tenno, T, Goda, N, Tochio, H, Hiroaki, H, kobayashi, H, Shirakawa, M.
登録日2004-10-08
公開日2005-04-19
最終更新日2023-09-27
実験手法SOLUTION NMR
主引用文献Structure of the UBA domain of Dsk2p in complex with ubiquitin molecular determinants for ubiquitin recognition.
Structure, 13, 2005
1WX8
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Solution Structure of the N-terminal Ubiquitin-like Domain in the 4931431F19Rik Protein
分子名称: RIKEN cDNA 4931431F19
著者Zhao, C, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-20
公開日2005-07-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the N-terminal Ubiquitin-like Domain in the 4931431F19Rik Protein
To be Published
1WE7
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Solution structure of Ubiquitin-like domain in SF3a120
分子名称: Sf3a1 protein
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-24
公開日2004-11-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of Ubiquitin-like domain in SF3a120
To be Published
1WH3
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Solution structure of C-terminal ubiquitin like domain of human 2'-5'-oligoadenylate synthetase-like protain (p59 OASL)
分子名称: 59 kDa 2'-5'-oligoadenylate synthetase like protein
著者Tochio, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of C-terminal ubiquitin like domain of human 2'-5'-oligoadenylate synthetase-like protain (p59 OASL)
To be Published
1WX7
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Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3)
分子名称: Ubiquilin 3
著者Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-20
公開日2005-07-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3)
To be Published
1WY8
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Solution Structure of the N-terminal Ubiquitin-like Domain in Human Np95/ICBP90-like Ring Finger Protein (NIRF)
分子名称: Np95-like ring finger protein, isoform a
著者Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-09
公開日2005-08-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the N-terminal Ubiquitin-like Domain in Human Np95/ICBP90-like Ring Finger Protein (NIRF)
To be Published
7NPO
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Branched K48-K63-Ub3
分子名称: GLYCEROL, Polyubiquitin-B
著者Lange, S.M, Kwasna, D, Kulathu, Y.
登録日2021-02-27
公開日2022-08-10
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献VCP/p97-associated proteins are binders and debranching enzymes of K48-K63-branched ubiquitin chains.
Nat.Struct.Mol.Biol., 2024

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件を2024-07-31に公開中

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