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3RDM
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BU of 3rdm by Molmil
Crystal structure of R7-2 streptavidin complexed with biotin/PEG
Descriptor: BIOTIN, PENTAETHYLENE GLYCOL, Streptavidin
Authors:Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
Deposit date:2011-04-01
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
3RDU
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BU of 3rdu by Molmil
Crystal structure of R7-2 streptavidin complexed with PEG
Descriptor: GLYCEROL, PENTAETHYLENE GLYCOL, Streptavidin
Authors:Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
Deposit date:2011-04-01
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
6T1E
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BU of 6t1e by Molmil
Streptavidin variants harbouring an artificial organocatalyst based cofactor
Descriptor: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide, ACETATE ION, CHLORIDE ION, ...
Authors:Lechner, H, Hocker, B.
Deposit date:2019-10-04
Release date:2020-10-14
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Chembiochem, 22, 2021
6UD6
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BU of 6ud6 by Molmil
Spectroscopic and structural characterization of a genetically encoded direct sensor for protein-ligand interactions
Descriptor: CHLORIDE ION, GLYCEROL, Streptavidin
Authors:Mills, J.H, Gleason, P.R, Simmons, C.R, Henderson, J.N, Kartchner, B.K.
Deposit date:2019-09-18
Release date:2020-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Structural Origins of Altered Spectroscopic Properties upon Ligand Binding in Proteins Containing a Fluorescent Noncanonical Amino Acid.
Biochemistry, 60, 2021
6UDC
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BU of 6udc by Molmil
Spectroscopic and structural characterization of a genetically encoded direct sensor for protein-ligand interactions
Descriptor: BIOTIN, Streptavidin
Authors:Mills, J.H, Gleason, P.R, Simmons, C.R, Henderson, J.N, Kartchner, B.K.
Deposit date:2019-09-19
Release date:2020-09-23
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Origins of Altered Spectroscopic Properties upon Ligand Binding in Proteins Containing a Fluorescent Noncanonical Amino Acid.
Biochemistry, 60, 2021
6TIP
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BU of 6tip by Molmil
Engineered streptavidin variant (YNAFM) in complex with the Strep-tag II peptide
Descriptor: AMINO GROUP, Strep-tag II peptide, Streptavidin
Authors:Skerra, A, Eichinger, A.
Deposit date:2019-11-22
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Role of Changing Loop Conformations in Streptavidin Versions Engineered for High-affinity Binding of the Strep-tag II Peptide.
J.Mol.Biol., 433, 2021
6T31
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BU of 6t31 by Molmil
Streptavidin variants harbouring an artificial organocatalyst based cofactor
Descriptor: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide, Streptavidin
Authors:Lechner, H, Hocker, B.
Deposit date:2019-10-10
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Chembiochem, 22, 2021
3SZJ
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BU of 3szj by Molmil
Structure of the shwanavidin-biotin complex
Descriptor: ACETIC ACID, Avidin/streptavidin, BIOTIN, ...
Authors:Livnah, O, Meir, A.
Deposit date:2011-07-19
Release date:2012-04-11
Last modified:2012-06-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Adaptation of a Thermostable Biotin-binding Protein in a Psychrophilic Environment.
J.Biol.Chem., 287, 2012
3T2W
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BU of 3t2w by Molmil
Crystal structure of shwanavidin (F43A) - biotin complex
Descriptor: Avidin/streptavidin, BIOTIN
Authors:Livnah, O, Meir, A.
Deposit date:2011-07-23
Release date:2012-04-11
Last modified:2016-10-12
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Adaptation of a Thermostable Biotin-binding Protein in a Psychrophilic Environment.
J.Biol.Chem., 287, 2012
3SZI
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BU of 3szi by Molmil
Structure of apo shwanavidin (P21 form)
Descriptor: Avidin/streptavidin, FORMIC ACID
Authors:Livnah, O, Meir, A.
Deposit date:2011-07-19
Release date:2012-04-25
Last modified:2012-06-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Adaptation of a Thermostable Biotin-binding Protein in a Psychrophilic Environment.
J.Biol.Chem., 287, 2012
6UIY
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BU of 6uiy by Molmil
Artificial Iron Proteins: Modelling the Active Sites in Non-Heme Dioxygenases
Descriptor: ACETATE ION, Streptavidin, {5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-N-(2-{[(pyridin-2-yl)methyl][(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)pentanamide}iron(2+)
Authors:Miller, K.R, Paretsky, J.D, Follmer, A.H, Heinisch, T, Mittra, K, Gul, S, Kim, I.-S, Fuller, F.D, Batyuk, A, Sutherlin, K.D, Brewster, A.S, Bhowmick, A, Sauter, N.K, Kern, J, Yano, J, Green, M.T, Ward, T.R, Borovik, A.S.
Deposit date:2019-10-01
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Artificial Iron Proteins: Modeling the Active Sites in Non-Heme Dioxygenases.
Inorg.Chem., 59, 2020
3RE6
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BU of 3re6 by Molmil
Crystal structure of R4-6 streptavidin
Descriptor: GLYCEROL, Streptavidin
Authors:Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
Deposit date:2011-04-02
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.823 Å)
Cite:Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
3T2X
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BU of 3t2x by Molmil
Structure of shwanavidin low affinity mutant (F43A)
Descriptor: Avidin/streptavidin
Authors:Livnah, O, Meir, A.
Deposit date:2011-07-23
Release date:2012-04-11
Last modified:2012-06-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural Adaptation of a Thermostable Biotin-binding Protein in a Psychrophilic Environment.
J.Biol.Chem., 287, 2012
3SZH
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BU of 3szh by Molmil
Crystal structure of apo shwanavidin (P1 form)
Descriptor: Avidin/streptavidin
Authors:Livnah, O, Meir, A.
Deposit date:2011-07-19
Release date:2012-04-11
Last modified:2012-06-13
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Structural Adaptation of a Thermostable Biotin-binding Protein in a Psychrophilic Environment.
J.Biol.Chem., 287, 2012
3RY2
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BU of 3ry2 by Molmil
Wild-type core streptavidin-biotin complex at atomic resolution
Descriptor: BIOTIN, GLYCEROL, Streptavidin
Authors:Stenkamp, R.E, Le Trong, I, Stayton, P.S, Lybrand, T.P.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Streptavidin and its biotin complex at atomic resolution.
Acta Crystallogr.,Sect.D, 67, 2011
3T6F
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BU of 3t6f by Molmil
Biotin complex of Y54F core streptavidin
Descriptor: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
Authors:Baugh, L, Le Trong, I, Cerutti, D.S, Mehta, N, Gulich, S, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3T6L
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BU of 3t6l by Molmil
Y54F mutant of core streptavidin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Streptavidin
Authors:Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3RDQ
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BU of 3rdq by Molmil
Crystal structure of R7-2 streptavidin complexed with desthiobiotin
Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, GLYCEROL, NICKEL (II) ION, ...
Authors:Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
Deposit date:2011-04-01
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
1HY2
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BU of 1hy2 by Molmil
MINIPROTEIN MP-1 COMPLEX WITH STREPTAVIDIN
Descriptor: MP-1, STREPTAVIDIN
Authors:Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
Deposit date:2001-01-17
Release date:2003-06-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-Protein Complexes
To be Published
1HXL
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BU of 1hxl by Molmil
MINIPROTEIN MP-2 (V10A) COMPLEX WITH STREPTAVIDIN
Descriptor: MP-2, STREPTAVIDIN
Authors:Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
Deposit date:2001-01-16
Release date:2003-06-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-Protein Complexes
To be Published
1HXZ
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BU of 1hxz by Molmil
MINIPROTEIN MP-2 COMPLEX WITH STREPTAVIDIN
Descriptor: MP-2, STREPTAVIDIN
Authors:Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
Deposit date:2001-01-17
Release date:2003-06-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-Protein Complexes
To be Published
1I9H
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BU of 1i9h by Molmil
CORE STREPTAVIDIN-BNA COMPLEX
Descriptor: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, STREPTAVIDIN
Authors:Livnah, O, Huberman, T, Wilchek, M, Bayer, E.A, Eisenberg-Domovich, Y.
Deposit date:2001-03-20
Release date:2001-09-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chicken avidin exhibits pseudo-catalytic properties. Biochemical, structural, and electrostatic consequences.
J.Biol.Chem., 276, 2001
1KL3
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BU of 1kl3 by Molmil
an engineered streptavidin with improved affinity for the strep-tag II peptide : SAm1-StrepII
Descriptor: strep-tag II peptide, streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-12-11
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002
1KFF
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BU of 1kff by Molmil
An engineered streptavidin with improved affinity for the strep-tag II peptide: apo-SAM1
Descriptor: streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-11-20
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002
1KL5
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BU of 1kl5 by Molmil
an engineered streptavidin with improved affinity for the strep-tag II peptide : SAm2-StrepII
Descriptor: strep-tag II, streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-12-11
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002

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