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7PF6
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BU of 7pf6 by Molmil
Nucleosome 1 of the 4x187 nucleosome array containing H1
Descriptor: DNA (167-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PF2
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BU of 7pf2 by Molmil
Nucleosome stack of the 4x187 nucleosome array containing H1
Descriptor: DNA (541-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFD
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BU of 7pfd by Molmil
Nucleosome 1 of the 4x197 nucleosome array containing H1
Descriptor: DNA (172-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PF0
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BU of 7pf0 by Molmil
Trinucleosome of the 4x177 nucleosome array containing H1
Descriptor: DNA (563-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
4FCX
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BU of 4fcx by Molmil
S.pombe Mre11 apoenzym
Descriptor: DNA repair protein rad32, MANGANESE (II) ION
Authors:Schiller, C.B, Lammens, K, Hopfner, K.P.
Deposit date:2012-05-25
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Mre11-Nbs1 complex yields insights into ataxia-telangiectasia-like disease mutations and DNA damage signaling.
Nat.Struct.Mol.Biol., 19, 2012
2VXC
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BU of 2vxc by Molmil
Structure of the Crb2-BRCT2 domain complex with phosphopeptide.
Descriptor: DNA REPAIR PROTEIN RHP9, H2A1 PEPTIDE, PRASEODYMIUM ION
Authors:Kilkenny, M.L, Roe, S.M, Pearl, L.H.
Deposit date:2008-07-03
Release date:2008-08-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and Functional Analysis of the Crb2-Brct2 Domain Reveals Distinct Roles in Checkpoint Signaling and DNA Damage Repair.
Genes Dev., 22, 2008
6RNY
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BU of 6rny by Molmil
PFV intasome - nucleosome strand transfer complex
Descriptor: DNA (108-MER), DNA (128-MER), DNA (33-MER), ...
Authors:Pye, V.E, Renault, L, Maskell, D.P, Cherepanov, P, Costa, A.
Deposit date:2019-05-09
Release date:2019-09-25
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Retroviral integration into nucleosomes through DNA looping and sliding along the histone octamer.
Nat Commun, 10, 2019
1CW9
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BU of 1cw9 by Molmil
DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVE
Descriptor: 5'-D(*CP*CP*AP*GP*(G47)P*CP*CP*TP*GP*G)-3', CALCIUM ION
Authors:van Aalten, D.M.F, Erlanson, D.A, Verdine, G.L, Joshua-Tor, L.
Deposit date:1999-08-26
Release date:1999-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A structural snapshot of base-pair opening in DNA.
Proc.Natl.Acad.Sci.USA, 96, 1999
2VXB
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BU of 2vxb by Molmil
Structure of the Crb2-BRCT2 domain
Descriptor: DNA REPAIR PROTEIN RHP9, PRASEODYMIUM ION
Authors:Kilkenny, M.L, Roe, S.M, Pearl, L.H.
Deposit date:2008-07-03
Release date:2008-08-12
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Functional Analysis of the Crb2-Brct2 Domain Reveals Distinct Roles in Checkpoint Signaling and DNA Damage Repair.
Genes Dev., 22, 2008
5UJY
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BU of 5ujy by Molmil
The structure of Mycobacterium tuberculosis topoisomerase I from the 2nd crystal form
Descriptor: DNA topoisomerase 1
Authors:Cao, N, Tan, K, Tse-Dinh, Y.C.
Deposit date:2017-01-19
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.
Nucleic Acids Res., 46, 2018
5WJR
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BU of 5wjr by Molmil
High resolution native hexamer DNA and RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*TP*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Huang, Z.
Deposit date:2017-07-24
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5U6Z
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BU of 5u6z by Molmil
Crystal Structure of Xenopus laevis Apex2 C-terminal Znf-GRF Domain
Descriptor: DNA-(apurinic or apyrimidinic site) lyase, SULFATE ION, ZINC ION
Authors:Wallace, B.D, Williams, R.S.
Deposit date:2016-12-09
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:APE2 Zf-GRF facilitates 3'-5' resection of DNA damage following oxidative stress.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3PT9
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BU of 3pt9 by Molmil
Crystal structure of mouse DNMT1(731-1602) in the free state
Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Song, J, Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
7PFX
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BU of 7pfx by Molmil
Nucleosome 3 of the 4x207 nucleosome array containing H1
Descriptor: DNA (177-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-12
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFC
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BU of 7pfc by Molmil
Nucleosome stack of the 4x197 nucleosome array containing H1
Descriptor: DNA (788-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PEY
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BU of 7pey by Molmil
Nucleosome 3 of the 4x177 nucleosome array containing H1
Descriptor: DNA (202-MER), DNA (203-MER), Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PEX
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BU of 7pex by Molmil
Nucleosome 2 of the 4x177 nucleosome array containing H1
Descriptor: DNA (177-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PEZ
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BU of 7pez by Molmil
Nucleosome 4 of the 4x177 nucleosome array containing H1
Descriptor: DNA (182-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PET
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BU of 7pet by Molmil
The 4x177 nucleosome array containing H1
Descriptor: DNA (702-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PF3
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BU of 7pf3 by Molmil
Nucleosome 4 of the 4x187 nucleosome array containing H1
Descriptor: DNA (167-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFU
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BU of 7pfu by Molmil
Nucleosome stack of the 4x207 nucleosome array containing H1
Descriptor: DNA (591-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-12
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFA
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BU of 7pfa by Molmil
Trinucleosome of the 4x197 nucleosome array containing H1
Descriptor: DNA (561-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PEU
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BU of 7peu by Molmil
Trinucleosome of the 4x177 nucleosome array containing H1
Descriptor: DNA (522-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFE
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BU of 7pfe by Molmil
Nucleosome 2 of the 4x197 nucleosome array containing H1
Descriptor: DNA (177-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFT
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BU of 7pft by Molmil
Trinucleosome of the 4x207 nucleosome array containing H1
Descriptor: DNA (591-MER), Histone H1.4, Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-12
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022

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PDB entries from 2024-10-02

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