Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4E5F
DownloadVisualize
BU of 4e5f by Molmil
Crystal structure of avian influenza virus PAn bound to compound 1
Descriptor: 2-hydroxyisoquinoline-1,3(2H,4H)-dione, MANGANESE (II) ION, Polymerase protein PA, ...
Authors:DuBois, R.M, Slavish, P.J, Webb, T.R, White, S.W.
Deposit date:2012-03-14
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.392 Å)
Cite:Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease.
Plos Pathog., 8, 2012
4GVM
DownloadVisualize
BU of 4gvm by Molmil
HIV-1 Integrase Catalytic Core Domain A128T Mutant Complexed with Allosteric Inhibitor
Descriptor: (2S)-[6-bromo-4-(4-chlorophenyl)-2-methylquinolin-3-yl](tert-butoxy)ethanoic acid, ARSENIC, Gag-Pol polyprotein
Authors:Feng, L, Kvaratskhelia, M.
Deposit date:2012-08-30
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:The A128T Resistance Mutation Reveals Aberrant Protein Multimerization as the Primary Mechanism of Action of Allosteric HIV-1 Integrase Inhibitors.
J.Biol.Chem., 288, 2013
2I9W
DownloadVisualize
BU of 2i9w by Molmil
Crystal structure of a sec-c motif containing protein (psyc_2064) from psychrobacter arcticus at 1.75 A resolution
Descriptor: CHLORIDE ION, Hypothetical protein, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-09-06
Release date:2006-09-19
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of hypothetical protein (YP_265345.1) from Psychrobacter Arcticum 273-4 at 1.75 A resolution
To be published
4E6Y
DownloadVisualize
BU of 4e6y by Molmil
Type II citrate synthase from Vibrio vulnificus.
Descriptor: Citrate synthase, FORMIC ACID
Authors:Osipiuk, J, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-16
Release date:2012-03-28
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Type II citrate synthase from Vibrio vulnificus.
To be Published
4H4G
DownloadVisualize
BU of 4h4g by Molmil
Crystal Structure of (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase from Burkholderia thailandensis E264
Descriptor: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
Authors:Craig, T.K, Edwards, T.E, Staker, B, Stewart, L, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-09-17
Release date:2012-10-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
3D7R
DownloadVisualize
BU of 3d7r by Molmil
Crystal structure of a putative esterase from Staphylococcus aureus
Descriptor: BROMIDE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Lam, R, Battaile, K.P, Chan, T, Romanov, V, Lam, K, Soloveychik, M, Wu-Brown, J, Pai, E.F, Chirgadze, N.Y.
Deposit date:2008-05-21
Release date:2009-06-09
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of a putative esterase from Staphylococcus aureus
To be Published
4H6C
DownloadVisualize
BU of 4h6c by Molmil
Crystal Structure of the Allene Oxide Cyclase 1 from Physcomitrella patens
Descriptor: Allene oxide cyclase, HEXANE-1,6-DIOL, PHOSPHATE ION
Authors:Neumann, P, Ficner, R.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structures of Physcomitrella patens AOC1 and AOC2: Insights into the Enzyme Mechanism and Differences in Substrate Specificity.
Plant Physiol., 160, 2012
4GZY
DownloadVisualize
BU of 4gzy by Molmil
Crystal structures of bacterial RNA Polymerase paused elongation complexes
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Weixlbaumer, A, Leon, K, Landick, R, Darst, S.A.
Deposit date:2012-09-06
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5054 Å)
Cite:Structural basis of transcriptional pausing in bacteria.
Cell(Cambridge,Mass.), 152, 2013
3D5S
DownloadVisualize
BU of 3d5s by Molmil
Crystal Structure of Efb-C (R131A) / C3d Complex
Descriptor: Complement C3, Fibrinogen-binding protein
Authors:Geisbrecht, B.V.
Deposit date:2008-05-16
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Electrostatic contributions drive the interaction between Staphylococcus aureus protein Efb-C and its complement target C3d.
Protein Sci., 17, 2008
2IA7
DownloadVisualize
BU of 2ia7 by Molmil
Crystal structure of putative tail lysozyme (NP_952040.1) from GEOBACTER SULFURREDUCENS at 1.44 A resolution
Descriptor: 1,2-ETHANEDIOL, NITRATE ION, Tail lysozyme, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-09-07
Release date:2006-09-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystal structure of putative tail lysozyme (NP_952040.1) from GEOBACTER SULFURREDUCENS at 1.44 A resolution
To be published
4HAC
DownloadVisualize
BU of 4hac by Molmil
Crystal Structure of the Mevalonate Kinase from an Archaeon Methanosarcina mazei
Descriptor: MAGNESIUM ION, Mevalonate kinase
Authors:Zhuang, N, Lee, K.H.
Deposit date:2012-09-26
Release date:2012-12-12
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystallization and preliminary X-ray diffraction analysis of mevalonate kinase from Methanosarcina mazei.
Acta Crystallogr.,Sect.F, 68, 2012
3RFG
DownloadVisualize
BU of 3rfg by Molmil
Crystal structure of the yeast RACK1 dimer in space group P63
Descriptor: Guanine nucleotide-binding protein subunit beta-like protein
Authors:Yatime, L, Hein, K.L, Nilsson, J, Nissen, P.
Deposit date:2011-04-06
Release date:2011-07-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of the RACK1 dimer from Saccharomyces cerevisiae
J.Mol.Biol., 411, 2011
4H3E
DownloadVisualize
BU of 4h3e by Molmil
Crystal structure of a putative iron superoxide dismutase from Trypanosoma cruzi bound to iron
Descriptor: FE (II) ION, Superoxide dismutase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-09-13
Release date:2012-09-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Iron superoxide dismutases in eukaryotic pathogens: new insights from Apicomplexa and Trypanosoma structures.
Acta Crystallogr F Struct Biol Commun, 71, 2015
3D8S
DownloadVisualize
BU of 3d8s by Molmil
Thermus thermophilus Uroporphyrinogen III Synthase
Descriptor: GLYCEROL, Uroporphyrinogen-III synthase
Authors:Schubert, H.L.
Deposit date:2008-05-23
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanistic implications of a uroporphyrinogen III synthase-product complex.
Biochemistry, 47, 2008
3RG6
DownloadVisualize
BU of 3rg6 by Molmil
Crystal structure of a chaperone-bound assembly intermediate of form I Rubisco
Descriptor: RbcX protein, Ribulose bisphosphate carboxylase large chain
Authors:Bracher, A, Starling-Windhof, A, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2011-04-07
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a chaperone-bound assembly intermediate of form I Rubisco.
Nat.Struct.Mol.Biol., 18, 2011
3DA7
DownloadVisualize
BU of 3da7 by Molmil
A conformationally strained, circular permutant of barnase
Descriptor: Barnase circular permutant, Barstar
Authors:Mitrousis, G, Butler, J, Loh, S.N, Cingolani, G.
Deposit date:2008-05-28
Release date:2009-04-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and thermodynamic analysis of a conformationally strained circular permutant of barnase.
Biochemistry, 48, 2009
4H4M
DownloadVisualize
BU of 4h4m by Molmil
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-3-(3-chloro-5-(4-chloro-2-(2-(2,4-dioxo-3,4- dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)phenyl)acrylonitrile (JLJ494), a Non-nucleoside Inhibitor
Descriptor: (2E)-3-(3-chloro-5-{4-chloro-2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}phenyl)prop-2-enenitrile, 1,2-ETHANEDIOL, Reverse transcriptase/ribonuclease H, ...
Authors:Frey, K.M, Anderson, K.S.
Deposit date:2012-09-17
Release date:2012-12-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structures of HIV-1 Reverse Transcriptase with Picomolar Inhibitors Reveal Key Interactions for Drug Design.
J.Am.Chem.Soc., 134, 2012
2NRR
DownloadVisualize
BU of 2nrr by Molmil
Crystal structure of the C-terminal RNAseH endonuclase domain of UvrC
Descriptor: UvrABC system protein C
Authors:Karakas, E, Truglio, J.J, Kisker, C.
Deposit date:2006-11-02
Release date:2007-02-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad.
Embo J., 26, 2007
3R0O
DownloadVisualize
BU of 3r0o by Molmil
Crystal structure of carnitinyl-CoA hydratase from Mycobacterium avium
Descriptor: 1,2-ETHANEDIOL, Carnitinyl-CoA dehydratase, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-03-08
Release date:2011-03-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
3RIC
DownloadVisualize
BU of 3ric by Molmil
Crystal Structure of D48V||A47D mutant of Human Glycolipid Transfer Protein complexed with 3-O-sulfo-galactosylceramide containing nervonoyl acyl chain (24:1)
Descriptor: (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE, Glycolipid transfer protein
Authors:Samygina, V, Ochoa-Lizarralde, B, Patel, D.J, Brown, R.E, Malinina, L.
Deposit date:2011-04-13
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enhanced selectivity for sulfatide by engineered human glycolipid transfer protein.
Structure, 19, 2011
4H96
DownloadVisualize
BU of 4h96 by Molmil
Candida albicans dihydrofolate reductase complexed with NADPH and 5-{3-[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-5-methoxyphenyl]prop-1-yn-1-yl}-6-ethylpyrimidine-2,4-diamine (UCP1018)
Descriptor: 5-{3-[3-(1,3-benzodioxol-5-yl)-5-methoxyphenyl]prop-1-yn-1-yl}-6-ethylpyrimidine-2,4-diamine, Dihydrofolate Reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Paulsen, J.L, Anderson, A.C.
Deposit date:2012-09-24
Release date:2013-03-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the active sites of dihydrofolate reductase from two species of Candida uncovers ligand-induced conformational changes shared among species.
Bioorg.Med.Chem.Lett., 23, 2013
4GNO
DownloadVisualize
BU of 4gno by Molmil
Structure of rat cytosolic PEPCK Ld_3g in complex with Beta-Sulfopyruvate and GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PENTAETHYLENE GLYCOL, ...
Authors:Johnson, T.A, Holyoak, T.
Deposit date:2012-08-17
Release date:2013-07-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function.
Biochemistry, 51, 2012
3DAH
DownloadVisualize
BU of 3dah by Molmil
2.3 A crystal structure of ribose-phosphate pyrophosphokinase from Burkholderia pseudomallei
Descriptor: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Ribose-phosphate pyrophosphokinase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-05-29
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
3DDZ
DownloadVisualize
BU of 3ddz by Molmil
Proteinase K by LB nanotemplate method after the first step of high X-Ray dose on ESRF ID23-1 beamline
Descriptor: CALCIUM ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-06-07
Release date:2009-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Radiation stability of proteinase K crystals grown by LB nanotemplate method
J.Struct.Biol., 168, 2009
4DAI
DownloadVisualize
BU of 4dai by Molmil
Crystal structure of B. anthracis DHPS with compound 23
Descriptor: (7-amino-4,5-dioxo-1,4,5,6-tetrahydropyrimido[4,5-c]pyridazin-3-yl)acetic acid, Dihydropteroate Synthase, SULFATE ION
Authors:Hammoudeh, D, Lee, R.E, White, S.W.
Deposit date:2012-01-12
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design of Novel Pyrimido[4,5-c]pyridazine Derivatives as Dihydropteroate Synthase Inhibitors with Increased Affinity.
Chemmedchem, 7, 2012

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon