PDB: 54296 resultsInfo pagesStatus searchChemie searchBIRD

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5W2K	Crystal structure of mutant CJ YCEI protein (CJ-G34C) with hydroxymercuribenzoic acid guest structure Descriptor: MERCURIBENZOIC ACID, Polyisoprenoid-binding protein, SULFATE ION, ... Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-06 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.78 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
5W2R	Crystal structure of mutant CJ YCEI protein (CJ-G34C) with 5-mercapto-2-nitrobenzoic acid guest structure Descriptor: 5-MERCAPTO-2-NITRO-BENZOIC ACID, Polyisoprenoid-binding protein, SULFATE ION, ... Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-06 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
5W2X	Crystal structure of mutant CJ YCEI protein (CJ-N48C) for nanotechnology applications Descriptor: Polyisoprenoid-binding protein, SULFATE ION, UNKNOWN LIGAND Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-07 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.73 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
5W31	Crystal structure of mutant CJ YCEI protein (CJ-N48C) with mercuribenzoic acid guest structure Descriptor: MERCURIBENZOIC ACID, Putative periplasmic protein, SULFATE ION, ... Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-07 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.56 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
5W3B	Crystal structure of mutant CJ YCEI protein (CJ-N182C) with mercuribenzoic acid guest structure Descriptor: EICOSANE, MERCURIBENZOIC ACID, Polyisoprenoid-binding protein, ... Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-07 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
3QDL	Crystal structure of RdxA from Helicobacter pyroli Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Oxygen-insensitive NADPH nitroreductase Authors: Rojas, A.L, Martinez-Julvez, M, Olekhnovich, I.N, Hoffman, P.S, Sancho, J. Deposit date: 2011-01-18 Release date: 2012-01-18 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of RdxA--an oxygen-insensitive nitroreductase essential for metronidazole activation in Helicobacter pylori. Febs J., 279, 2012
5W37	Crystal structure of mutant CJ YCEI protein (CJ-N182C) for nanotechnology applications Descriptor: EICOSANE, Polyisoprenoid-binding protein, SULFATE ION Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-07 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.52 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
3QSI	Nickel binding domain of NikR from Helicobacter pylori disclosing partial metal occupancy Descriptor: NICKEL (II) ION, NikR nickel-responsive regulator, SULFATE ION Authors: Gonzalez, J.M, Pozharski, E. Deposit date: 2011-02-21 Release date: 2012-04-04 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.08 Å) Cite: Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect. Proc.Natl.Acad.Sci.USA, 109, 2012
3PHH	Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, Shikimate dehydrogenase Authors: Cheng, W.C, Lin, S.C, Wang, W.C. Deposit date: 2010-11-04 Release date: 2011-11-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.42 Å) Cite: Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate To be Published
3PHG	Crystal structure of the Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori Descriptor: Shikimate dehydrogenase Authors: Cheng, W.C, Lin, S.C, Wang, W.C. Deposit date: 2010-11-04 Release date: 2011-11-09 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.57 Å) Cite: Crystal structure of the Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori To be Published
3PHI	Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Shikimate dehydrogenase Authors: Cheng, W.C, Lin, S.C, Wang, W.C. Deposit date: 2010-11-04 Release date: 2011-11-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH To be Published
3QXH	Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with ADP and 8-aminocaprylic acid Descriptor: 1,2-ETHANEDIOL, 8-aminooctanoic acid, ADENOSINE-5'-DIPHOSPHATE, ... Authors: Porebski, P.J, Klimecka, M.M, Chruszcz, M, Murzyn, K, Minor, C, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) Deposit date: 2011-03-01 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.36 Å) Cite: Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members. Febs J., 279, 2012
3QXJ	Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GTP Descriptor: 1,2-ETHANEDIOL, Dethiobiotin synthetase, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Klimecka, M.M, Porebski, P.J, Chruszcz, M, Murzyn, K, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) Deposit date: 2011-03-01 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.38 Å) Cite: Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members. Febs J., 279, 2012
3QY0	Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP Descriptor: 1,2-ETHANEDIOL, Dethiobiotin synthetase, GUANOSINE-5'-DIPHOSPHATE, ... Authors: Porebski, P.J, Klimecka, M.M, Chruszcz, M, Murzyn, K, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) Deposit date: 2011-03-02 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members. Febs J., 279, 2012
3QGA	3.0 A Model of Iron Containing Urease UreA2B2 from Helicobacter mustelae Descriptor: FE (III) ION, Fusion of urease beta and gamma subunits, Urease subunit beta 2 Authors: Tronrud, D.E, Robbins, A, Karplus, P.A. Deposit date: 2011-01-24 Release date: 2011-08-10 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (3 Å) Cite: Iron-containing urease in a pathogenic bacterium. Proc.Natl.Acad.Sci.USA, 108, 2011
3OQG	Restriction endonuclease HPY188I in complex with substrate DNA Descriptor: CHLORIDE ION, DNA 5'-D(*GP*AP*TP*CP*TP*GP*AP*AP*C)-3', DNA 5'-D(*GP*TP*TP*CP*AP*GP*AP*TP*C)-3', ... Authors: Sokolowska, M, Czapinska, H, Bochtler, M. Deposit date: 2010-09-03 Release date: 2010-10-20 Last modified: 2017-11-08 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis. Nucleic Acids Res., 39, 2011
5W39	Crystal structure of mutant CJ YCEI protein (CJ-N182C) with monobromobimane guest structure Descriptor: 3-(bromomethyl)-2,5,6-trimethyl-1H,7H-pyrazolo[1,2-a]pyrazole-1,7-dione, EICOSANE, Polyisoprenoid-binding protein, ... Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-07 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
5W3A	Crystal structure of mutant CJ YCEI protein (CJ-N182C) with 5-mercapto-2-nitrobenzoic acid guest structure Descriptor: 5-MERCAPTO-2-NITRO-BENZOIC ACID, EICOSANE, Polyisoprenoid-binding protein, ... Authors: Huber, T.R, Snow, C.D. Deposit date: 2017-06-07 Release date: 2018-01-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.76 Å) Cite: Installing Guest Molecules at Specific Sites within Scaffold Protein Crystals. Bioconjug. Chem., 29, 2018
3QGK	3.0 A Model of Iron Containing Urease UreA2B2 from Helicobacter mustelae (refined w/ no ordered solvent) Descriptor: FE (III) ION, Fusion of urease beta and gamma subunits, Urease subunit beta 2 Authors: Tronrud, D.E, Robbins, A, Karplus, P.A. Deposit date: 2011-01-24 Release date: 2011-08-10 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (3 Å) Cite: Iron-containing urease in a pathogenic bacterium. Proc.Natl.Acad.Sci.USA, 108, 2011
3QXX	Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP and 8-aminocaprylic acid Descriptor: 1,2-ETHANEDIOL, 8-aminooctanoic acid, Dethiobiotin synthetase, ... Authors: Porebski, P.J, Klimecka, M.M, Chruszcz, M, Murzyn, K, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) Deposit date: 2011-03-02 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.36 Å) Cite: Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members. Febs J., 279, 2012
1R5G	Crystal Structure of MetAP2 complexed with A311263 Descriptor: (2S,3R)-3-AMINO-2-HYDROXY-5-(ETHYLSULFANYL)PENTANOYL-((S)-(-)-(1-NAPHTHYL)ETHYL)AMIDE, MANGANESE (II) ION, Methionine aminopeptidase 2 Authors: Sheppard, G.S, Wang, J, Kawai, M, BaMaung, N.Y, Craig, R.A, Erickson, S.A, Lynch, L, Patel, J, Yang, F, Searle, X.B, Lou, P, Park, C, Kim, K.H, Henkin, J, Lesniewski, R. Deposit date: 2003-10-10 Release date: 2004-10-12 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2 Å) Cite: 3-Amino-2-hydroxyamides and related compounds as inhibitors of methionine aminopeptidase-2. Bioorg.Med.Chem.Lett., 14, 2004
3O1Q	Native Crystal Structure of Helicobacter pylori Urease Accessory Protein UreF Descriptor: Urease accessory protein ureF Authors: Fong, Y.H, Chen, Y.W, Wong, K.B. Deposit date: 2010-07-21 Release date: 2010-08-18 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Assembly of Preactivation Complex for Urease Maturation in Helicobacter pylori: CRYSTAL STRUCTURE OF UreF-UreH PROTEIN COMPLEX. J.Biol.Chem., 286, 2011
1QXW	Crystal structure of Staphyloccocus aureus in complex with an aminoketone inhibitor 54135. Descriptor: (3S)-3-AMINO-1-(CYCLOPROPYLAMINO)HEPTANE-2,2-DIOL, ACETATE ION, COBALT (II) ION, ... Authors: Douangamath, A, Dale, G.E, D'Arcy, A, Oefner, C. Deposit date: 2003-09-09 Release date: 2004-03-16 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.67 Å) Cite: Crystal structures of staphylococcusaureus methionine aminopeptidase complexed with keto heterocycle and aminoketone inhibitors reveal the formation of a tetrahedral intermediate. J.Med.Chem., 47, 2004
3PHT	Crystal structure of H74A mutant of Helicobacter Pylori NikR Descriptor: NICKEL (II) ION, Putative nickel-responsive regulator Authors: Pozharski, E, Evans, S, Michel, S. Deposit date: 2010-11-04 Release date: 2011-11-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect. Proc.Natl.Acad.Sci.USA, 109, 2012
7KK1	Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84A mutant with pyruvate bound in the active site and L-lysine bound at the allosteric site Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ... Authors: Saran, S, Majdi Yazdi, M, Sanders, D.A.R. Deposit date: 2020-10-27 Release date: 2021-11-03 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.77 Å) Cite: A TIGHT DIMER INTERFACE N84 RESIDUE, PLAYS A CRITICAL ROLE IN THE TRANSMISSION OF THE ALLOSTERIC INHIBITION SIGNALS IN Cj.DHDPS To Be Published

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