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1M5V
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Transition State Stabilization by a Catalytic RNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, RNA HAIRPIN RIBOZYME, ...
Authors:Rupert, P.B, Massey, A.P, Sigurdsson, S.T, Ferre-D'Amare, A.R.
Deposit date:2002-07-09
Release date:2002-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Transition state stabilization by a catalytic RNA
Science, 298, 2002
1IQT
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Solution structure of the C-terminal RNA-binding domain of heterogeneous nuclear ribonucleoprotein D0 (AUF1)
Descriptor: heterogeneous nuclear ribonucleoprotein D0
Authors:Katahira, M, Miyanoiri, Y, Enokizono, Y, Matsuda, G, Nagata, T, Ishikawa, F, Uesugi, S.
Deposit date:2001-08-01
Release date:2002-08-07
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA.
J.Mol.Biol., 311, 2001
1M5K
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Crystal structure of a hairpin ribozyme in the catalytically-active conformation
Descriptor: CALCIUM ION, CHLORIDE ION, PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A), ...
Authors:Rupert, P.B, Ferre-D'Amare, A.R.
Deposit date:2002-07-09
Release date:2002-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Transition state stabilization by a catalytic RNA
Science, 298, 2002
1L3K
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UP1, THE TWO RNA-RECOGNITION MOTIF DOMAIN OF HNRNP A1
Descriptor: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
Authors:Vitali, J, Ding, J, Jiang, J, Zhang, Y, Krainer, A.R, Xu, R.-M.
Deposit date:2002-02-27
Release date:2002-04-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Correlated alternative side chain conformations in the RNA-recognition motif of heterogeneous nuclear ribonucleoprotein A1.
Nucleic Acids Res., 30, 2002
1JMT
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X-ray Structure of a Core U2AF65/U2AF35 Heterodimer
Descriptor: HEXANE-1,6-DIOL, SPLICING FACTOR U2AF 35 KDA SUBUNIT, SPLICING FACTOR U2AF 65 KDA SUBUNIT
Authors:Kielkopf, C.L, Rodionova, N.A, Green, M.R, Burley, S.K.
Deposit date:2001-07-19
Release date:2001-09-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A novel peptide recognition mode revealed by the X-ray structure of a core U2AF35/U2AF65 heterodimer.
Cell(Cambridge,Mass.), 106, 2001
1H6K
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nuclear Cap Binding Complex
Descriptor: 20 KDA NUCLEAR CAP BINDING PROTEIN, CBP80
Authors:Mazza, C, Ohno, M, Segref, A, Mattaj, I.W, Cusack, S.
Deposit date:2001-06-18
Release date:2001-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Human Nuclear CAP Binding Complex
Mol.Cell, 8, 2001
1G2E
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CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE TUMOR NECROSIS FACTOR ALPHA RNA
Descriptor: 5'-R(P*UP*AP*UP*UP*UP*AP*UP*UP*UP*A)-3', PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD
Authors:Wang, X, Hall, T.M.T.
Deposit date:2000-10-18
Release date:2001-02-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for recognition of AU-rich element RNA by the HuD protein.
Nat.Struct.Biol., 8, 2001
1FXL
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CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA
Descriptor: 5'-R(P*UP*UP*UP*UP*AP*UP*UP*UP*U)-3', PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD
Authors:Wang, X, Hall, T.M.T.
Deposit date:2000-09-26
Release date:2001-02-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for recognition of AU-rich element RNA by the HuD protein.
Nat.Struct.Biol., 8, 2001
1FJE
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SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA
Descriptor: NUCLEOLIN RBD12, SNRE RNA
Authors:Allain, F.H.T, Bouvet, P, Dieckmann, T, Feigon, J.
Deposit date:2000-08-08
Release date:2001-01-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin.
EMBO J., 19, 2000
1FJ7
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SOLUTION STRUCTURE OF NUCLEOLIN RBD1
Descriptor: NUCLEOLIN RBD1
Authors:Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J.
Deposit date:2000-08-07
Release date:2000-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.
J.Mol.Biol., 303, 2000
1FJC
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SOLUTION STRUCTURE OF NUCLEOLIN RBD2
Descriptor: NUCLEOLIN RBD2
Authors:Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J.
Deposit date:2000-08-07
Release date:2000-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.
J.Mol.Biol., 303, 2000
1QM9
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NMR, REPRESENTATIVE STRUCTURE
Descriptor: POLYPYRIMIDINE TRACT-BINDING PROTEIN
Authors:Conte, M.R, Grune, T, Curry, S, Matthews, S.
Deposit date:1999-09-22
Release date:2000-07-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of Tandem RNA Recognition Motifs from Polypyrimidine Tract Binding Protein Reveals Novel Features of the Rrm Fold
Embo J., 19, 2000
2MST
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MUSASHI1 RBD2, NMR
Descriptor: PROTEIN (MUSASHI1)
Authors:Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
Deposit date:1999-05-19
Release date:2000-05-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
2MSS
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MUSASHI1 RBD2, NMR
Descriptor: PROTEIN (MUSASHI1)
Authors:Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
Deposit date:1999-05-19
Release date:2000-05-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
1HD0
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HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0 (HNRNP D0 RBD1), NMR
Descriptor: PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0)
Authors:Nagata, T, Kurihara, Y, Matsuda, G, Saeki, J, Kohno, T, Yanagida, Y, Ishikawa, F, Uesugi, S, Katahira, M.
Deposit date:1999-05-18
Release date:2000-05-18
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and interactions with RNA of the N-terminal UUAG-specific RNA-binding domain of hnRNP D0.
J.Mol.Biol., 287, 1999
1HD1
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HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0 (HNRNP D0 RBD1), NMR
Descriptor: PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0)
Authors:Nagata, T, Kurihara, Y, Matsuda, G, Saeki, J, Kohno, T, Yanagida, Y, Ishikawa, F, Uesugi, S, Katahira, M.
Deposit date:1999-05-18
Release date:2000-05-18
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and interactions with RNA of the N-terminal UUAG-specific RNA-binding domain of hnRNP D0.
J.Mol.Biol., 287, 1999
1D9A
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SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN (RBD2) OF HU ANTIGEN C (HUC)
Descriptor: HU ANTIGEN C
Authors:Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-10-26
Release date:2000-04-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1D8Z
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SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN (RBD1) OF HU ANTIGEN C (HUC)
Descriptor: HU ANTIGEN C
Authors:Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-10-26
Release date:2000-04-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1DZ5
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The NMR structure of the 38KDa U1A protein-PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein
Descriptor: PIE, RNA (5'-R(*GP*AP*GP*AP*CP*AP*UP*UP*GP*CP*AP*CP*CP* CP*GP*GP*AP*GP*UP*CP*UP*C)-3'), U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
Authors:Varani, L, Gunderson, S.I, Mattaj, I.W, Kay, L.E, Neuhaus, D, Varani, G.
Deposit date:2000-02-16
Release date:2000-03-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The NMR Structure of the 38kDa U1A Protein-Pie RNA Complex Reveals the Basis of Cooperativity in Regulation of Polyadenylation by Human U1A Protein
Nat.Struct.Biol., 7, 2000
2UP1
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STRUCTURE OF UP1-TELOMERIC DNA COMPLEX
Descriptor: DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)
Authors:Ding, J, Hayashi, M.K, Krainer, A.R, Xu, R.-M.
Deposit date:1998-07-10
Release date:1999-11-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.
Genes Dev., 13, 1999
1CVJ
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X-RAY CRYSTAL STRUCTURE OF THE POLY(A)-BINDING PROTEIN IN COMPLEX WITH POLYADENYLATE RNA
Descriptor: 5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', ADENOSINE MONOPHOSPHATE, POLYADENYLATE BINDING PROTEIN 1
Authors:Deo, R.C, Bonanno, J.B, Sonenberg, N, Burley, S.K.
Deposit date:1999-08-23
Release date:1999-10-04
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Recognition of polyadenylate RNA by the poly(A)-binding protein.
Cell(Cambridge,Mass.), 98, 1999
2U2F
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SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN OF HU2AF65
Descriptor: PROTEIN (SPLICING FACTOR U2AF 65 KD SUBUNIT)
Authors:Ito, T, Muto, Y, Green, M.R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-05-26
Release date:1999-08-20
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structures of the first and second RNA-binding domains of human U2 small nuclear ribonucleoprotein particle auxiliary factor (U2AF(65)).
EMBO J., 18, 1999
1U2F
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SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN OF HU2AF65
Descriptor: PROTEIN (SPLICING FACTOR U2AF 65 KD SUBUNIT)
Authors:Ito, T, Muto, Y, Green, M.R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-05-26
Release date:1999-08-20
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structures of the first and second RNA-binding domains of human U2 small nuclear ribonucleoprotein particle auxiliary factor (U2AF(65)).
EMBO J., 18, 1999
1B7F
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SXL-LETHAL PROTEIN/RNA COMPLEX
Descriptor: PROTEIN (SXL-LETHAL PROTEIN), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Handa, N, Nureki, O, Kurimoto, K, Kim, I, Sakamoto, H, Shimura, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-01-23
Release date:1999-05-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein.
Nature, 398, 1999
3SXL
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SEX-LETHAL RNA RECOGNITION DOMAINS 1 AND 2 FROM DROSOPHILA MELANOGASTER
Descriptor: PROTEIN (SEX-LETHAL)
Authors:Crowder, S.M, Kanaar, R, Rio, D.C, Alber, T.C.
Deposit date:1999-04-04
Release date:1999-04-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Absence of interdomain contacts in the crystal structure of the RNA recognition motifs of Sex-lethal.
Proc.Natl.Acad.Sci.USA, 96, 1999

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