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PDB: 15 件
1ZI0
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BU of 1zi0 by Molmil
A Superhelical Spiral in Escherichia coli DNA Gyrase A C-terminal Domain Imparts Unidirectional Supercoiling Bias
分子名称: DNA gyrase subunit A
著者Ruthenburg, A.J, Graybosch, D.M, Huetsch, J.C, Verdine, G.L.
登録日2005-04-26
公開日2005-05-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A superhelical spiral in the Escherichia coli DNA gyrase A C-terminal domain imparts unidirectional supercoiling bias
J.Biol.Chem., 280, 2005
1X75
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BU of 1x75 by Molmil
CcdB:GyrA14 complex
分子名称: Cytotoxic protein ccdB, DNA gyrase subunit A
著者Dao-Thi, M.H, Van Melderen, L, De Genst, E, Wyns, L, Loris, R.
登録日2004-08-13
公開日2005-05-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular Basis of Gyrase Poisoning by the Addiction Toxin CcdB
J.Mol.Biol., 348, 2005
1AB4
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BU of 1ab4 by Molmil
59KDA FRAGMENT OF GYRASE A FROM E. COLI
分子名称: GYRASE A
著者Cabral, J.H.M, Maxwell, A, Liddington, R.C.
登録日1997-02-03
公開日1998-10-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the breakage-reunion domain of DNA gyrase.
Nature, 388, 1997
8QQS
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BU of 8qqs by Molmil
E. coli DNA gyrase bound to a linear part of a DNA minicircle
分子名称: DNA (30-MER), DNA gyrase subunit A, DNA gyrase subunit B
著者Vayssieres, M, Lamour, V.
登録日2023-10-06
公開日2024-04-10
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of DNA crossover capture by Escherichia coli DNA gyrase.
Science, 384, 2024
8QQU
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BU of 8qqu by Molmil
Asymetric subunit of E. coli DNA gyrase bound to a linear part of a DNA minicircle
分子名称: DNA (16-MER), DNA gyrase subunit A, DNA gyrase subunit B
著者Vayssieres, M, Lamour, V.
登録日2023-10-06
公開日2024-04-10
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of DNA crossover capture by Escherichia coli DNA gyrase.
Science, 384, 2024
8QDX
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BU of 8qdx by Molmil
E. coli DNA gyrase bound to a DNA crossover
分子名称: DNA gyrase subunit A, DNA gyrase subunit B, DNA minicircle
著者Vayssieres, M, Lamour, V.
登録日2023-08-30
公開日2024-04-10
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of DNA crossover capture by Escherichia coli DNA gyrase.
Science, 384, 2024
7Z9C
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BU of 7z9c by Molmil
E.coli gyrase holocomplex with 217 bp DNA and albicidin
分子名称: DNA (5'-D(*AP*AP*TP*CP*AP*CP*CP*CP*GP*CP*AP*CP*AP*GP*AP*TP*TP*T)-3'), DNA (5'-D(*GP*AP*TP*TP*TP*TP*AP*TP*GP*CP*CP*TP*GP*AP*TP*TP*CP*T)-3'), DNA (5'-D(P*AP*AP*AP*TP*CP*TP*GP*TP*GP*CP*GP*GP*GP*T)-3'), ...
著者Ghilarov, D, Heddle, J.G.H, Suessmuth, R.
登録日2022-03-21
公開日2023-02-15
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Molecular mechanism of topoisomerase poisoning by the peptide antibiotic albicidin.
Nat Catal, 6, 2023
3NUH
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BU of 3nuh by Molmil
A domain insertion in E. coli GyrB adopts a novel fold that plays a critical role in gyrase function
分子名称: DNA gyrase subunit A, DNA gyrase subunit B, MAGNESIUM ION
著者Schoeffler, A.J, May, A.P, Berger, J.M.
登録日2010-07-06
公開日2010-08-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.103 Å)
主引用文献A domain insertion in Escherichia coli GyrB adopts a novel fold that plays a critical role in gyrase function.
Nucleic Acids Res., 38, 2010
7Z9G
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E.coli gyrase holocomplex with 217 bp DNA and Albi-2
分子名称: 4-[[3-(2-azanylethoxy)-2-oxidanyl-4-[[5-[[(2~{S})-2-[[4-[(6-oxidanylnaphthalen-2-yl)carbonylamino]phenyl]carbonylamino]-3-(1~{H}-1,2,3-triazol-4-yl)propanoyl]amino]pyridin-2-yl]carbonylamino]phenyl]carbonylamino]-3-methoxy-2-oxidanyl-benzoic acid, DNA (5'-D(*AP*AP*TP*CP*AP*CP*CP*CP*GP*CP*AP*CP*AP*GP*AP*TP*TP*T)-3'), DNA (5'-D(*GP*AP*TP*TP*TP*TP*AP*TP*GP*CP*CP*TP*GP*AP*TP*TP*CP*T)-3'), ...
著者Ghilarov, D, Heddle, J.G.H.
登録日2022-03-21
公開日2023-02-15
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Molecular mechanism of topoisomerase poisoning by the peptide antibiotic albicidin.
Nat Catal, 6, 2023
7Z9K
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E.coli gyrase holocomplex with 217 bp DNA and Albi-1 (site TG)
分子名称: 4-[[4-[[5-[[(2S)-2-[[5-[(4-cyanophenyl)carbonylamino]pyridin-2-yl]carbonylamino]-3-(1H-1,2,3-triazol-4-yl)propanoyl]amino]pyridin-2-yl]carbonylamino]-2-oxidanyl-3-propan-2-yloxy-phenyl]carbonylamino]benzoic acid, DNA (5'-D(*AP*AP*TP*CP*AP*CP*CP*CP*GP*CP*AP*CP*AP*GP*AP*TP*TP*T)-3'), DNA (5'-D(*GP*AP*TP*TP*TP*TP*AP*TP*GP*CP*CP*TP*GP*AP*TP*TP*CP*T)-3'), ...
著者Ghilarov, D, Heddle, J.G.H.
登録日2022-03-21
公開日2023-03-08
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Molecular mechanism of topoisomerase poisoning by the peptide antibiotic albicidin.
Nat Catal, 6, 2023
7Z9M
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BU of 7z9m by Molmil
E.coli gyrase holocomplex with 217 bp DNA and Albi-1 (site AA)
分子名称: 4-[[4-[[5-[[(2S)-2-[[5-[(4-cyanophenyl)carbonylamino]pyridin-2-yl]carbonylamino]-3-(1H-1,2,3-triazol-4-yl)propanoyl]amino]pyridin-2-yl]carbonylamino]-2-oxidanyl-3-propan-2-yloxy-phenyl]carbonylamino]benzoic acid, DNA (5'-D(*AP*AP*TP*CP*AP*CP*CP*CP*GP*CP*AP*CP*AP*GP*AP*TP*TP*T)-3'), DNA (5'-D(*GP*AP*TP*TP*TP*TP*AP*TP*GP*CP*CP*TP*GP*AP*TP*TP*CP*T)-3'), ...
著者Ghilarov, D, Heddle, J.G.H.
登録日2022-03-21
公開日2023-02-15
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular mechanism of topoisomerase poisoning by the peptide antibiotic albicidin.
Nat Catal, 6, 2023
6RKS
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BU of 6rks by Molmil
E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 without TOPRIM insertion
分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA Strand 1, DNA Strand 2, ...
著者Vanden Broeck, A, Lamour, V.
登録日2019-04-30
公開日2019-11-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex.
Nat Commun, 10, 2019
6RKU
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BU of 6rku by Molmil
E. coli DNA Gyrase - DNA binding and cleavage domain in State 1
分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA Strand 1, DNA Strand 2, ...
著者Vanden Broeck, A, Lamour, V.
登録日2019-04-30
公開日2019-11-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex.
Nat Commun, 10, 2019
6RKV
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BU of 6rkv by Molmil
E. coli DNA Gyrase - DNA binding and cleavage domain in State 2
分子名称: DNA Strand 1, DNA Strand 2, DNA gyrase subunit A, ...
著者Vanden Broeck, A, Lamour, V.
登録日2019-04-30
公開日2019-11-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex.
Nat Commun, 10, 2019
6RKW
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BU of 6rkw by Molmil
CryoEM structure of the complete E. coli DNA Gyrase complex bound to a 130 bp DNA duplex
分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA (58-MER), DNA (62-MER), ...
著者Vanden Broeck, A, Lamour, V.
登録日2019-04-30
公開日2019-11-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex.
Nat Commun, 10, 2019

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件を2024-07-10に公開中

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