Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CFS
DownloadVisualize
BU of 1cfs by Molmil
ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH AN EPITOPE-UNRELATED PEPTIDE
Descriptor: PROTEIN (ANTIGEN BOUND PEPTIDE), PROTEIN (IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN)), PROTEIN (IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN))
Authors:Keitel, T, Kramer, A, Wessner, H, Scholz, C, Schneider-Mergener, J, Hoehne, W.
Deposit date:1999-03-19
Release date:1999-03-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity.
Cell(Cambridge,Mass.), 91, 1997
5EJS
DownloadVisualize
BU of 5ejs by Molmil
Structure of Dictyostelium Discoideum Myosin VII MyTH4-FERM MF2 domain, mutant 1
Descriptor: Myosin-I heavy chain
Authors:Planelles-Herrero, V.J, Sirkia, H, Sourigues, Y, Titus, M.A, Houdusse, A.
Deposit date:2015-11-02
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Myosin MyTH4-FERM structures highlight important principles of convergent evolution.
Proc.Natl.Acad.Sci.USA, 113, 2016
1GEN
DownloadVisualize
BU of 1gen by Molmil
C-TERMINAL DOMAIN OF GELATINASE A
Descriptor: CALCIUM ION, CHLORIDE ION, GELATINASE A, ...
Authors:Libson, A.M, Gittis, A.G, Collier, I.E, Marmer, B.L, Goldberg, G.G, Lattman, E.E.
Deposit date:1995-07-19
Release date:1996-08-17
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the haemopexin-like C-terminal domain of gelatinase A.
Nat.Struct.Biol., 2, 1995
1CQ6
DownloadVisualize
BU of 1cq6 by Molmil
ASPARTATE AMINOTRANSFERASE COMPLEX WITH C4-PYRIDOXAL-5P-PHOSPHATE
Descriptor: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO- BUTYRIC ACID, ASPARTATE AMINOTRANSFERASE
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-06
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
1JQV
DownloadVisualize
BU of 1jqv by Molmil
The K213E mutant of Lactococcus lactis Dihydroorotate dehydrogenase A
Descriptor: ACETIC ACID, Dihydroorotate dehydrogenase A, FLAVIN MONONUCLEOTIDE, ...
Authors:Norager, S, Arent, S, Bjornberg, O, Ottosen, M, Lo Leggio, L, Jensen, K.F, Larsen, S.
Deposit date:2001-08-09
Release date:2003-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Lactococcus lactis dihydroorotate dehydrogenase A mutants reveal important facets of the enzymatic function
J.Biol.Chem., 278, 2003
1JRB
DownloadVisualize
BU of 1jrb by Molmil
The P56A mutant of Lactococcus lactis dihydroorotate dehydrogenase A
Descriptor: FLAVIN MONONUCLEOTIDE, OROTIC ACID, dihydroorotate dehydrogenase A
Authors:Norager, S, Arent, S, Bjornberg, O, Ottosen, M, Lo Leggio, L, Jensen, K.F, Larsen, S.
Deposit date:2001-08-13
Release date:2003-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Lactococcus lactis dihydroorotate dehydrogenase A mutants reveal important facets of the enzymatic function
J.Biol.Chem., 278, 2003
1JS0
DownloadVisualize
BU of 1js0 by Molmil
Crystal Structure of 3D Domain-swapped RNase A Minor Trimer
Descriptor: RIBONUCLEASE A, SULFATE ION
Authors:Liu, Y, Gotte, G, Libonati, M, Eisenberg, D.
Deposit date:2001-08-15
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of the two 3D domain-swapped RNase A trimers.
Protein Sci., 11, 2002
8K1K
DownloadVisualize
BU of 8k1k by Molmil
KtrA bound with ATP and sodium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, SODIUM ION
Authors:Chiang, W.T, Chang, Y.K, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1T
DownloadVisualize
BU of 8k1t by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
1PXE
DownloadVisualize
BU of 1pxe by Molmil
Solution Structure of a CCHHC Domain of Neural Zinc Finger Factor-1
Descriptor: ZINC ION, neural zinc finger transcription factor 1
Authors:Berkovits-Cymet, H.J, Amann, B.T, Berg, J.M.
Deposit date:2003-07-03
Release date:2004-02-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a CCHHC Domain of Neural Zinc Finger Factor-1 and Its Implications for DNA Binding.
Biochemistry, 43, 2004
7Z2A
DownloadVisualize
BU of 7z2a by Molmil
P. berghei kinesin-8B motor domain in no nucleotide state bound to tubulin dimer
Descriptor: Detyrosinated tubulin alpha-1B chain, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-8, ...
Authors:Liu, T, Shilliday, F, Cook, A.D, Moores, C.A.
Deposit date:2022-02-26
Release date:2022-10-19
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Mechanochemical tuning of a kinesin motor essential for malaria parasite transmission.
Nat Commun, 13, 2022
5EJR
DownloadVisualize
BU of 5ejr by Molmil
Structure of Dictyostelium Discoideum Myosin VII MyTH4-FERM MF2 domain
Descriptor: 1,2-ETHANEDIOL, Myosin-I heavy chain
Authors:Planelles-Herrero, V.J, Sirkia, H, Sourigues, Y, Clause, J, Titus, M.A, Houdusse, A.
Deposit date:2015-11-02
Release date:2016-07-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Myosin MyTH4-FERM structures highlight important principles of convergent evolution.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EJY
DownloadVisualize
BU of 5ejy by Molmil
Structure of Dictyostelium Discoideum Myosin VII MyTH4-FERM MF1 domain
Descriptor: CHLORIDE ION, Myosin-I heavy chain, POLYETHYLENE GLYCOL (N=34)
Authors:Sirigu, S, Titus, M.A, Houdusse, A.
Deposit date:2015-11-02
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Myosin MyTH4-FERM structures highlight important principles of convergent evolution.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EOD
DownloadVisualize
BU of 5eod by Molmil
Human Plasma Coagulation FXI with peptide LP2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor XI, LP2
Authors:Wong, S.S, Ostergaard, S, Hall, G, Li, C, Williams, P.M, Stennicke, H, Emsley, J.
Deposit date:2015-11-10
Release date:2016-04-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A novel DFP tripeptide motif interacts with the coagulation factor XI apple 2 domain.
Blood, 127, 2016
1HDD
DownloadVisualize
BU of 1hdd by Molmil
CRYSTAL STRUCTURE OF AN ENGRAILED HOMEODOMAIN-DNA COMPLEX AT 2.8 ANGSTROMS RESOLUTION: A FRAMEWORK FOR UNDERSTANDING HOMEODOMAIN-DNA INTERACTIONS
Descriptor: DNA (5'-D(*AP*TP*TP*AP*GP*GP*TP*AP*AP*TP*TP*AP*CP*AP*TP*GP*G P*CP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*TP*AP*C P*CP*TP*AP*A)-3'), PROTEIN (ENGRAILED HOMEODOMAIN)
Authors:Kissinger, C.R, Liu, B, Martin-Blanco, E, Kornberg, T.B, Pabo, C.O.
Deposit date:1991-09-16
Release date:1992-01-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of an engrailed homeodomain-DNA complex at 2.8 A resolution: a framework for understanding homeodomain-DNA interactions.
Cell(Cambridge,Mass.), 63, 1990
5IBW
DownloadVisualize
BU of 5ibw by Molmil
Complex of MlcC bound to the tandem IQ motif of MyoC
Descriptor: Calcium-binding EF-hand domain-containing protein, Myosin IC heavy chain, SODIUM ION
Authors:Langelaan, D.N, Smith, S.P.
Deposit date:2016-02-22
Release date:2016-08-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the Single-lobe Myosin Light Chain C in Complex with the Light Chain-binding Domains of Myosin-1C Provides Insights into Divergent IQ Motif Recognition.
J.Biol.Chem., 291, 2016
8K16
DownloadVisualize
BU of 8k16 by Molmil
KtrA bound with ATP and thallium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, THALLIUM (I) ION
Authors:Chiang, W.T, Chang, Y.K, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-10
Release date:2024-04-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
2BLM
DownloadVisualize
BU of 2blm by Molmil
BETA-LACTAMASE OF BACILLUS LICHENIFORMIS 749(SLASH)C AT 2 ANGSTROMS RESOLUTION
Descriptor: BETA-LACTAMASE
Authors:Moews, P.C, Knox, J.R, Dideberg, O.
Deposit date:1990-02-02
Release date:1990-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Beta-lactamase of Bacillus licheniformis 749/C at 2 A resolution.
Proteins, 7, 1990
8K1U
DownloadVisualize
BU of 8k1u by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8K1S
DownloadVisualize
BU of 8k1s by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural basis and synergism of ATP and Na + activation in bacterial K + uptake system KtrAB.
Nat Commun, 15, 2024
8OK1
DownloadVisualize
BU of 8ok1 by Molmil
WD repeat containing protein 5 (WDR5)- N225A mutant
Descriptor: Glutathione S-transferase class-mu 26 kDa isozyme,WD repeat-containing protein 5
Authors:Wolf, E, Boergel, A.
Deposit date:2023-03-26
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:A structural competition involving WDR5 times circadian oscillations
To Be Published
8OKF
DownloadVisualize
BU of 8okf by Molmil
WD repeat containing protein 5 (WDR5)- PER2 peptide
Descriptor: CHLORIDE ION, Glutathione S-transferase class-mu 26 kDa isozyme,WD repeat domain 5, PENTAETHYLENE GLYCOL, ...
Authors:Wolf, E, Boergel, A.
Deposit date:2023-03-28
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A structural competition involving WDR5 times circadian oscillations
To Be Published
5EKY
DownloadVisualize
BU of 5eky by Molmil
Crystal structure of deoxyribose-phosphate aldolase from Escherichia coli (K58E-Y96W mutant)
Descriptor: 1,3-BUTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Deoxyribose-phosphate aldolase
Authors:Classen, T, Dick, M, Pietruszka, J, Weiergraeber, O.H.
Deposit date:2015-11-04
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Mechanism-based inhibition of an aldolase at high concentrations of its natural substrate acetaldehyde: structural insights and protective strategies.
Chem Sci, 7, 2016
8AGG
DownloadVisualize
BU of 8agg by Molmil
Structure of the Legionella phosphocholine hydrolase Lem3
Descriptor: MAGNESIUM ION, Phosphocholine hydrolase Lem3
Authors:Kaspers, M.S, Itzen, A, Pogenberg, V.
Deposit date:2022-07-20
Release date:2023-04-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Dephosphocholination by Legionella effector Lem3 functions through remodelling of the switch II region of Rab1b.
Nat Commun, 14, 2023
2HAL
DownloadVisualize
BU of 2hal by Molmil
An episulfide cation (thiiranium ring) trapped in the active site of HAV 3C proteinase inactivated by peptide-based ketone inhibitors
Descriptor: Hepatitis A Protease 3C, N-ACETYL-LEUCYL-PHENYLALANYL-PHENYLALANYL-GLUTAMATE-FLUOROMETHYLKETONE INHIBITOR, N-[(BENZYLOXY)CARBONYL]-L-ALANINE
Authors:Yin, J, Cherney, M.M, Bergmann, E.M, James, M.N.
Deposit date:2006-06-13
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:An Episulfide Cation (Thiiranium Ring) Trapped in the Active Site of HAV 3C Proteinase Inactivated by Peptide-based Ketone Inhibitors.
J.Mol.Biol., 361, 2006

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon