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1YIU
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Itch E3 ubiquitin ligase WW3 domain
Descriptor: Itchy E3 ubiquitin protein ligase
Authors:Shaw, A.Z, Martin-Malpartida, P, Morales, B, Yraola, F, Royo, M, Macias, M.J.
Deposit date:2005-01-13
Release date:2005-08-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Phosphorylation of either Ser16 or Thr30 does not disrupt the structure of the Itch E3 ubiquitin ligase third WW domain
Proteins, 60, 2005
1YIV
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Structure of myelin P2 protein from Equine spinal cord
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, LAURYL DIMETHYLAMINE-N-OXIDE, Myelin P2 protein
Authors:Hunter, D.J.B, MacMaster, R, Rozak, A.W, Riboldi-Tunnicliffe, A, Grifiths, I.R, Freer, A.A.
Deposit date:2005-01-13
Release date:2005-07-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of myelin P2 protein from equine spinal cord.
Acta Crystallogr.,Sect.D, 61, 2005
1YIW
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X-ray Crystal Structure of a Chemically Synthesized Ubiquitin
Descriptor: CADMIUM ION, CHLORIDE ION, Ubiquitin
Authors:Bang, D, Makhatadze, G.I, Tereshko, V, Kossiakoff, A.A, Kent, S.B.
Deposit date:2005-01-13
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin
Angew.Chem.Int.Ed.Engl., 44, 2005
1YIX
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Crystal structure of YCFH, TATD homolog from Escherichia coli K12, at 1.9 A resolution
Descriptor: ZINC ION, deoxyribonuclease ycfH
Authors:Malashkevich, V.N, Xiang, D.F, Raushel, F.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-01-13
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ycfH, tatD homolog from Escherichia coli
To be Published
1YIY
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Aedes aegypti kynurenine aminotransferase
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, BROMIDE ION, kynurenine aminotransferase; glutamine transaminase K
Authors:Han, Q, Gao, Y.G, Robinson, H, Ding, H, Wilson, S, Li, J.
Deposit date:2005-01-13
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Aedes aegypti kynurenine aminotransferase.
FEBS J., 272, 2005
1YIZ
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Aedes aegypti kynurenine aminotrasferase
Descriptor: BROMIDE ION, kynurenine aminotransferase; glutamine transaminase
Authors:Han, Q, Gao, Y.G, Robinson, H, Ding, H, Wilson, S, Li, J.
Deposit date:2005-01-13
Release date:2005-05-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of Aedes aegypti kynurenine aminotransferase.
FEBS J., 272, 2005
1YJ0
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Crystal Structures of Chicken Annexin V in Complex with Zn2+
Descriptor: Annexin A5, SULFATE ION, ZINC ION
Authors:Ortlund, E.A, Chai, G, Genge, B, Wu, L.N.Y, Wuthier, R.E, Lebioda, L.
Deposit date:2005-01-11
Release date:2005-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structures of Chicken Annexin A5 in Complex with Functional Modifiers Ca2+ and Zn2+ Reveal Zn2+ Induced Formation of Non-Planar Assemblies
Annexins, 1, 2005
1YJ1
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X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin
Descriptor: CADMIUM ION, CHLORIDE ION, Ubiquitin
Authors:Bang, D, Makhatadze, G.I, Tereshko, V, Kossiakoff, A.A, Kent, S.B.
Deposit date:2005-01-13
Release date:2005-06-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin
Angew.Chem.Int.Ed.Engl., 44, 2005
1YJ2
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Cyclized, non-dehydrated post-translational product for S65A Y66S H148G GFP variant
Descriptor: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-13
Release date:2005-02-15
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
1YJ3
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Crystal structure analysis of product bound methionine aminopeptidase Type 1c from Mycobacterium Tuberculosis
Descriptor: BETA-MERCAPTOETHANOL, COBALT (II) ION, METHIONINE, ...
Authors:Addlagatta, A, Quillin, M.L, Omotoso, O, Liu, J.O, Matthews, B.W.
Deposit date:2005-01-13
Release date:2005-07-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of an SH3-binding motif in a new class of methionine aminopeptidases from Mycobacterium tuberculosis suggests a mode of interaction with the ribosome.
Biochemistry, 44, 2005
1YJ4
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Y305F Trichodiene Synthase
Descriptor: 1,2-ETHANEDIOL, Trichodiene synthase
Authors:Vedula, L.S, Rynkiewicz, M.J, Pyun, H.J, Coates, R.M, Cane, D.E, Christianson, D.W.
Deposit date:2005-01-13
Release date:2005-03-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Recognition of the Substrate Diphosphate Group Governs Product Diversity in Trichodiene Synthase Mutants.
Biochemistry, 44, 2005
1YJ5
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Molecular architecture of mammalian polynucleotide kinase, a DNA repair enzyme
Descriptor: 5' polynucleotide kinase-3' phosphatase FHA domain, 5' polynucleotide kinase-3' phosphatase catalytic domain, SULFATE ION
Authors:Bernstein, N.K, Williams, R.S, Rakovszky, M.L, Cui, D, Green, R, Karimi-Busheri, F, Mani, R.S, Galicia, S, Koch, C.A, Cass, C.E, Durocher, D, Weinfeld, M, Glover, J.N.M.
Deposit date:2005-01-13
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The molecular architecture of the mammalian DNA repair enzyme, polynucleotide kinase.
Mol.Cell, 17, 2005
1YJ6
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crystal structure of human glutathione S-transferase M1A-1A complexed with glutathionyl-zinc-trihydroxide
Descriptor: GLUTATHIONE, Glutathione S-transferase Mu 1, ZINC ION
Authors:Patskovsky, Y.V, Patskovska, L.N, Listowsky, I, Almo, S.C.
Deposit date:2005-01-13
Release date:2005-02-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human Glutathione S-Transferase M1A-1A Catalyzes Formation of Gsh-Metal Complexes
To be Published
1YJ7
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Crystal structure of enteropathogenic E.coli (EPEC) type III secretion system protein EscJ
Descriptor: GLYCEROL, PHOSPHATE ION, escJ
Authors:Yip, C.K, Kimbrough, T.G, Felise, H.B, Vuckovic, M, Thomas, N.A, Pfuetzner, R.A, Frey, E.A, Finlay, B.B, Miller, S.I, Strynadka, N.C.J.
Deposit date:2005-01-13
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of the molecular platform for type III secretion system assembly.
Nature, 435, 2005
1YJ8
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Initial structural analysis of Plasmodium falciparum Glycerol-3-phosphate dehydrogenase
Descriptor: glycerol-3-phosphate dehydrogenase
Authors:Robien, M.A, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-01-13
Release date:2005-02-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Initial structural analysis of Plasmodium falciparum Glycerol-3-phosphate dehydrogenase
To be Published
1YJ9
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Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22
Descriptor: 23S Ribosomal RNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L11P, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-13
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.
Cell(Cambridge,Mass.), 121, 2005
1YJA
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SUBTILISIN BPN' 8397+1 (E.C. 3.4.21.14) (MUTANT WITH MET 50 REPLACED BY PHE, ASN 76 REPLACED BY ASP, GLY 169 REPLACED BY ALA, GLN 206 REPLACED BY CYS, ASN 218 REPLACED BY SER AND LYS 256 REPLACED BY TYR) (M50F, N76D, G169A, Q206C, N218S, AND K256Y) IN 20% DIMETHYLFORMAMIDE
Descriptor: CALCIUM ION, SUBTILISIN 8397+1
Authors:Kidd, R.D, Farber, G.K.
Deposit date:1996-01-16
Release date:1996-07-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Breaking the low barrier hydrogen bond in a serine protease.
Protein Sci., 8, 1999
1YJB
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BU of 1yjb by Molmil
SUBTILISIN BPN' 8397+1 (E.C. 3.4.21.14) (MUTANT WITH MET 50 REPLACED BY PHE, ASN 76 REPLACED BY ASP, GLY 169 REPLACED BY ALA, GLN 206 REPLACED BY CYS, ASN 218 REPLACED BY SER AND LYS 256 REPLACED BY TYR) (M50F, N76D, G169A, Q206C, N218S, AND K256Y) IN 35% DIMETHYLFORMAMIDE
Descriptor: CALCIUM ION, SUBTILISIN 8397+1
Authors:Kidd, R.D, Farber, G.K.
Deposit date:1996-01-16
Release date:1996-07-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Breaking the low barrier hydrogen bond in a serine protease.
Protein Sci., 8, 1999
1YJC
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BU of 1yjc by Molmil
SUBTILISIN BPN' 8397+1 (E.C. 3.4.21.14) (MUTANT WITH MET 50 REPLACED BY PHE, ASN 76 REPLACED BY ASP, GLY 169 REPLACED BY ALA, GLN 206 REPLACED BY CYS, ASN 218 REPLACED BY SER AND LYS 256 REPLACED BY TYR) (M50F, N76D, G169A, Q206C, N218S, AND K256Y) IN 50% DIMETHYLFORMAMIDE
Descriptor: CALCIUM ION, SUBTILISIN 8397+1
Authors:Kidd, R.D, Farber, G.K.
Deposit date:1996-01-16
Release date:1996-07-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Breaking the low barrier hydrogen bond in a serine protease.
Protein Sci., 8, 1999
1YJD
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Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab fragment of 5.11A1 antibody heavy chain, Fab fragment of 5.11A1 antibody light chain, ...
Authors:Evans, E.J, Esnouf, R.M, Manso-Sancho, R, Gilbert, R.J.C, James, J.R, Sorensen, P, Stuart, D.I, Davis, S.J.
Deposit date:2005-01-14
Release date:2005-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a soluble CD28-Fab complex
Nat.Immunol., 6, 2005
1YJE
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Crystal structure of the rNGFI-B ligand-binding domain
Descriptor: Orphan nuclear receptor NR4A1
Authors:Flaig, R, Greschik, H, Peluso-Iltis, C, Moras, D, Structural Proteomics in Europe (SPINE)
Deposit date:2005-01-14
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the cell-specific activities of the NGFI-B and the Nurr1 ligand-binding domain.
J.Biol.Chem., 280, 2005
1YJF
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Cyclized post-translational product for S65A Y66S (GFPhal) green fluorescent protein variant
Descriptor: Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-14
Release date:2005-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
1YJG
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Variable Small Protein 1 of Borrelia turicatae (VspA or Vsp1)
Descriptor: Surface protein VspA
Authors:Zueckert, W.R, Yung, B.H, Barbour, A.G, Lawson, C.L.
Deposit date:2005-01-14
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of neurotropism-associated variable surface protein 1 (Vsp1) of Borrelia turicatae.
J.Bacteriol., 188, 2006
1YJH
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Crystal Structure of Cimex Nitrophorin Ferrous NO Complex
Descriptor: NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE, salivary nitrophorin
Authors:Weichsel, A, Badgandi, H, Montfort, W.R.
Deposit date:2005-01-14
Release date:2005-12-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Cimex Nitrophorin NO Complex
To be Published
1YJI
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RDC-refined Solution NMR structure of reduced putidaredoxin
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putidaredoxin
Authors:Jain, N.U, Tjioe, E, Savidor, A, Boulie, J.
Deposit date:2005-01-14
Release date:2005-06-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Redox-dependent structural differences in putidaredoxin derived from homologous structure refinement via residual dipolar couplings.
Biochemistry, 44, 2005

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