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PDB: 13 件

7W3N
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BU of 7w3n by Molmil
Crystal structure of Ufm1 fused to UFBP1 UFIM
分子名称: UFBP1 peptide,Ubiquitin-fold modifier 1
著者Noda, N.N.
登録日2021-11-25
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The UFM1 system regulates ER-phagy through the ufmylation of CYB5R3.
Nat Commun, 13, 2022
8BZR
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BU of 8bzr by Molmil
UFC1-UFM1 conjugate
分子名称: 1,2-ETHANEDIOL, Ubiquitin-fold modifier 1, Ubiquitin-fold modifier-conjugating enzyme 1
著者Magnussen, H.M, Kulathu, Y.
登録日2022-12-15
公開日2023-12-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.781 Å)
主引用文献The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons.
Nature, 627, 2024
5IAA
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BU of 5iaa by Molmil
Crystal structure of human UBA5 in complex with UFM1
分子名称: Ubiquitin-fold modifier 1, Ubiquitin-like modifier-activating enzyme 5, ZINC ION
著者Oweis, W, Padala, P, Wiener, R.
登録日2016-02-21
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Trans-Binding Mechanism of Ubiquitin-like Protein Activation Revealed by a UBA5-UFM1 Complex.
Cell Rep, 16, 2016
5IA8
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BU of 5ia8 by Molmil
Structure of a Ubiquitin like protein with an E1 fragment
分子名称: Ubiquitin-like modifier-activating enzyme 5,Ubiquitin-fold modifier 1
著者Oweis, W, Padala, P, Wiener, R.
登録日2016-02-21
公開日2017-03-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel insights into the interaction of UBA5 with UFM1 via a UFM1-interacting sequence.
Sci Rep, 7, 2017
5IA7
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BU of 5ia7 by Molmil
Crystal structure of Ubiquitin fold modifier 1 (Ufm1)
分子名称: Ubiquitin-fold modifier 1
著者Padala, P, Oweis, W, Wiener, R.
登録日2016-02-21
公開日2017-03-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel insights into the interaction of UBA5 with UFM1 via a UFM1-interacting sequence.
Sci Rep, 7, 2017
6H77
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BU of 6h77 by Molmil
E1 enzyme for ubiquitin like protein activation in complex with UBL
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Soudah, N, Padala, P, Hassouna, F, Mashahreh, B, Lebedev, A.A, Isupov, M.N, Cohen-Kfir, E, Wiener, R.
登録日2018-07-30
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An N-Terminal Extension to UBA5 Adenylation Domain Boosts UFM1 Activation: Isoform-Specific Differences in Ubiquitin-like Protein Activation.
J.Mol.Biol., 431, 2019
5L95
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Crystal structure of human UBA5 in complex with UFM1 and AMP
分子名称: ADENOSINE MONOPHOSPHATE, Ubiquitin-fold modifier 1, Ubiquitin-like modifier-activating enzyme 5, ...
著者Oweis, W, Padala, P, Wiener, R.
登録日2016-06-09
公開日2016-09-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Trans-Binding Mechanism of Ubiquitin-like Protein Activation Revealed by a UBA5-UFM1 Complex.
Cell Rep, 16, 2016
5HKH
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Crystal structure of Ufm1 in complex with UBA5
分子名称: ASP-ASN-GLU-TRP-GLY-ILE-GLU-LEU-VAL, Ubiquitin-fold modifier 1
著者Huber, J, Doetsch, V, Rogov, V.V, Akutsu, M.
登録日2016-01-14
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and Functional Analysis of a Novel Interaction Motif within UFM1-activating Enzyme 5 (UBA5) Required for Binding to Ubiquitin-like Proteins and Ufmylation.
J.Biol.Chem., 291, 2016
8OJ5
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BU of 8oj5 by Molmil
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Penchev, I, DaRosa, P.A, Peter, J.J, Kulathu, Y, Becker, T, Beckmann, R, Kopito, R.
登録日2023-03-23
公開日2024-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8OHD
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BU of 8ohd by Molmil
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R.
登録日2023-03-21
公開日2024-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8QFC
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BU of 8qfc by Molmil
UFL1 E3 ligase bound 60S ribosome
分子名称: 60S ribosomal protein L10a, CDK5 regulatory subunit-associated protein 3, DDRGK domain-containing protein 1, ...
著者Makhlouf, L, Zeqiraj, E, Kulathu, Y.
登録日2023-09-04
公開日2024-02-21
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons.
Nature, 627, 2024
8OJ0
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BU of 8oj0 by Molmil
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R.
登録日2023-03-23
公開日2024-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
1WXS
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BU of 1wxs by Molmil
Solution Structure of Ufm1, a ubiquitin-fold modifier
分子名称: Ubiquitin-fold Modifier 1
著者Sasakawa, H, Sakata, E, Yamaguchi, Y, Komatsu, M, Tatsumi, K, Kominami, E, Tanaka, K, Kato, K.
登録日2005-02-01
公開日2006-04-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier 1
Biochem.Biophys.Res.Commun., 343, 2006

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件を2024-07-31に公開中

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