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PDB: 37 件

1VYO
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Crystal structure of avidin
分子名称: AVIDIN, GLYCEROL
著者Airenne, T.T, Johnson, M.S, Salminen, T.A.
登録日2004-05-03
公開日2005-07-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Binding Properties of Haba-Type Azo Derivatives to Avidin and Avidin-Related Protein 4.
Chem.Biol., 13, 2006
6XND
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Avidin-Biotin-Phenol
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, N-[2-(2-hydroxy-5-nitrophenyl)ethyl]-5-[(3aS,4S,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide
著者Ahmadvand, P, Kang, C.
登録日2020-07-02
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献A Ligand-Directed Nitrophenol Carbonate for Transient in situ Bioconjugation and Drug Delivery
Chemmedchem, 15, 2020
3VGW
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Crystal structure of monoAc-biotin-avidin complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(3aS,4S,6aR)-1-acetyl-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid, Avidin, ...
著者Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T.
登録日2011-08-21
公開日2011-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rational development of caged-biotin protein-labeling agents and some applications in live cells
Chem.Biol., 18, 2011
3VHI
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Crystal structure of monoZ-biotin-avidin complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-{(3aS,4S,6aR)-1-[(benzyloxy)carbonyl]-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl}pentanoic acid, Avidin, ...
著者Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T.
登録日2011-08-25
公開日2011-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Rational development of caged-biotin protein-labeling agents and some applications in live cells
Chem.Biol., 18, 2011
1NQN
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Structure of Avm-W110K (W110K mutant of avidin)
分子名称: Avidin
著者Pazy, Y, Eisenberg-Domovich, Y, Laitinen, O.H, Kulomaa, M.S, Bayer, E.A, Wilchek, M, Livnah, O.
登録日2003-01-22
公開日2003-07-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Dimer-Tetramer Transition between Solution and Crystalline States of Streptavidin and Avidin Mutants.
J.Bacteriol., 185, 2003
5MYQ
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Crystal structure of avidin in complex with ferrocene homobiotin derivative
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, IODIDE ION, ...
著者Strzelczyk, P, Bujacz, G.
登録日2017-01-27
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural investigation of the interactions of ferrocene homobiotin derivative with avidin.
To Be Published
2JGS
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Circular permutant of avidin
分子名称: BIOTIN, CIRCULAR PERMUTANT OF AVIDIN
著者Maatta, J.A.E, Hytonen, V.P, Airenne, T.T, Niskanen, E, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R.
登録日2007-02-14
公開日2008-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rational Modification of Ligand-Binding Preference of Avidin by Circular Permutation and Mutagenesis.
Chembiochem, 9, 2008
4U46
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Crystal structure of an avidin mutant
分子名称: Avidin, CHLORIDE ION
著者Agrawal, N, Lehtonen, S, Kahkonen, N, Riihimaki, T, Hytonen, V.P, Kulomaa, M.S, Johnson, M.S, Airenne, T.T.
登録日2014-07-23
公開日2015-08-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Artificial Avidin-Based Receptors for a Panel of Small Molecules.
Acs Chem.Biol., 11, 2016
2C4I
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Crystal structure of engineered avidin
分子名称: AVIDIN, BIOTIN, SULFATE ION
著者Hytonen, V.P, Horha, J, Airenne, T.T, Niskanen, E.A, Helttunen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Nordlund, H.R.
登録日2005-10-19
公開日2006-07-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Controlling Quaternary Structure Assembly: Subunit Interface Engineering and Crystal Structure of Dual Chain Avidin.
J.Mol.Biol., 359, 2006
4JHQ
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Crystal structure of avidin - 6-(6-biotinamidohexanamido)hexanoylferrocene complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,5-eta)-{6-[(6-{[5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanoyl]amino}hexanoyl)amino]hexanoyl}cyclopentadienyl]iron
著者Strzelczyk, P, Bujacz, A, Bujacz, G.
登録日2013-03-05
公開日2013-11-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Ferrocene-Biotin Conjugates Targeting Cancer Cells: Synthesis, Interaction with Avidin, Cytotoxic Properties and the Crystal Structure of the Complex of Avidin with a Biotin-Linker-Ferrocene Conjugate
Organometallics, 32, 2013
2A8G
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Structure of Avidin in complex with the ligand deoxyguanosine
分子名称: 2'-DEOXY-GUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Conners, R, Hooley, E, Thomas, S, Brady, R.L.
登録日2005-07-08
公開日2006-05-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Recognition of oxidatively modified bases within the biotin-binding site of avidin.
J.Mol.Biol., 357, 2006
3VHM
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Crystal structure of NPC-biotin-avidin complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(3aS,4R,6aR)-1-{[(1R)-1-(6-nitro-1,3-benzodioxol-5-yl)ethoxy]carbonyl}-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid, Avidin, ...
著者Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T.
登録日2011-08-29
公開日2011-12-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational development of caged-biotin protein-labeling agents and some applications in live cells
Chem.Biol., 18, 2011
5IRU
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Crystal structure of avidin in complex with 1-biotinylpyrene
分子名称: 1-biotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Strzelczyk, P, Bujacz, G.
登録日2016-03-14
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene.
Molecules, 21, 2016
1IJ8
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CRYSTAL STRUCTURE OF LITE AVIDIN-BNI COMPLEX
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, AVIDIN
著者Livnah, O, Huberman, T.
登録日2001-04-25
公開日2001-09-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chicken avidin exhibits pseudo-catalytic properties. Biochemical, structural, and electrostatic consequences.
J.Biol.Chem., 276, 2001
7ZYL
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Avidin + Biotin-Tempo
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, Avidin
著者Milani, J, Myasnikov, A, Beckert, B, Nazarov, S, Ansermet, J.P, Saenz, F.
登録日2022-05-25
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Avidin + Biotin-Tempo
To Be Published
5IRW
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Crystal structure of avidin in complex with 1-desthiobiotinylpyrene
分子名称: 1-desthiobiotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Strzelczyk, P, Bujacz, G.
登録日2016-03-14
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene.
Molecules, 21, 2016
7P4Z
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Crystal structure of avidin from hen egg white in space group C2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Bellini, D, Gorrec, F.
登録日2021-07-13
公開日2021-08-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The FUSION protein crystallization screen.
J.Appl.Crystallogr., 55, 2022
8CK7
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Avidin complexed to theophylline
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, GLYCEROL, ...
著者De March, M.
登録日2023-02-14
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The avidin-theophylline complex: A structural and computational study.
Proteins, 91, 2023
2CAM
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AVIDIN MUTANT (K3E,K9E,R26D,R124L)
分子名称: AVIDIN
著者Rosano, C, Arosio, P, Bolognesi, M.
登録日1998-03-27
公開日1998-07-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biochemical characterization and crystal structure of a recombinant hen avidin and its acidic mutant expressed in Escherichia coli.
Eur.J.Biochem., 256, 1998
1RAV
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RECOMBINANT AVIDIN
分子名称: AVIDIN
著者Rosano, C, Arosio, P, Bolognesi, M.
登録日1998-03-27
公開日1998-07-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biochemical characterization and crystal structure of a recombinant hen avidin and its acidic mutant expressed in Escherichia coli.
Eur.J.Biochem., 256, 1998
1LDO
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avidin-norbioitn complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, NORBIOTIN, avidin
著者Pazy, Y, Kulik, T, Bayer, E.A, Wilchek, M, Livnah, O.
登録日2002-04-09
公開日2002-11-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Ligand exchange between proteins: exchange of biotin and biotin derivatives between avidin and streptavidin
J.Biol.Chem., 277, 2002
5CHK
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Crystal structure of avidin - HABA complex (hexagonal crystal form)
分子名称: 2-[2-(4-oxocyclohexa-2,5-dien-1-ylidene)hydrazinyl]benzoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Strzelczyk, P, Bujacz, A, Bujacz, G.
登録日2015-07-10
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure and ligand affinity of avidin in the complex with 4-hydroxyazobenzene-2-carboxylic acid
J.Mol.Struct., 1109, 2016
3VHH
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Crystal structure of DiMe-biotin-avidin complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(3aS,4S,6aR)-1,3-dimethyl-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid, Avidin, ...
著者Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T.
登録日2011-08-25
公開日2011-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Rational development of caged-biotin protein-labeling agents and some applications in live cells
Chem.Biol., 18, 2011
7ZN1
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Avidin + Biotin-Tempo
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, ...
著者Milani, J, Lau, K, Pojer, F, Ansermet, J.P, Saenz, F.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Avidin + Biotin-Tempo
To Be Published
2A5B
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Avidin complexed with 8-oxodeoxyguanosine
分子名称: 2'-DEOXY-8-OXOGUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
著者Conners, R, Hooley, E, Thomas, S, Brady, R.L.
登録日2005-06-30
公開日2006-05-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Recognition of oxidatively modified bases within the biotin-binding site of avidin.
J.Mol.Biol., 357, 2006

 

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